RNA–Protein interactions for RNA: ENST00000474047.5

VAMP4-203, Transcript of vesicle associated membrane protein 4, humanhuman

TSL 1 (best)

Gene VAMP4, Length 1,738 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-203ENST00000474047 CLEC1BQ9P126 229 aa15.49■□□□□ 0.07
VAMP4-203ENST00000474047 CNTN3Q9P232 1028 aa15.49■□□□□ 0.07
VAMP4-203ENST00000474047 USP25Q9UHP3 1055 aa15.49■□□□□ 0.07
VAMP4-203ENST00000474047 AGO2Q9UKV8 859 aaKnown RBP15.49■□□□□ 0.07
VAMP4-203ENST00000474047 TCHHQ07283 1943 aa15.49■□□□□ 0.07
VAMP4-203ENST00000474047 TRAPPC3O43617 180 aa15.48■□□□□ 0.07
VAMP4-203ENST00000474047 GLP2RO95838 553 aa15.48■□□□□ 0.07
VAMP4-203ENST00000474047 SLFN14P0C7P3 912 aa15.48■□□□□ 0.07
VAMP4-203ENST00000474047 TNFSF9P41273 254 aa15.48■□□□□ 0.07
VAMP4-203ENST00000474047 SYKP43405 635 aa15.48■□□□□ 0.07
VAMP4-203ENST00000474047 CLCNKBP51801 687 aa15.48■□□□□ 0.07
VAMP4-203ENST00000474047 SMAD4Q13485 552 aaKnown RBP15.48■□□□□ 0.07
VAMP4-203ENST00000474047 NAB2Q15742 525 aa15.48■□□□□ 0.07
VAMP4-203ENST00000474047 FAM171A1Q5VUB5 890 aa15.48■□□□□ 0.07
VAMP4-203ENST00000474047 VN1R2Q8NFZ6 395 aa15.48■□□□□ 0.07
VAMP4-203ENST00000474047 RIN2Q8WYP3 895 aaPredicted RBP15.48■□□□□ 0.07
VAMP4-203ENST00000474047 KIF12Q96FN5 646 aa15.48■□□□□ 0.07
VAMP4-203ENST00000474047 B3GALT6Q96L58 329 aa15.48■□□□□ 0.07
VAMP4-203ENST00000474047 ZMAT2Q96NC0 199 aaKnown RBP15.48■□□□□ 0.07
VAMP4-203ENST00000474047 KLHL5Q96PQ7 755 aa15.48■□□□□ 0.07
VAMP4-203ENST00000474047 TMEM206Q9H813 350 aa15.48■□□□□ 0.07
VAMP4-203ENST00000474047 GDPD2Q9HCC8 539 aa15.48■□□□□ 0.07
VAMP4-203ENST00000474047 HCFC2Q9Y5Z7 792 aa15.48■□□□□ 0.07
VAMP4-203ENST00000474047 REV3LO60673 3130 aa15.48■□□□□ 0.07
VAMP4-203ENST00000474047 XPOTO43592 962 aaKnown RBP15.48■□□□□ 0.07
VAMP4-203ENST00000474047 PPP1R37O75864 691 aa15.48■□□□□ 0.07
VAMP4-203ENST00000474047 PRPF6O94906 941 aaKnown RBP15.48■□□□□ 0.07
VAMP4-203ENST00000474047 ADH1AP07327 375 aa15.48■□□□□ 0.07
VAMP4-203ENST00000474047 CNPP09543 421 aaKnown RBP15.48■□□□□ 0.07
VAMP4-203ENST00000474047 IL9P15248 144 aa15.48■□□□□ 0.07
VAMP4-203ENST00000474047 HOXB8P17481 243 aaPredicted RBP15.48■□□□□ 0.07
VAMP4-203ENST00000474047 RPL9P32969 192 aaKnown RBP15.48■□□□□ 0.07
VAMP4-203ENST00000474047 ACOT2P49753 483 aa15.48■□□□□ 0.07
VAMP4-203ENST00000474047 DSG1Q02413 1049 aa15.48■□□□□ 0.07
VAMP4-203ENST00000474047 CREMQ03060 361 aa15.48■□□□□ 0.07
VAMP4-203ENST00000474047 SPAG1Q07617 926 aa15.48■□□□□ 0.07
VAMP4-203ENST00000474047 UPP1Q16831 310 aa15.48■□□□□ 0.07
VAMP4-203ENST00000474047 ANKRD54Q6NXT1 300 aa15.48■□□□□ 0.07
VAMP4-203ENST00000474047 SLC39A4Q6P5W5 647 aa15.48■□□□□ 0.07
VAMP4-203ENST00000474047 TMEM184AQ6ZMB5 413 aa15.48■□□□□ 0.07
VAMP4-203ENST00000474047 FSIP1Q8NA03 581 aa15.48■□□□□ 0.07
VAMP4-203ENST00000474047 NOC3LQ8WTT2 800 aaKnown RBP15.48■□□□□ 0.07
VAMP4-203ENST00000474047 C18orf25Q96B23 403 aaPredicted RBP15.48■□□□□ 0.07
VAMP4-203ENST00000474047 MSLNLQ96KJ4 702 aa15.48■□□□□ 0.07
VAMP4-203ENST00000474047 NECAB3Q96P71 396 aaPredicted RBP15.48■□□□□ 0.07
VAMP4-203ENST00000474047 TTPALQ9BTX7 342 aa15.48■□□□□ 0.07
VAMP4-203ENST00000474047 APOL5Q9BWW9 433 aa15.48■□□□□ 0.07
VAMP4-203ENST00000474047 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP15.48■□□□□ 0.07
VAMP4-203ENST00000474047 NUB1Q9Y5A7 615 aa15.48■□□□□ 0.07
VAMP4-203ENST00000474047 LACTBL1A8MY62 500 aa15.47■□□□□ 0.07
VAMP4-203ENST00000474047 TISP43B9A030 160 aa15.47■□□□□ 0.07
VAMP4-203ENST00000474047 PODXLO00592 558 aa15.47■□□□□ 0.07
VAMP4-203ENST00000474047 MBTPS2O43462 519 aa15.47■□□□□ 0.07
VAMP4-203ENST00000474047 ANP32AP39687 249 aaKnown RBP15.47■□□□□ 0.07
VAMP4-203ENST00000474047 CASP5P51878 434 aa15.47■□□□□ 0.07
VAMP4-203ENST00000474047 KCNA1Q09470 495 aa15.47■□□□□ 0.07
VAMP4-203ENST00000474047 FAM26FQ5R3K3 315 aa15.47■□□□□ 0.07
VAMP4-203ENST00000474047 ZBTB41Q5SVQ8 909 aa15.47■□□□□ 0.07
VAMP4-203ENST00000474047 KIAA0319Q5VV43 1072 aa15.47■□□□□ 0.07
VAMP4-203ENST00000474047 CNNM4Q6P4Q7 775 aa15.47■□□□□ 0.07
VAMP4-203ENST00000474047 ELMSAN1Q6PJG2 1045 aa15.47■□□□□ 0.07
VAMP4-203ENST00000474047 UNC13DQ70J99 1090 aa15.47■□□□□ 0.07
VAMP4-203ENST00000474047 CD302Q8IX05 232 aa15.47■□□□□ 0.07
VAMP4-203ENST00000474047 GRAMD1CQ8IYS0 662 aa15.47■□□□□ 0.07
VAMP4-203ENST00000474047 HPS3Q969F9 1004 aa15.47■□□□□ 0.07
VAMP4-203ENST00000474047 STRA6Q9BX79 667 aa15.47■□□□□ 0.07
VAMP4-203ENST00000474047 GTF3C5Q9Y5Q8 519 aaPredicted RBP15.47■□□□□ 0.07
VAMP4-203ENST00000474047 PVALEFA0A1B0GWK0 134 aa15.46■□□□□ 0.07
VAMP4-203ENST00000474047 A0A1W2PQ27 194 aa15.46■□□□□ 0.07
VAMP4-203ENST00000474047 A0A1W2PQ64 194 aa15.46■□□□□ 0.07
VAMP4-203ENST00000474047 A0A1W2PQD8 194 aa15.46■□□□□ 0.07
VAMP4-203ENST00000474047 TTC26A0AVF1 554 aa15.46■□□□□ 0.07
VAMP4-203ENST00000474047 CASP1P29466 404 aa15.46■□□□□ 0.07
VAMP4-203ENST00000474047 SSTR3P32745 418 aaPredicted RBP15.46■□□□□ 0.07
VAMP4-203ENST00000474047 SOX4Q06945 474 aaPredicted RBP15.46■□□□□ 0.07
VAMP4-203ENST00000474047 CUL4BQ13620 913 aa15.46■□□□□ 0.07
VAMP4-203ENST00000474047 ENOX2Q16206 610 aaKnown RBP15.46■□□□□ 0.07
VAMP4-203ENST00000474047 CES5AQ6NT32 575 aa15.46■□□□□ 0.07
VAMP4-203ENST00000474047 PDXDC1Q6P996 788 aa15.46■□□□□ 0.07
VAMP4-203ENST00000474047 GLYCTKQ8IVS8 523 aa15.46■□□□□ 0.07
VAMP4-203ENST00000474047 RNF168Q8IYW5 571 aaPredicted RBP15.46■□□□□ 0.07
VAMP4-203ENST00000474047 PAGE5Q96GU1 130 aa15.46■□□□□ 0.07
VAMP4-203ENST00000474047 CCDC34Q96HJ3 373 aa15.46■□□□□ 0.07
VAMP4-203ENST00000474047 TSPAN18Q96SJ8 248 aa15.46■□□□□ 0.07
VAMP4-203ENST00000474047 IKZF4Q9H2S9 585 aa15.46■□□□□ 0.07
VAMP4-203ENST00000474047 CHST7Q9NS84 486 aa15.46■□□□□ 0.07
VAMP4-203ENST00000474047 DZANK1Q9NVP4 752 aa15.46■□□□□ 0.07
VAMP4-203ENST00000474047 CPSF3Q9UKF6 684 aaKnown RBP15.46■□□□□ 0.07
VAMP4-203ENST00000474047 UBQLN1Q9UMX0 589 aaKnown RBP15.46■□□□□ 0.07
VAMP4-203ENST00000474047 STYXL1Q9Y6J8 313 aa15.46■□□□□ 0.07
VAMP4-203ENST00000474047 TMEM189-UBE2V1I3L0A0 370 aa15.46■□□□□ 0.06
VAMP4-203ENST00000474047 TEX28O15482 410 aa15.46■□□□□ 0.06
VAMP4-203ENST00000474047 ACTN4O43707 911 aaKnown RBP15.46■□□□□ 0.06
VAMP4-203ENST00000474047 LILRB3O75022 631 aa15.46■□□□□ 0.06
VAMP4-203ENST00000474047 EFEMP2O95967 443 aa15.46■□□□□ 0.06
VAMP4-203ENST00000474047 LDHAP00338 332 aaKnown RBP15.46■□□□□ 0.06
VAMP4-203ENST00000474047 EPCAMP16422 314 aa15.46■□□□□ 0.06
VAMP4-203ENST00000474047 NDUFA8P51970 172 aa15.46■□□□□ 0.06
VAMP4-203ENST00000474047 KCNC3Q14003 757 aa15.46■□□□□ 0.06
VAMP4-203ENST00000474047 PRSS55Q6UWB4 352 aaPredicted RBP15.46■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms