RNA–Protein interactions for RNA: ENST00000471978.5

C9orf3-213, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-213ENST00000471978 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP24.7■■□□□ 1.54
C9orf3-213ENST00000471978 ABLIM1O14639 778 aa24.69■■□□□ 1.54
C9orf3-213ENST00000471978 TRAPPC3O43617 180 aa24.69■■□□□ 1.54
C9orf3-213ENST00000471978 PLA2G4BP0C869 781 aa24.69■■□□□ 1.54
C9orf3-213ENST00000471978 HARSP12081 509 aaKnown RBP24.69■■□□□ 1.54
C9orf3-213ENST00000471978 SMTNP53814 917 aa24.69■■□□□ 1.54
C9orf3-213ENST00000471978 SOX4Q06945 474 aaPredicted RBP24.69■■□□□ 1.54
C9orf3-213ENST00000471978 PPM1LQ5SGD2 360 aa24.69■■□□□ 1.54
C9orf3-213ENST00000471978 GET4Q7L5D6 327 aaPredicted RBP24.69■■□□□ 1.54
C9orf3-213ENST00000471978 TMEM105Q8N8V8 129 aa24.69■■□□□ 1.54
C9orf3-213ENST00000471978 C3orf58Q8NDZ4 430 aa24.69■■□□□ 1.54
C9orf3-213ENST00000471978 TMEM161BQ8NDZ6 487 aa24.69■■□□□ 1.54
C9orf3-213ENST00000471978 DDX27Q96GQ7 796 aaKnown RBP24.69■■□□□ 1.54
C9orf3-213ENST00000471978 ZBTB45Q96K62 511 aaPredicted RBP24.69■■□□□ 1.54
C9orf3-213ENST00000471978 SNX27Q96L92 541 aa24.69■■□□□ 1.54
C9orf3-213ENST00000471978 SLC38A7Q9NVC3 462 aa24.69■■□□□ 1.54
C9orf3-213ENST00000471978 KCND2Q9NZV8 630 aa24.69■■□□□ 1.54
C9orf3-213ENST00000471978 FBXL21Q9UKT6 434 aa24.69■■□□□ 1.54
C9orf3-213ENST00000471978 TRIP11Q15643 1979 aa24.69■■□□□ 1.54
C9orf3-213ENST00000471978 USP34Q70CQ2 3546 aa24.68■■□□□ 1.54
C9orf3-213ENST00000471978 I3L4J1 428 aa24.68■■□□□ 1.54
C9orf3-213ENST00000471978 C8AP07357 584 aa24.68■■□□□ 1.54
C9orf3-213ENST00000471978 HNRNPA1P09651 372 aaKnown RBP eCLIP24.68■■□□□ 1.54
C9orf3-213ENST00000471978 OR1D2P34982 312 aa24.68■■□□□ 1.54
C9orf3-213ENST00000471978 RAB33AQ14088 237 aa24.68■■□□□ 1.54
C9orf3-213ENST00000471978 TMEM119Q4V9L6 283 aa24.68■■□□□ 1.54
C9orf3-213ENST00000471978 ZMAT2Q96NC0 199 aaKnown RBP24.68■■□□□ 1.54
C9orf3-213ENST00000471978 MTRRQ9UBK8 725 aa24.68■■□□□ 1.54
C9orf3-213ENST00000471978 VWA8A3KMH1 1905 aa24.68■■□□□ 1.54
C9orf3-213ENST00000471978 CACNA1HO95180 2353 aa24.68■■□□□ 1.54
C9orf3-213ENST00000471978 NPHP3-ACAD11A0A0J9YXS1 232 aa24.67■■□□□ 1.54
C9orf3-213ENST00000471978 GALR2O43603 387 aaPredicted RBP24.67■■□□□ 1.54
C9orf3-213ENST00000471978 NARSO43776 548 aaKnown RBP24.67■■□□□ 1.54
C9orf3-213ENST00000471978 TOM1L1O75674 476 aa24.67■■□□□ 1.54
C9orf3-213ENST00000471978 MAPTP10636 758 aaKnown RBP24.67■■□□□ 1.54
C9orf3-213ENST00000471978 LAMP2P13473 410 aa24.67■■□□□ 1.54
C9orf3-213ENST00000471978 KCNE1P15382 129 aa24.67■■□□□ 1.54
C9orf3-213ENST00000471978 TKTP29401 623 aaKnown RBP24.67■■□□□ 1.54
C9orf3-213ENST00000471978 BRCC3P46736 316 aa24.67■■□□□ 1.54
C9orf3-213ENST00000471978 CLCN5P51795 746 aa24.67■■□□□ 1.54
C9orf3-213ENST00000471978 GRASPQ7Z6J2 395 aaPredicted RBP24.67■■□□□ 1.54
C9orf3-213ENST00000471978 FLCNQ8NFG4 579 aa24.67■■□□□ 1.54
C9orf3-213ENST00000471978 NXPE3Q969Y0 559 aa24.67■■□□□ 1.54
C9orf3-213ENST00000471978 AK8Q96MA6 479 aa24.67■■□□□ 1.54
C9orf3-213ENST00000471978 IRF2BPLQ9H1B7 796 aa24.67■■□□□ 1.54
C9orf3-213ENST00000471978 CNTN3Q9P232 1028 aa24.67■■□□□ 1.54
C9orf3-213ENST00000471978 ANKFY1Q9P2R3 1169 aa24.67■■□□□ 1.54
C9orf3-213ENST00000471978 CDY1Q9Y6F8 540 aa24.67■■□□□ 1.54
C9orf3-213ENST00000471978 PODXLO00592 558 aa24.66■■□□□ 1.54
C9orf3-213ENST00000471978 CCL16O15467 120 aa24.66■■□□□ 1.54
C9orf3-213ENST00000471978 FSHRP23945 695 aa24.66■■□□□ 1.54
C9orf3-213ENST00000471978 CACNB1Q02641 598 aaPredicted RBP24.66■■□□□ 1.54
C9orf3-213ENST00000471978 AXDND1Q5T1B0 1012 aaPredicted RBP24.66■■□□□ 1.54
C9orf3-213ENST00000471978 RSPO2Q6UXX9 243 aaPredicted RBP24.66■■□□□ 1.54
C9orf3-213ENST00000471978 ANKS3Q6ZW76 656 aa24.66■■□□□ 1.54
C9orf3-213ENST00000471978 SLC44A3Q8N4M1 653 aa24.66■■□□□ 1.54
C9orf3-213ENST00000471978 SLC7A14Q8TBB6 771 aa24.66■■□□□ 1.54
C9orf3-213ENST00000471978 ATOH1Q92858 354 aaPredicted RBP24.66■■□□□ 1.54
C9orf3-213ENST00000471978 FAM86C1Q9NVL1 165 aa24.66■■□□□ 1.54
C9orf3-213ENST00000471978 POLIQ9UNA4 740 aa24.66■■□□□ 1.54
C9orf3-213ENST00000471978 BACE2Q9Y5Z0 518 aa24.66■■□□□ 1.54
C9orf3-213ENST00000471978 H0Y858 1186 aa24.65■■□□□ 1.54
C9orf3-213ENST00000471978 SLC26A4O43511 780 aa24.65■■□□□ 1.54
C9orf3-213ENST00000471978 XYLBO75191 536 aa24.65■■□□□ 1.54
C9orf3-213ENST00000471978 HOXA9P31269 272 aa24.65■■□□□ 1.54
C9orf3-213ENST00000471978 UBA7P41226 1012 aa24.65■■□□□ 1.54
C9orf3-213ENST00000471978 NOLC1Q14978 699 aaKnown RBP eCLIP24.65■■□□□ 1.54
C9orf3-213ENST00000471978 ARSHQ5FYA8 562 aa24.65■■□□□ 1.54
C9orf3-213ENST00000471978 ZPBP2Q6X784 338 aa24.65■■□□□ 1.54
C9orf3-213ENST00000471978 SIX5Q8N196 739 aa24.65■■□□□ 1.54
C9orf3-213ENST00000471978 C18orf25Q96B23 403 aaPredicted RBP24.65■■□□□ 1.54
C9orf3-213ENST00000471978 CALML4Q96GE6 196 aa24.65■■□□□ 1.54
C9orf3-213ENST00000471978 LARSQ9P2J5 1176 aaKnown RBP24.65■■□□□ 1.54
C9orf3-213ENST00000471978 DOCK8Q8NF50 2099 aa24.65■■□□□ 1.54
C9orf3-213ENST00000471978 MEFVO15553 781 aaPredicted RBP24.64■■□□□ 1.54
C9orf3-213ENST00000471978 CFHP08603 1231 aa24.64■■□□□ 1.54
C9orf3-213ENST00000471978 NPR3P17342 541 aa24.64■■□□□ 1.54
C9orf3-213ENST00000471978 NTHL1P78549 312 aa24.64■■□□□ 1.54
C9orf3-213ENST00000471978 UVSSAQ2YD98 709 aa24.64■■□□□ 1.54
C9orf3-213ENST00000471978 SEZ6Q53EL9 994 aa24.64■■□□□ 1.54
C9orf3-213ENST00000471978 CWF19L1Q69YN2 538 aaKnown RBP24.64■■□□□ 1.54
C9orf3-213ENST00000471978 BRAPQ7Z569 592 aa24.64■■□□□ 1.54
C9orf3-213ENST00000471978 ZFP37Q9Y6Q3 630 aaPredicted RBP24.64■■□□□ 1.54
C9orf3-213ENST00000471978 MYH11P35749 1972 aa24.63■■□□□ 1.53
C9orf3-213ENST00000471978 H0YCG3 227 aa24.63■■□□□ 1.53
C9orf3-213ENST00000471978 CLDN3O15551 220 aa24.63■■□□□ 1.53
C9orf3-213ENST00000471978 BMP15O95972 392 aa24.63■■□□□ 1.53
C9orf3-213ENST00000471978 RPL9P32969 192 aaKnown RBP24.63■■□□□ 1.53
C9orf3-213ENST00000471978 MATR3P43243 847 aaKnown RBP eCLIP24.63■■□□□ 1.533e-6■□□□□ 11.2
C9orf3-213ENST00000471978 MCL1Q07820 350 aa24.63■■□□□ 1.53
C9orf3-213ENST00000471978 DHX8Q14562 1220 aaKnown RBP24.63■■□□□ 1.53
C9orf3-213ENST00000471978 WNT16Q9UBV4 365 aa24.63■■□□□ 1.53
C9orf3-213ENST00000471978 ODF2LQ9ULJ1 636 aa24.63■■□□□ 1.53
C9orf3-213ENST00000471978 NUB1Q9Y5A7 615 aa24.63■■□□□ 1.53
C9orf3-213ENST00000471978 MYO15AQ9UKN7 3530 aa24.62■■□□□ 1.53
C9orf3-213ENST00000471978 ZFHX2Q9C0A1 2572 aaPredicted RBP24.62■■□□□ 1.53
C9orf3-213ENST00000471978 ANHXE9PGG2 379 aa24.62■■□□□ 1.53
C9orf3-213ENST00000471978 SRFP11831 508 aa24.62■■□□□ 1.53
C9orf3-213ENST00000471978 NCKAP1LP55160 1127 aa24.62■■□□□ 1.53
C9orf3-213ENST00000471978 HTR4Q13639 388 aa24.62■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms