RNA–Protein interactions for RNA: ENST00000472892.1

VTI1A-203, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 1 (best)

Gene VTI1A, Length 1,247 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-203ENST00000472892 MRE11P49959 708 aa16.76■□□□□ 0.27
VTI1A-203ENST00000472892 SMTNP53814 917 aa16.76■□□□□ 0.27
VTI1A-203ENST00000472892 OSTNP61366 133 aa16.76■□□□□ 0.27
VTI1A-203ENST00000472892 SOX4Q06945 474 aaPredicted RBP16.76■□□□□ 0.27
VTI1A-203ENST00000472892 RAD51AP2Q09MP3 1159 aa16.76■□□□□ 0.27
VTI1A-203ENST00000472892 RAB33AQ14088 237 aa16.76■□□□□ 0.27
VTI1A-203ENST00000472892 MPZL3Q6UWV2 235 aa16.76■□□□□ 0.27
VTI1A-203ENST00000472892 TMEM161BQ8NDZ6 487 aa16.76■□□□□ 0.27
VTI1A-203ENST00000472892 DDX27Q96GQ7 796 aaKnown RBP16.76■□□□□ 0.27
VTI1A-203ENST00000472892 ACAP3Q96P50 834 aa16.76■□□□□ 0.27
VTI1A-203ENST00000472892 MYADMQ96S97 322 aa16.76■□□□□ 0.27
VTI1A-203ENST00000472892 TCHPQ9BT92 498 aa16.76■□□□□ 0.27
VTI1A-203ENST00000472892 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.76■□□□□ 0.27
VTI1A-203ENST00000472892 MTCL1Q9Y4B5 1905 aaKnown RBP16.75■□□□□ 0.27
VTI1A-203ENST00000472892 TRAPPC3O43617 180 aa16.75■□□□□ 0.27
VTI1A-203ENST00000472892 TOM1L1O75674 476 aa16.75■□□□□ 0.27
VTI1A-203ENST00000472892 HNRNPA1P09651 372 aaKnown RBP eCLIP16.75■□□□□ 0.27
VTI1A-203ENST00000472892 MAPTP10636 758 aaKnown RBP16.75■□□□□ 0.27
VTI1A-203ENST00000472892 KCNE1P15382 129 aa16.75■□□□□ 0.27
VTI1A-203ENST00000472892 STRN3Q13033 797 aa16.75■□□□□ 0.27
VTI1A-203ENST00000472892 ARSHQ5FYA8 562 aa16.75■□□□□ 0.27
VTI1A-203ENST00000472892 C3orf58Q8NDZ4 430 aa16.75■□□□□ 0.27
VTI1A-203ENST00000472892 KCNN1Q92952 543 aa16.75■□□□□ 0.27
VTI1A-203ENST00000472892 NXPE3Q969Y0 559 aa16.75■□□□□ 0.27
VTI1A-203ENST00000472892 CDK5RAP3Q96JB5 506 aa16.75■□□□□ 0.27
VTI1A-203ENST00000472892 ZBTB45Q96K62 511 aaPredicted RBP16.75■□□□□ 0.27
VTI1A-203ENST00000472892 ZMAT2Q96NC0 199 aaKnown RBP16.75■□□□□ 0.27
VTI1A-203ENST00000472892 GOLGA2P5Q9HBQ8 144 aa16.75■□□□□ 0.27
VTI1A-203ENST00000472892 SLC38A7Q9NVC3 462 aa16.75■□□□□ 0.27
VTI1A-203ENST00000472892 DUSP12Q9UNI6 340 aa16.75■□□□□ 0.27
VTI1A-203ENST00000472892 BACE2Q9Y5Z0 518 aa16.75■□□□□ 0.27
VTI1A-203ENST00000472892 KMT2EQ8IZD2 1858 aa16.75■□□□□ 0.27
VTI1A-203ENST00000472892 MEFVO15553 781 aaPredicted RBP16.74■□□□□ 0.27
VTI1A-203ENST00000472892 LAMP2P13473 410 aa16.74■□□□□ 0.27
VTI1A-203ENST00000472892 HOXA9P31269 272 aa16.74■□□□□ 0.27
VTI1A-203ENST00000472892 OR1D2P34982 312 aa16.74■□□□□ 0.27
VTI1A-203ENST00000472892 CLCN5P51795 746 aa16.74■□□□□ 0.27
VTI1A-203ENST00000472892 UVSSAQ2YD98 709 aa16.74■□□□□ 0.27
VTI1A-203ENST00000472892 ASTLQ6HA08 431 aaPredicted RBP16.74■□□□□ 0.27
VTI1A-203ENST00000472892 ZPBP2Q6X784 338 aa16.74■□□□□ 0.27
VTI1A-203ENST00000472892 BRAPQ7Z569 592 aa16.74■□□□□ 0.27
VTI1A-203ENST00000472892 TMEM105Q8N8V8 129 aa16.74■□□□□ 0.27
VTI1A-203ENST00000472892 RSAD2Q8WXG1 361 aa16.74■□□□□ 0.27
VTI1A-203ENST00000472892 SNX27Q96L92 541 aa16.74■□□□□ 0.27
VTI1A-203ENST00000472892 CNTN3Q9P232 1028 aa16.74■□□□□ 0.27
VTI1A-203ENST00000472892 MTRRQ9UBK8 725 aa16.74■□□□□ 0.27
VTI1A-203ENST00000472892 NPHP3-ACAD11A0A0J9YXS1 232 aa16.73■□□□□ 0.27
VTI1A-203ENST00000472892 BMP15O95972 392 aa16.73■□□□□ 0.27
VTI1A-203ENST00000472892 C8AP07357 584 aa16.73■□□□□ 0.27
VTI1A-203ENST00000472892 POU2F2P09086 479 aa16.73■□□□□ 0.27
VTI1A-203ENST00000472892 TKTP29401 623 aaKnown RBP16.73■□□□□ 0.27
VTI1A-203ENST00000472892 RPL9P32969 192 aaKnown RBP16.73■□□□□ 0.27
VTI1A-203ENST00000472892 UBA7P41226 1012 aa16.73■□□□□ 0.27
VTI1A-203ENST00000472892 BRCC3P46736 316 aa16.73■□□□□ 0.27
VTI1A-203ENST00000472892 CUL4AQ13619 759 aa16.73■□□□□ 0.27
VTI1A-203ENST00000472892 SLC10A6Q3KNW5 377 aa16.73■□□□□ 0.27
VTI1A-203ENST00000472892 PPM1LQ5SGD2 360 aa16.73■□□□□ 0.27
VTI1A-203ENST00000472892 LIN9Q5TKA1 542 aa16.73■□□□□ 0.27
VTI1A-203ENST00000472892 RSPO2Q6UXX9 243 aaPredicted RBP16.73■□□□□ 0.27
VTI1A-203ENST00000472892 ANKS3Q6ZW76 656 aa16.73■□□□□ 0.27
VTI1A-203ENST00000472892 RTL10Q7L3V2 364 aa16.73■□□□□ 0.27
VTI1A-203ENST00000472892 SLC44A3Q8N4M1 653 aa16.73■□□□□ 0.27
VTI1A-203ENST00000472892 PHOX2BQ99453 314 aa16.73■□□□□ 0.27
VTI1A-203ENST00000472892 IRF2BPLQ9H1B7 796 aa16.73■□□□□ 0.27
VTI1A-203ENST00000472892 LARSQ9P2J5 1176 aaKnown RBP16.73■□□□□ 0.27
VTI1A-203ENST00000472892 ZFP37Q9Y6Q3 630 aaPredicted RBP16.73■□□□□ 0.27
VTI1A-203ENST00000472892 ANHXE9PGG2 379 aa16.72■□□□□ 0.27
VTI1A-203ENST00000472892 H0YCG3 227 aa16.72■□□□□ 0.27
VTI1A-203ENST00000472892 I3L4J1 428 aa16.72■□□□□ 0.27
VTI1A-203ENST00000472892 PODXLO00592 558 aa16.72■□□□□ 0.27
VTI1A-203ENST00000472892 GALR2O43603 387 aaPredicted RBP16.72■□□□□ 0.27
VTI1A-203ENST00000472892 NARSO43776 548 aaKnown RBP16.72■□□□□ 0.27
VTI1A-203ENST00000472892 NPR3P17342 541 aa16.72■□□□□ 0.27
VTI1A-203ENST00000472892 FSHRP23945 695 aa16.72■□□□□ 0.27
VTI1A-203ENST00000472892 LONP1P36776 959 aaKnown RBP16.72■□□□□ 0.27
VTI1A-203ENST00000472892 NCKAP1LP55160 1127 aa16.72■□□□□ 0.27
VTI1A-203ENST00000472892 MCL1Q07820 350 aa16.72■□□□□ 0.27
VTI1A-203ENST00000472892 AXDND1Q5T1B0 1012 aaPredicted RBP16.72■□□□□ 0.27
VTI1A-203ENST00000472892 GRASPQ7Z6J2 395 aaPredicted RBP16.72■□□□□ 0.27
VTI1A-203ENST00000472892 LRRC15Q8TF66 581 aa16.72■□□□□ 0.27
VTI1A-203ENST00000472892 CALML4Q96GE6 196 aa16.72■□□□□ 0.27
VTI1A-203ENST00000472892 MFSD1Q9H3U5 465 aa16.72■□□□□ 0.27
VTI1A-203ENST00000472892 WNT16Q9UBV4 365 aa16.72■□□□□ 0.27
VTI1A-203ENST00000472892 ODF2LQ9ULJ1 636 aa16.72■□□□□ 0.27
VTI1A-203ENST00000472892 CDY1Q9Y6F8 540 aa16.72■□□□□ 0.27
VTI1A-203ENST00000472892 VWA8A3KMH1 1905 aa16.71■□□□□ 0.27
VTI1A-203ENST00000472892 CLDN3O15551 220 aa16.71■□□□□ 0.27
VTI1A-203ENST00000472892 TBC1D4O60343 1298 aa16.71■□□□□ 0.27
VTI1A-203ENST00000472892 HARSP12081 509 aaKnown RBP16.71■□□□□ 0.27
VTI1A-203ENST00000472892 SCP2P22307 547 aa16.71■□□□□ 0.27
VTI1A-203ENST00000472892 GRIN1Q05586 938 aa16.71■□□□□ 0.27
VTI1A-203ENST00000472892 NOLC1Q14978 699 aaKnown RBP eCLIP16.71■□□□□ 0.27
VTI1A-203ENST00000472892 SF3A1Q15459 793 aaKnown RBP16.71■□□□□ 0.27
VTI1A-203ENST00000472892 SLC8B1Q6J4K2 584 aa16.71■□□□□ 0.27
VTI1A-203ENST00000472892 GET4Q7L5D6 327 aaPredicted RBP16.71■□□□□ 0.27
VTI1A-203ENST00000472892 HAUS6Q7Z4H7 955 aa16.71■□□□□ 0.27
VTI1A-203ENST00000472892 SLC7A14Q8TBB6 771 aa16.71■□□□□ 0.27
VTI1A-203ENST00000472892 C18orf25Q96B23 403 aaPredicted RBP16.71■□□□□ 0.27
VTI1A-203ENST00000472892 REEP2Q9BRK0 252 aa16.71■□□□□ 0.27
VTI1A-203ENST00000472892 HAPLN2Q9GZV7 340 aa16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms