RNA–Protein interactions for RNA: ENST00000473375.1

FXR1-210, Transcript of FMR1 autosomal homolog 1, humanhuman

TSL 3

Gene FXR1, Length 483 nt, Biotype retained intron, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXR1-210ENST00000473375 NIPSNAP3AQ9UFN0 247 aaPredicted RBP4.39□□□□□ -1.71
FXR1-210ENST00000473375 SLC23A1Q9UHI7 598 aa4.39□□□□□ -1.71
FXR1-210ENST00000473375 ACTL7AQ9Y615 435 aa4.39□□□□□ -1.71
FXR1-210ENST00000473375 HS3ST4Q9Y661 456 aa4.39□□□□□ -1.71
FXR1-210ENST00000473375 MYBBP1AQ9BQG0 1328 aaKnown RBP4.39□□□□□ -1.71
FXR1-210ENST00000473375 TMEM200CA6NKL6 621 aa4.38□□□□□ -1.71
FXR1-210ENST00000473375 RPS6KA4O75676 772 aa4.38□□□□□ -1.71
FXR1-210ENST00000473375 RPLP2P05387 115 aaKnown RBP4.38□□□□□ -1.71
FXR1-210ENST00000473375 HLA-DOAP06340 250 aa4.38□□□□□ -1.71
FXR1-210ENST00000473375 ALAS1P13196 640 aa4.38□□□□□ -1.71
FXR1-210ENST00000473375 FPR1P21462 350 aa4.38□□□□□ -1.71
FXR1-210ENST00000473375 EDNRBP24530 442 aa4.38□□□□□ -1.71
FXR1-210ENST00000473375 PTTG1IPP53801 180 aa4.38□□□□□ -1.71
FXR1-210ENST00000473375 RAP2BP61225 183 aa4.38□□□□□ -1.71
FXR1-210ENST00000473375 IGBP1P78318 339 aa4.38□□□□□ -1.71
FXR1-210ENST00000473375 RAB39AQ14964 217 aa4.38□□□□□ -1.71
FXR1-210ENST00000473375 ODF1Q14990 250 aa4.38□□□□□ -1.71
FXR1-210ENST00000473375 BEAN1Q3B7T3 259 aa4.38□□□□□ -1.71
FXR1-210ENST00000473375 DACT2Q5SW24 774 aa4.38□□□□□ -1.71
FXR1-210ENST00000473375 ULK2Q8IYT8 1036 aa4.38□□□□□ -1.71
FXR1-210ENST00000473375 ZGPATQ8N5A5 531 aaKnown RBP4.38□□□□□ -1.71
FXR1-210ENST00000473375 NLGN4YQ8NFZ3 816 aaPredicted RBP4.38□□□□□ -1.71
FXR1-210ENST00000473375 SMAD5Q99717 465 aaKnown RBP4.38□□□□□ -1.71
FXR1-210ENST00000473375 PRRX2Q99811 253 aa4.38□□□□□ -1.71
FXR1-210ENST00000473375 C11orf54Q9H0W9 315 aaPredicted RBP4.38□□□□□ -1.71
FXR1-210ENST00000473375 ZNF768Q9H5H4 540 aaKnown RBP4.38□□□□□ -1.71
FXR1-210ENST00000473375 TCF7L1Q9HCS4 588 aa4.38□□□□□ -1.71
FXR1-210ENST00000473375 CALCOCO1Q9P1Z2 691 aa4.38□□□□□ -1.71
FXR1-210ENST00000473375 LIMCH1Q9UPQ0 1083 aa4.38□□□□□ -1.71
FXR1-210ENST00000473375 ATP11BQ9Y2G3 1177 aa4.38□□□□□ -1.71
FXR1-210ENST00000473375 CFAP20Q9Y6A4 193 aaKnown RBP4.38□□□□□ -1.71
FXR1-210ENST00000473375 FPGT-TNNI3KV9GXZ4 949 aa4.38□□□□□ -1.71
FXR1-210ENST00000473375 CCDC154A6NI56 674 aa4.37□□□□□ -1.71
FXR1-210ENST00000473375 MARCH11A6NNE9 402 aa4.37□□□□□ -1.71
FXR1-210ENST00000473375 SNUPNO95149 360 aaKnown RBP4.37□□□□□ -1.71
FXR1-210ENST00000473375 ZRANB2O95218 330 aaKnown RBP eCLIP4.37□□□□□ -1.71
FXR1-210ENST00000473375 SLPIP03973 132 aa4.37□□□□□ -1.71
FXR1-210ENST00000473375 GCSHP23434 173 aa4.37□□□□□ -1.71
FXR1-210ENST00000473375 ZFP36P26651 326 aaKnown RBP4.37□□□□□ -1.71
FXR1-210ENST00000473375 NEK2P51955 445 aa4.37□□□□□ -1.71
FXR1-210ENST00000473375 FAM189BP81408 668 aa4.37□□□□□ -1.71
FXR1-210ENST00000473375 PURAQ00577 322 aaKnown RBP4.37□□□□□ -1.71
FXR1-210ENST00000473375 KLF10Q13118 480 aa4.37□□□□□ -1.71
FXR1-210ENST00000473375 TARDBPQ13148 414 aaKnown RBP eCLIP4.37□□□□□ -1.71
FXR1-210ENST00000473375 TIGD2Q4W5G0 525 aa4.37□□□□□ -1.71
FXR1-210ENST00000473375 PDCD4Q53EL6 469 aaKnown RBP4.37□□□□□ -1.71
FXR1-210ENST00000473375 LY6G5CQ5SRR4 150 aa4.37□□□□□ -1.71
FXR1-210ENST00000473375 ZNF529Q6P280 563 aa4.37□□□□□ -1.71
FXR1-210ENST00000473375 MED25Q71SY5 747 aa4.37□□□□□ -1.71
FXR1-210ENST00000473375 TTC7BQ86TV6 843 aa4.37□□□□□ -1.71
FXR1-210ENST00000473375 RSPH3Q86UC2 560 aa4.37□□□□□ -1.71
FXR1-210ENST00000473375 CMTR2Q8IYT2 770 aaKnown RBP4.37□□□□□ -1.71
FXR1-210ENST00000473375 MIER2Q8N344 545 aa4.37□□□□□ -1.71
FXR1-210ENST00000473375 IFI44Q8TCB0 444 aa4.37□□□□□ -1.71
FXR1-210ENST00000473375 LARP4BQ92615 738 aaKnown RBP4.37□□□□□ -1.71
FXR1-210ENST00000473375 MRGPRX4Q96LA9 322 aa4.37□□□□□ -1.71
FXR1-210ENST00000473375 NEU1Q99519 415 aa4.37□□□□□ -1.71
FXR1-210ENST00000473375 KLHL11Q9NVR0 708 aa4.37□□□□□ -1.71
FXR1-210ENST00000473375 DKK2Q9UBU2 259 aa4.37□□□□□ -1.71
FXR1-210ENST00000473375 USP15Q9Y4E8 981 aaPredicted RBP4.37□□□□□ -1.71
FXR1-210ENST00000473375 LOC105371045A0A1W2PR82 267 aa4.36□□□□□ -1.71
FXR1-210ENST00000473375 ZNF185O15231 689 aa4.36□□□□□ -1.71
FXR1-210ENST00000473375 NCR1O76036 304 aa4.36□□□□□ -1.71
FXR1-210ENST00000473375 ABHD16AO95870 558 aa4.36□□□□□ -1.71
FXR1-210ENST00000473375 CFIP05156 583 aa4.36□□□□□ -1.71
FXR1-210ENST00000473375 MTHFD1P11586 935 aaKnown RBP4.36□□□□□ -1.71
FXR1-210ENST00000473375 VCAM1P19320 739 aa4.36□□□□□ -1.71
FXR1-210ENST00000473375 MXRA7P84157 204 aa4.36□□□□□ -1.71
FXR1-210ENST00000473375 CREMQ03060 361 aa4.36□□□□□ -1.71
FXR1-210ENST00000473375 DPTQ07507 201 aa4.36□□□□□ -1.71
FXR1-210ENST00000473375 FHL2Q14192 279 aa4.36□□□□□ -1.71
FXR1-210ENST00000473375 PTPAQ15257 358 aa4.36□□□□□ -1.71
FXR1-210ENST00000473375 UAP1L1Q3KQV9 507 aa4.36□□□□□ -1.71
FXR1-210ENST00000473375 C3orf36Q3SXR2 165 aa4.36□□□□□ -1.71
FXR1-210ENST00000473375 KCNV1Q6PIU1 500 aa4.36□□□□□ -1.71
FXR1-210ENST00000473375 ZBTB46Q86UZ6 589 aa4.36□□□□□ -1.71
FXR1-210ENST00000473375 ARHGEF19Q8IW93 802 aa4.36□□□□□ -1.71
FXR1-210ENST00000473375 ZFPM1Q8IX07 1006 aa4.36□□□□□ -1.71
FXR1-210ENST00000473375 CPA6Q8N4T0 437 aa4.36□□□□□ -1.71
FXR1-210ENST00000473375 OR56A1Q8NGH5 318 aa4.36□□□□□ -1.71
FXR1-210ENST00000473375 PROKR1Q8TCW9 393 aa4.36□□□□□ -1.71
FXR1-210ENST00000473375 NSUN6Q8TEA1 469 aaKnown RBP4.36□□□□□ -1.71
FXR1-210ENST00000473375 NEU4Q8WWR8 484 aaPredicted RBP4.36□□□□□ -1.71
FXR1-210ENST00000473375 TMX3Q96JJ7 454 aa4.36□□□□□ -1.71
FXR1-210ENST00000473375 CEP89Q96ST8 783 aa4.36□□□□□ -1.71
FXR1-210ENST00000473375 NUP88Q99567 741 aaPredicted RBP4.36□□□□□ -1.71
FXR1-210ENST00000473375 MYOCQ99972 504 aa4.36□□□□□ -1.71
FXR1-210ENST00000473375 FBXO34Q9NWN3 711 aa4.36□□□□□ -1.71
FXR1-210ENST00000473375 DDX56Q9NY93 547 aaKnown RBP4.36□□□□□ -1.71
FXR1-210ENST00000473375 SERPINB13Q9UIV8 391 aa4.36□□□□□ -1.71
FXR1-210ENST00000473375 PCDHB1Q9Y5F3 818 aa4.36□□□□□ -1.71
FXR1-210ENST00000473375 PCDHA13Q9Y5I0 950 aa4.36□□□□□ -1.71
FXR1-210ENST00000473375 CENPVL1A0A0U1RR11 272 aa4.35□□□□□ -1.71
FXR1-210ENST00000473375 TMEM191CA6NGB0 347 aa4.35□□□□□ -1.71
FXR1-210ENST00000473375 PDGFRBP09619 1106 aa4.35□□□□□ -1.71
FXR1-210ENST00000473375 CKBP12277 381 aa4.35□□□□□ -1.71
FXR1-210ENST00000473375 INHBCP55103 352 aa4.35□□□□□ -1.71
FXR1-210ENST00000473375 TGFB2P61812 414 aa4.35□□□□□ -1.71
FXR1-210ENST00000473375 TAP1Q03518 808 aa4.35□□□□□ -1.71
FXR1-210ENST00000473375 TLE1Q04724 770 aa4.35□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms