RNA–Protein interactions for RNA: ENST00000473421.1

TRAF4-209, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 585 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-209ENST00000473421 CDCA2Q69YH5 1023 aaPredicted RBP13.95□□□□□ -0.18
TRAF4-209ENST00000473421 HACE1Q8IYU2 909 aa13.95□□□□□ -0.18
TRAF4-209ENST00000473421 ATRIPQ8WXE1 791 aa13.95□□□□□ -0.18
TRAF4-209ENST00000473421 DDX27Q96GQ7 796 aaKnown RBP13.95□□□□□ -0.18
TRAF4-209ENST00000473421 ZSWIM3Q96MP5 696 aa13.95□□□□□ -0.18
TRAF4-209ENST00000473421 OSBPL6Q9BZF3 934 aa13.95□□□□□ -0.18
TRAF4-209ENST00000473421 CCDC113Q9H0I3 377 aa13.95□□□□□ -0.18
TRAF4-209ENST00000473421 TTC12Q9H892 705 aaPredicted RBP13.95□□□□□ -0.18
TRAF4-209ENST00000473421 PRMT8Q9NR22 394 aaPredicted RBP13.95□□□□□ -0.18
TRAF4-209ENST00000473421 MTRRQ9UBK8 725 aa13.95□□□□□ -0.18
TRAF4-209ENST00000473421 PCDHA12Q9UN75 941 aa13.95□□□□□ -0.18
TRAF4-209ENST00000473421 SPTLC1O15269 473 aa13.94□□□□□ -0.18
TRAF4-209ENST00000473421 XYLBO75191 536 aa13.94□□□□□ -0.18
TRAF4-209ENST00000473421 MED24O75448 989 aa13.94□□□□□ -0.18
TRAF4-209ENST00000473421 COL4A2P08572 1712 aa13.94□□□□□ -0.18
TRAF4-209ENST00000473421 MAP1BP46821 2468 aaKnown RBP13.94□□□□□ -0.18
TRAF4-209ENST00000473421 FOSBP53539 338 aa13.94□□□□□ -0.18
TRAF4-209ENST00000473421 CALCRLQ16602 461 aa13.94□□□□□ -0.18
TRAF4-209ENST00000473421 FAM187BQ17R55 369 aa13.94□□□□□ -0.18
TRAF4-209ENST00000473421 SLFN12Q8IYM2 578 aa13.94□□□□□ -0.18
TRAF4-209ENST00000473421 FAM177A1Q8N128 213 aaPredicted RBP13.94□□□□□ -0.18
TRAF4-209ENST00000473421 PPP1R10Q96QC0 940 aaKnown RBP13.94□□□□□ -0.18
TRAF4-209ENST00000473421 MTMR9Q96QG7 549 aa13.94□□□□□ -0.18
TRAF4-209ENST00000473421 PDRG1Q9NUG6 133 aa13.94□□□□□ -0.18
TRAF4-209ENST00000473421 NDRG2Q9UN36 371 aaKnown RBP13.94□□□□□ -0.18
TRAF4-209ENST00000473421 MRPS23Q9Y3D9 190 aaKnown RBP13.94□□□□□ -0.18
TRAF4-209ENST00000473421 ZMYM2Q9UBW7 1377 aa13.94□□□□□ -0.18
TRAF4-209ENST00000473421 BTBD18B2RXH4 712 aa13.93□□□□□ -0.18
TRAF4-209ENST00000473421 MEFVO15553 781 aaPredicted RBP13.93□□□□□ -0.18
TRAF4-209ENST00000473421 ECI2O75521 394 aa13.93□□□□□ -0.18
TRAF4-209ENST00000473421 B3GAT3O94766 335 aa13.93□□□□□ -0.18
TRAF4-209ENST00000473421 BAG4O95429 457 aaKnown RBP13.93□□□□□ -0.18
TRAF4-209ENST00000473421 LARGE1O95461 756 aa13.93□□□□□ -0.18
TRAF4-209ENST00000473421 SEC24AO95486 1093 aa13.93□□□□□ -0.18
TRAF4-209ENST00000473421 DMWDQ09019 674 aa13.93□□□□□ -0.18
TRAF4-209ENST00000473421 GAS6Q14393 721 aa13.93□□□□□ -0.18
TRAF4-209ENST00000473421 WDR44Q5JSH3 913 aa13.93□□□□□ -0.18
TRAF4-209ENST00000473421 FAM78AQ5JUQ0 283 aa13.93□□□□□ -0.18
TRAF4-209ENST00000473421 PRSS36Q5K4E3 855 aa13.93□□□□□ -0.18
TRAF4-209ENST00000473421 NT5DC1Q5TFE4 455 aa13.93□□□□□ -0.18
TRAF4-209ENST00000473421 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.93□□□□□ -0.18
TRAF4-209ENST00000473421 CATSPER3Q86XQ3 398 aa13.93□□□□□ -0.18
TRAF4-209ENST00000473421 CEP120Q8N960 986 aa13.93□□□□□ -0.18
TRAF4-209ENST00000473421 NECAB1Q8N987 351 aa13.93□□□□□ -0.18
TRAF4-209ENST00000473421 PRMT7Q9NVM4 692 aaPredicted RBP13.93□□□□□ -0.18
TRAF4-209ENST00000473421 ORC3Q9UBD5 711 aaPredicted RBP13.93□□□□□ -0.18
TRAF4-209ENST00000473421 KCNH3Q9ULD8 1083 aa13.93□□□□□ -0.18
TRAF4-209ENST00000473421 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.93□□□□□ -0.18
TRAF4-209ENST00000473421 STK36Q9NRP7 1315 aa13.92□□□□□ -0.18
TRAF4-209ENST00000473421 PFKFB2O60825 505 aa13.92□□□□□ -0.18
TRAF4-209ENST00000473421 MOSPD3O75425 235 aa13.92□□□□□ -0.18
TRAF4-209ENST00000473421 PRKCBP05771 671 aa13.92□□□□□ -0.18
TRAF4-209ENST00000473421 POU2F2P09086 479 aa13.92□□□□□ -0.18
TRAF4-209ENST00000473421 GJA1P17302 382 aa13.92□□□□□ -0.18
TRAF4-209ENST00000473421 ATP2B1P20020 1258 aa13.92□□□□□ -0.18
TRAF4-209ENST00000473421 RPS9P46781 194 aaKnown RBP13.92□□□□□ -0.18
TRAF4-209ENST00000473421 PFKPQ01813 784 aa13.92□□□□□ -0.18
TRAF4-209ENST00000473421 ROR1Q01973 937 aa13.92□□□□□ -0.18
TRAF4-209ENST00000473421 ADCY1Q08828 1119 aa13.92□□□□□ -0.18
TRAF4-209ENST00000473421 SPEM2Q0P670 501 aa13.92□□□□□ -0.18
TRAF4-209ENST00000473421 SRSF5Q13243 272 aaKnown RBP13.92□□□□□ -0.18
TRAF4-209ENST00000473421 PRPF4BQ13523 1007 aaKnown RBP13.92□□□□□ -0.18
TRAF4-209ENST00000473421 UPP1Q16831 310 aa13.92□□□□□ -0.18
TRAF4-209ENST00000473421 UVSSAQ2YD98 709 aa13.92□□□□□ -0.18
TRAF4-209ENST00000473421 HS6ST3Q8IZP7 471 aa13.92□□□□□ -0.18
TRAF4-209ENST00000473421 TM6SF1Q9BZW5 370 aa13.92□□□□□ -0.18
TRAF4-209ENST00000473421 C2orf42Q9NWW7 574 aa13.92□□□□□ -0.18
TRAF4-209ENST00000473421 USP18Q9UMW8 372 aa13.92□□□□□ -0.18
TRAF4-209ENST00000473421 WDR27A2RRH5 827 aa13.91□□□□□ -0.18
TRAF4-209ENST00000473421 N4BP3O15049 544 aa13.91□□□□□ -0.18
TRAF4-209ENST00000473421 TBC1D4O60343 1298 aa13.91□□□□□ -0.18
TRAF4-209ENST00000473421 REC8O95072 547 aa13.91□□□□□ -0.18
TRAF4-209ENST00000473421 VIPR2P41587 438 aa13.91□□□□□ -0.18
TRAF4-209ENST00000473421 ARPP19P56211 112 aa13.91□□□□□ -0.18
TRAF4-209ENST00000473421 ECM1Q16610 540 aa13.91□□□□□ -0.18
TRAF4-209ENST00000473421 CPLX2Q6PUV4 134 aaKnown RBP13.91□□□□□ -0.18
TRAF4-209ENST00000473421 ZNF852Q6ZMS4 543 aa13.91□□□□□ -0.18
TRAF4-209ENST00000473421 GPIHBP1Q8IV16 184 aa13.91□□□□□ -0.18
TRAF4-209ENST00000473421 RSPRY1Q96DX4 576 aa13.91□□□□□ -0.18
TRAF4-209ENST00000473421 PRIMPOLQ96LW4 560 aa13.91□□□□□ -0.18
TRAF4-209ENST00000473421 ZMAT2Q96NC0 199 aaKnown RBP13.91□□□□□ -0.18
TRAF4-209ENST00000473421 CORO1BQ9BR76 489 aa13.91□□□□□ -0.18
TRAF4-209ENST00000473421 CDV3Q9UKY7 258 aaKnown RBP13.91□□□□□ -0.18
TRAF4-209ENST00000473421 BACE2Q9Y5Z0 518 aa13.91□□□□□ -0.18
TRAF4-209ENST00000473421 TICRRQ7Z2Z1 1910 aa13.91□□□□□ -0.18
TRAF4-209ENST00000473421 CHD8Q9HCK8 2581 aa13.91□□□□□ -0.18
TRAF4-209ENST00000473421 SMIM28A0A1B0GU29 152 aa13.9□□□□□ -0.18
TRAF4-209ENST00000473421 ARHGEF37A1IGU5 675 aa13.9□□□□□ -0.18
TRAF4-209ENST00000473421 TMEM189-UBE2V1I3L0A0 370 aa13.9□□□□□ -0.18
TRAF4-209ENST00000473421 ACKR2O00590 384 aa13.9□□□□□ -0.18
TRAF4-209ENST00000473421 GDF9O60383 454 aa13.9□□□□□ -0.18
TRAF4-209ENST00000473421 ABLIM3O94929 683 aa13.9□□□□□ -0.18
TRAF4-209ENST00000473421 KRT2P35908 639 aa13.9□□□□□ -0.18
TRAF4-209ENST00000473421 SATB1Q01826 763 aa13.9□□□□□ -0.18
TRAF4-209ENST00000473421 ELAVL2Q12926 359 aaKnown RBP13.9□□□□□ -0.18
TRAF4-209ENST00000473421 PADI6Q6TGC4 694 aa13.9□□□□□ -0.18
TRAF4-209ENST00000473421 VITQ6UXI7 678 aa13.9□□□□□ -0.18
TRAF4-209ENST00000473421 MAP4K3Q8IVH8 894 aa13.9□□□□□ -0.18
TRAF4-209ENST00000473421 ELSPBP1Q96BH3 223 aa13.9□□□□□ -0.18
TRAF4-209ENST00000473421 CCDC43Q96MW1 224 aaKnown RBP13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms