RNA–Protein interactions for RNA: ENST00000471701.1

PRPF40A-207, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 2

Gene PRPF40A, Length 293 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-207ENST00000471701 Q96MF0 132 aa4.79□□□□□ -1.64
PRPF40A-207ENST00000471701 GALNT9Q9HCQ5 603 aa4.79□□□□□ -1.64
PRPF40A-207ENST00000471701 CASS4Q9NQ75 786 aa4.79□□□□□ -1.64
PRPF40A-207ENST00000471701 LANCL2Q9NS86 450 aa4.79□□□□□ -1.64
PRPF40A-207ENST00000471701 TLK1Q9UKI8 766 aa4.79□□□□□ -1.64
PRPF40A-207ENST00000471701 MTO1Q9Y2Z2 717 aaKnown RBP4.79□□□□□ -1.64
PRPF40A-207ENST00000471701 ATRNL1Q5VV63 1379 aa4.78□□□□□ -1.64
PRPF40A-207ENST00000471701 MAST3O60307 1309 aa4.78□□□□□ -1.64
PRPF40A-207ENST00000471701 MARCH11A6NNE9 402 aa4.78□□□□□ -1.64
PRPF40A-207ENST00000471701 TEX33O43247 280 aa4.78□□□□□ -1.64
PRPF40A-207ENST00000471701 ENDOD1O94919 500 aa4.78□□□□□ -1.64
PRPF40A-207ENST00000471701 CLSTN1O94985 981 aa4.78□□□□□ -1.64
PRPF40A-207ENST00000471701 GPANK1O95872 356 aa4.78□□□□□ -1.64
PRPF40A-207ENST00000471701 ELANEP08246 267 aa4.78□□□□□ -1.64
PRPF40A-207ENST00000471701 CKBP12277 381 aa4.78□□□□□ -1.64
PRPF40A-207ENST00000471701 SLC5A3P53794 718 aa4.78□□□□□ -1.64
PRPF40A-207ENST00000471701 TSPEARQ8WU66 669 aa4.78□□□□□ -1.64
PRPF40A-207ENST00000471701 CHAC2Q8WUX2 184 aa4.78□□□□□ -1.64
PRPF40A-207ENST00000471701 CYFIP2Q96F07 1278 aa4.78□□□□□ -1.64
PRPF40A-207ENST00000471701 DUSP26Q9BV47 211 aa4.78□□□□□ -1.64
PRPF40A-207ENST00000471701 KRTAP9-8Q9BYQ0 159 aa4.78□□□□□ -1.64
PRPF40A-207ENST00000471701 KIAA1586Q9HCI6 787 aa4.78□□□□□ -1.64
PRPF40A-207ENST00000471701 FAM30AQ9NZY2 134 aa4.78□□□□□ -1.64
PRPF40A-207ENST00000471701 DMTF1Q9Y222 760 aa4.78□□□□□ -1.64
PRPF40A-207ENST00000471701 TLDC2A0PJX2 215 aa4.77□□□□□ -1.65
PRPF40A-207ENST00000471701 ERN1O75460 977 aaKnown RBP4.77□□□□□ -1.65
PRPF40A-207ENST00000471701 CXADRP78310 365 aa4.77□□□□□ -1.65
PRPF40A-207ENST00000471701 B3GNTL1Q67FW5 361 aaPredicted RBP4.77□□□□□ -1.65
PRPF40A-207ENST00000471701 OTUD7BQ6GQQ9 843 aa4.77□□□□□ -1.65
PRPF40A-207ENST00000471701 ZNF529Q6P280 563 aa4.77□□□□□ -1.65
PRPF40A-207ENST00000471701 KCNK18Q7Z418 384 aa4.77□□□□□ -1.65
PRPF40A-207ENST00000471701 PTCD3Q96EY7 689 aaKnown RBP4.77□□□□□ -1.65
PRPF40A-207ENST00000471701 AHCYL2Q96HN2 611 aaKnown RBP4.77□□□□□ -1.65
PRPF40A-207ENST00000471701 ZSWIM1Q9BR11 485 aa4.77□□□□□ -1.65
PRPF40A-207ENST00000471701 SPATA5L1Q9BVQ7 753 aa4.77□□□□□ -1.65
PRPF40A-207ENST00000471701 LDAHQ9H6V9 325 aa4.77□□□□□ -1.65
PRPF40A-207ENST00000471701 TMEM74BQ9NUR3 256 aa4.77□□□□□ -1.65
PRPF40A-207ENST00000471701 DNAJC28Q9NX36 388 aa4.77□□□□□ -1.65
PRPF40A-207ENST00000471701 LRIT1Q9P2V4 623 aa4.77□□□□□ -1.65
PRPF40A-207ENST00000471701 TYRP1P17643 537 aa4.76□□□□□ -1.65
PRPF40A-207ENST00000471701 FGFR4P22455 802 aa4.76□□□□□ -1.65
PRPF40A-207ENST00000471701 GCSHP23434 173 aa4.76□□□□□ -1.65
PRPF40A-207ENST00000471701 IL12RB1P42701 662 aa4.76□□□□□ -1.65
PRPF40A-207ENST00000471701 PTH2RP49190 550 aa4.76□□□□□ -1.65
PRPF40A-207ENST00000471701 HSD11B2P80365 405 aa4.76□□□□□ -1.65
PRPF40A-207ENST00000471701 MALLQ13021 153 aa4.76□□□□□ -1.65
PRPF40A-207ENST00000471701 Q6ZNX1 250 aa4.76□□□□□ -1.65
PRPF40A-207ENST00000471701 COLGALT2Q8IYK4 626 aa4.76□□□□□ -1.65
PRPF40A-207ENST00000471701 BOLLQ8N9W6 283 aaKnown RBP4.76□□□□□ -1.65
PRPF40A-207ENST00000471701 NTN5Q8WTR8 489 aaPredicted RBP4.76□□□□□ -1.65
PRPF40A-207ENST00000471701 CASKIN2Q8WXE0 1202 aa4.76□□□□□ -1.65
PRPF40A-207ENST00000471701 ORAI2Q96SN7 254 aa4.76□□□□□ -1.65
PRPF40A-207ENST00000471701 R3HDMLQ9H3Y0 253 aa4.76□□□□□ -1.65
PRPF40A-207ENST00000471701 SCOCQ9UIL1 159 aa4.76□□□□□ -1.65
PRPF40A-207ENST00000471701 AJAP1Q9UKB5 411 aaPredicted RBP4.76□□□□□ -1.65
PRPF40A-207ENST00000471701 PCDHGA2Q9Y5H1 932 aa4.76□□□□□ -1.65
PRPF40A-207ENST00000471701 C1RP00736 705 aa4.75□□□□□ -1.65
PRPF40A-207ENST00000471701 ALAS1P13196 640 aa4.75□□□□□ -1.65
PRPF40A-207ENST00000471701 ZNF37AP17032 561 aaPredicted RBP4.75□□□□□ -1.65
PRPF40A-207ENST00000471701 MCAMP43121 646 aa4.75□□□□□ -1.65
PRPF40A-207ENST00000471701 RARRES1P49788 294 aa4.75□□□□□ -1.65
PRPF40A-207ENST00000471701 TMPRSS15P98073 1019 aa4.75□□□□□ -1.65
PRPF40A-207ENST00000471701 SRSF2Q01130 221 aaKnown RBP4.75□□□□□ -1.65
PRPF40A-207ENST00000471701 CREMQ03060 361 aa4.75□□□□□ -1.65
PRPF40A-207ENST00000471701 OCA2Q04671 838 aa4.75□□□□□ -1.65
PRPF40A-207ENST00000471701 PPP3CAQ08209 521 aa4.75□□□□□ -1.65
PRPF40A-207ENST00000471701 STAT4Q14765 748 aa4.75□□□□□ -1.65
PRPF40A-207ENST00000471701 ZNF169Q14929 603 aaPredicted RBP4.75□□□□□ -1.65
PRPF40A-207ENST00000471701 ATP2B3Q16720 1220 aa4.75□□□□□ -1.65
PRPF40A-207ENST00000471701 ZKSCAN2Q63HK3 967 aa4.75□□□□□ -1.65
PRPF40A-207ENST00000471701 FITM2Q8N6M3 262 aa4.75□□□□□ -1.65
PRPF40A-207ENST00000471701 CCHCR1Q8TD31 782 aa4.75□□□□□ -1.65
PRPF40A-207ENST00000471701 PNKPQ96T60 521 aa4.75□□□□□ -1.65
PRPF40A-207ENST00000471701 GSTO2Q9H4Y5 243 aa4.75□□□□□ -1.65
PRPF40A-207ENST00000471701 MANSC1Q9H8J5 431 aa4.75□□□□□ -1.65
PRPF40A-207ENST00000471701 VTA1Q9NP79 307 aa4.75□□□□□ -1.65
PRPF40A-207ENST00000471701 DMRT3Q9NQL9 472 aa4.75□□□□□ -1.65
PRPF40A-207ENST00000471701 C14orf119Q9NWQ9 140 aa4.75□□□□□ -1.65
PRPF40A-207ENST00000471701 DNM3Q9UQ16 869 aa4.75□□□□□ -1.65
PRPF40A-207ENST00000471701 TBX22Q9Y458 520 aa4.75□□□□□ -1.65
PRPF40A-207ENST00000471701 AATKQ6ZMQ8 1374 aa4.75□□□□□ -1.65
PRPF40A-207ENST00000471701 SALL3Q9BXA9 1300 aa4.74□□□□□ -1.65
PRPF40A-207ENST00000471701 MYADML2A6NDP7 307 aa4.74□□□□□ -1.65
PRPF40A-207ENST00000471701 FAM171A2A8MVW0 826 aa4.74□□□□□ -1.65
PRPF40A-207ENST00000471701 CDK4P11802 303 aa4.74□□□□□ -1.65
PRPF40A-207ENST00000471701 SLC6A2P23975 617 aa4.74□□□□□ -1.65
PRPF40A-207ENST00000471701 HSD3B2P26439 372 aa4.74□□□□□ -1.65
PRPF40A-207ENST00000471701 GUCY1A2P33402 732 aa4.74□□□□□ -1.65
PRPF40A-207ENST00000471701 ALDH1A3P47895 512 aa4.74□□□□□ -1.65
PRPF40A-207ENST00000471701 MASP1P48740 699 aa4.74□□□□□ -1.65
PRPF40A-207ENST00000471701 MRPS35P82673 323 aaKnown RBP4.74□□□□□ -1.65
PRPF40A-207ENST00000471701 SEM1Q6ZVN7 128 aa4.74□□□□□ -1.65
PRPF40A-207ENST00000471701 UBE3BQ7Z3V4 1068 aa4.74□□□□□ -1.65
PRPF40A-207ENST00000471701 DDX55Q8NHQ9 600 aaKnown RBP eCLIP4.74□□□□□ -1.65
PRPF40A-207ENST00000471701 FUBP1Q96AE4 644 aaKnown RBP4.74□□□□□ -1.65
PRPF40A-207ENST00000471701 MARS2Q96GW9 593 aaKnown RBP4.74□□□□□ -1.65
PRPF40A-207ENST00000471701 MYOCQ99972 504 aa4.74□□□□□ -1.65
PRPF40A-207ENST00000471701 AIFM2Q9BRQ8 373 aa4.74□□□□□ -1.65
PRPF40A-207ENST00000471701 KCNE5Q9UJ90 142 aa4.74□□□□□ -1.65
PRPF40A-207ENST00000471701 ACTL7AQ9Y615 435 aa4.74□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms