RNA–Protein interactions for RNA: ENST00000474289.6

ECHDC1-214, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene ECHDC1, Length 2,443 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-214ENST00000474289 GSTT1P30711 240 aa19.8■□□□□ 0.76
ECHDC1-214ENST00000474289 ADCY8P40145 1251 aa19.8■□□□□ 0.76
ECHDC1-214ENST00000474289 CAV1Q03135 178 aa19.8■□□□□ 0.76
ECHDC1-214ENST00000474289 SLC34A1Q06495 639 aa19.8■□□□□ 0.76
ECHDC1-214ENST00000474289 DDB1Q16531 1140 aa19.8■□□□□ 0.76
ECHDC1-214ENST00000474289 LRRC23Q53EV4 343 aaPredicted RBP19.8■□□□□ 0.76
ECHDC1-214ENST00000474289 OTOAQ7RTW8 1153 aa19.8■□□□□ 0.76
ECHDC1-214ENST00000474289 PTPRN2Q92932 1015 aa19.8■□□□□ 0.76
ECHDC1-214ENST00000474289 PCDHB18PQ96TA0 734 aa19.8■□□□□ 0.76
ECHDC1-214ENST00000474289 MKNK1Q9BUB5 465 aa19.8■□□□□ 0.76
ECHDC1-214ENST00000474289 NUP85Q9BW27 656 aa19.8■□□□□ 0.76
ECHDC1-214ENST00000474289 CYLDQ9NQC7 956 aa19.8■□□□□ 0.76
ECHDC1-214ENST00000474289 CDK5RAP2Q96SN8 1893 aa19.8■□□□□ 0.76
ECHDC1-214ENST00000474289 C2CD2LO14523 706 aa19.8■□□□□ 0.76
ECHDC1-214ENST00000474289 FGFR1P11362 822 aa19.8■□□□□ 0.76
ECHDC1-214ENST00000474289 NMT1P30419 496 aaKnown RBP19.8■□□□□ 0.76
ECHDC1-214ENST00000474289 EIF6P56537 245 aaKnown RBP19.8■□□□□ 0.76
ECHDC1-214ENST00000474289 ZNF804AQ7Z570 1209 aa19.8■□□□□ 0.76
ECHDC1-214ENST00000474289 SLFN12Q8IYM2 578 aa19.8■□□□□ 0.76
ECHDC1-214ENST00000474289 RIBC1Q8N443 379 aaPredicted RBP19.8■□□□□ 0.76
ECHDC1-214ENST00000474289 LINC00116Q8NCU8 138 aa19.8■□□□□ 0.76
ECHDC1-214ENST00000474289 DTX3LQ8TDB6 740 aa19.8■□□□□ 0.76
ECHDC1-214ENST00000474289 AZIN2Q96A70 460 aa19.8■□□□□ 0.76
ECHDC1-214ENST00000474289 NAP1L4Q99733 375 aaKnown RBP19.8■□□□□ 0.76
ECHDC1-214ENST00000474289 FAM192AQ9GZU8 254 aa19.8■□□□□ 0.76
ECHDC1-214ENST00000474289 DMAP1Q9NPF5 467 aaPredicted RBP19.8■□□□□ 0.76
ECHDC1-214ENST00000474289 OLFML3Q9NRN5 406 aa19.8■□□□□ 0.76
ECHDC1-214ENST00000474289 BCS1LQ9Y276 419 aa19.8■□□□□ 0.76
ECHDC1-214ENST00000474289 HNRNPCL1O60812 293 aaKnown RBP19.79■□□□□ 0.76
ECHDC1-214ENST00000474289 LGR5O75473 907 aa19.79■□□□□ 0.76
ECHDC1-214ENST00000474289 SNHG28P0DPA3 235 aa19.79■□□□□ 0.76
ECHDC1-214ENST00000474289 RRM1P23921 792 aa19.79■□□□□ 0.76
ECHDC1-214ENST00000474289 GCAP28676 217 aa19.79■□□□□ 0.76
ECHDC1-214ENST00000474289 RPA3P35244 121 aaPredicted RBP19.79■□□□□ 0.76
ECHDC1-214ENST00000474289 CYP2J2P51589 502 aa19.79■□□□□ 0.76
ECHDC1-214ENST00000474289 PLEKHG4Q58EX7 1191 aa19.79■□□□□ 0.76
ECHDC1-214ENST00000474289 CYP4F22Q6NT55 531 aa19.79■□□□□ 0.76
ECHDC1-214ENST00000474289 NBPF5PQ86XG9 351 aaPredicted RBP19.79■□□□□ 0.76
ECHDC1-214ENST00000474289 CLEC10AQ8IUN9 316 aa19.79■□□□□ 0.76
ECHDC1-214ENST00000474289 LMO3Q8TAP4 145 aa19.79■□□□□ 0.76
ECHDC1-214ENST00000474289 GBP5Q96PP8 586 aa19.79■□□□□ 0.76
ECHDC1-214ENST00000474289 RTFDC1Q9BY42 306 aaPredicted RBP19.79■□□□□ 0.76
ECHDC1-214ENST00000474289 NPHS2Q9NP85 383 aa19.79■□□□□ 0.76
ECHDC1-214ENST00000474289 TULP1O00294 542 aaPredicted RBP19.78■□□□□ 0.76
ECHDC1-214ENST00000474289 PSMG1O95456 288 aa19.78■□□□□ 0.76
ECHDC1-214ENST00000474289 BCRP11274 1271 aa19.78■□□□□ 0.76
ECHDC1-214ENST00000474289 BTDP43251 543 aa19.78■□□□□ 0.76
ECHDC1-214ENST00000474289 CYP4A11Q02928 519 aa19.78■□□□□ 0.76
ECHDC1-214ENST00000474289 CERKLQ49MI3 558 aaPredicted RBP19.78■□□□□ 0.76
ECHDC1-214ENST00000474289 TTBK2Q6IQ55 1244 aa19.78■□□□□ 0.76
ECHDC1-214ENST00000474289 SYDE1Q6ZW31 735 aaPredicted RBP19.78■□□□□ 0.76
ECHDC1-214ENST00000474289 SESTD1Q86VW0 696 aa19.78■□□□□ 0.76
ECHDC1-214ENST00000474289 KBTBD2Q8IY47 623 aa19.78■□□□□ 0.76
ECHDC1-214ENST00000474289 C4orf33Q8N1A6 199 aa19.78■□□□□ 0.76
ECHDC1-214ENST00000474289 WDR66Q8TBY9 1149 aa19.78■□□□□ 0.76
ECHDC1-214ENST00000474289 TRABDQ9H4I3 376 aa19.78■□□□□ 0.76
ECHDC1-214ENST00000474289 UBE2TQ9NPD8 197 aaPredicted RBP19.78■□□□□ 0.76
ECHDC1-214ENST00000474289 PDP2Q9P2J9 529 aa19.78■□□□□ 0.76
ECHDC1-214ENST00000474289 GSTTP1A0A1W2PQM5 241 aa19.78■□□□□ 0.76
ECHDC1-214ENST00000474289 CCDC22O60826 627 aa19.78■□□□□ 0.76
ECHDC1-214ENST00000474289 GAS8O95995 478 aa19.78■□□□□ 0.76
ECHDC1-214ENST00000474289 AP1B1Q10567 949 aa19.78■□□□□ 0.76
ECHDC1-214ENST00000474289 SLC1A5Q15758 541 aa19.78■□□□□ 0.76
ECHDC1-214ENST00000474289 ERMNQ8TAM6 284 aa19.78■□□□□ 0.76
ECHDC1-214ENST00000474289 ETNPPLQ8TBG4 499 aa19.78■□□□□ 0.76
ECHDC1-214ENST00000474289 BTBD10Q9BSF8 475 aa19.78■□□□□ 0.76
ECHDC1-214ENST00000474289 KIAA1586Q9HCI6 787 aa19.78■□□□□ 0.76
ECHDC1-214ENST00000474289 MTMR4Q9NYA4 1195 aa19.78■□□□□ 0.76
ECHDC1-214ENST00000474289 SRP68Q9UHB9 627 aaKnown RBP19.78■□□□□ 0.76
ECHDC1-214ENST00000474289 ZNF335Q9H4Z2 1342 aaPredicted RBP19.78■□□□□ 0.76
ECHDC1-214ENST00000474289 EXOC1LA0A1B0GW35 172 aa19.77■□□□□ 0.76
ECHDC1-214ENST00000474289 EXOC3O60645 756 aa19.77■□□□□ 0.76
ECHDC1-214ENST00000474289 GSTO1P78417 241 aa19.77■□□□□ 0.76
ECHDC1-214ENST00000474289 NFIL3Q16649 462 aa19.77■□□□□ 0.76
ECHDC1-214ENST00000474289 DTNBP1Q96EV8 351 aa19.77■□□□□ 0.76
ECHDC1-214ENST00000474289 HERPUD2Q9BSE4 406 aa19.77■□□□□ 0.76
ECHDC1-214ENST00000474289 OCEL1Q9H607 264 aa19.77■□□□□ 0.76
ECHDC1-214ENST00000474289 EIF3DO15371 548 aaKnown RBP eCLIP19.77■□□□□ 0.76
ECHDC1-214ENST00000474289 GSC2O15499 205 aa19.77■□□□□ 0.76
ECHDC1-214ENST00000474289 UBTFL6P0CB48 400 aaPredicted RBP19.77■□□□□ 0.76
ECHDC1-214ENST00000474289 RFX1P22670 979 aa19.77■□□□□ 0.76
ECHDC1-214ENST00000474289 SLC16A2P36021 539 aa19.77■□□□□ 0.76
ECHDC1-214ENST00000474289 NSMFQ6X4W1 530 aa19.77■□□□□ 0.76
ECHDC1-214ENST00000474289 ARHGEF19Q8IW93 802 aa19.77■□□□□ 0.76
ECHDC1-214ENST00000474289 WDR60Q8WVS4 1066 aa19.77■□□□□ 0.76
ECHDC1-214ENST00000474289 ZNF184Q99676 751 aaPredicted RBP19.77■□□□□ 0.76
ECHDC1-214ENST00000474289 DDX50Q9BQ39 737 aaKnown RBP19.77■□□□□ 0.76
ECHDC1-214ENST00000474289 KRT82Q9NSB4 513 aa19.77■□□□□ 0.76
ECHDC1-214ENST00000474289 STX18Q9P2W9 335 aaKnown RBP19.77■□□□□ 0.76
ECHDC1-214ENST00000474289 FRMD4BQ9Y2L6 1034 aa19.77■□□□□ 0.76
ECHDC1-214ENST00000474289 SBDSQ9Y3A5 250 aaKnown RBP eCLIP19.77■□□□□ 0.76
ECHDC1-214ENST00000474289 CYP3A7-CYP3A51PA0A087WV96 503 aa19.76■□□□□ 0.75
ECHDC1-214ENST00000474289 PYGBP11216 843 aa19.76■□□□□ 0.75
ECHDC1-214ENST00000474289 CA4P22748 312 aa19.76■□□□□ 0.75
ECHDC1-214ENST00000474289 CYP3A7P24462 503 aa19.76■□□□□ 0.75
ECHDC1-214ENST00000474289 PSMC4P43686 418 aa19.76■□□□□ 0.75
ECHDC1-214ENST00000474289 SLC18A1P54219 525 aa19.76■□□□□ 0.75
ECHDC1-214ENST00000474289 ZNF543Q08ER8 600 aa19.76■□□□□ 0.75
ECHDC1-214ENST00000474289 NR1H3Q13133 447 aa19.76■□□□□ 0.75
ECHDC1-214ENST00000474289 ZRSR2Q15696 482 aaKnown RBP19.76■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms