RNA–Protein interactions for RNA: ENST00000471414.1

COPS3-206, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 455 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-206ENST00000471414 PRDM13Q9H4Q3 707 aa4.32□□□□□ -1.72
COPS3-206ENST00000471414 FBXO34Q9NWN3 711 aa4.32□□□□□ -1.72
COPS3-206ENST00000471414 PCDHGA2Q9Y5H1 932 aa4.32□□□□□ -1.72
COPS3-206ENST00000471414 MAST3O60307 1309 aa4.31□□□□□ -1.72
COPS3-206ENST00000471414 A0A1B0GTW7 788 aa4.31□□□□□ -1.72
COPS3-206ENST00000471414 UNC119BA6NIH7 251 aa4.31□□□□□ -1.72
COPS3-206ENST00000471414 FZD9O00144 591 aa4.31□□□□□ -1.72
COPS3-206ENST00000471414 TEX33O43247 280 aa4.31□□□□□ -1.72
COPS3-206ENST00000471414 CLSTN1O94985 981 aa4.31□□□□□ -1.72
COPS3-206ENST00000471414 PRSS23O95084 383 aa4.31□□□□□ -1.72
COPS3-206ENST00000471414 HLA-DOAP06340 250 aa4.31□□□□□ -1.72
COPS3-206ENST00000471414 BMP5P22003 454 aa4.31□□□□□ -1.72
COPS3-206ENST00000471414 CNGA1P29973 690 aa4.31□□□□□ -1.72
COPS3-206ENST00000471414 CLK3P49761 638 aaKnown RBP4.31□□□□□ -1.72
COPS3-206ENST00000471414 KRT85P78386 507 aa4.31□□□□□ -1.72
COPS3-206ENST00000471414 FOXI1Q12951 378 aa4.31□□□□□ -1.72
COPS3-206ENST00000471414 RESTQ13127 1097 aa4.31□□□□□ -1.72
COPS3-206ENST00000471414 UBXN2BQ14CS0 331 aa4.31□□□□□ -1.72
COPS3-206ENST00000471414 NOMO1Q15155 1222 aa4.31□□□□□ -1.72
COPS3-206ENST00000471414 DACT2Q5SW24 774 aa4.31□□□□□ -1.72
COPS3-206ENST00000471414 MED25Q71SY5 747 aa4.31□□□□□ -1.72
COPS3-206ENST00000471414 DDX42Q86XP3 938 aaKnown RBP eCLIP4.31□□□□□ -1.72
COPS3-206ENST00000471414 MAPKAPK5Q8IW41 473 aa4.31□□□□□ -1.72
COPS3-206ENST00000471414 DNAJC10Q8IXB1 793 aa4.31□□□□□ -1.72
COPS3-206ENST00000471414 NTN5Q8WTR8 489 aaPredicted RBP4.31□□□□□ -1.72
COPS3-206ENST00000471414 SENP6Q9GZR1 1112 aaPredicted RBP4.31□□□□□ -1.72
COPS3-206ENST00000471414 ATP11BQ9Y2G3 1177 aa4.31□□□□□ -1.72
COPS3-206ENST00000471414 MAP3K2Q9Y2U5 619 aa4.31□□□□□ -1.72
COPS3-206ENST00000471414 ACTL7AQ9Y615 435 aa4.31□□□□□ -1.72
COPS3-206ENST00000471414 WASHC2AQ641Q2 1341 aa4.3□□□□□ -1.72
COPS3-206ENST00000471414 CDKL5O76039 1030 aa4.3□□□□□ -1.72
COPS3-206ENST00000471414 POMCP01189 267 aa4.3□□□□□ -1.72
COPS3-206ENST00000471414 SLC6A2P23975 617 aa4.3□□□□□ -1.72
COPS3-206ENST00000471414 MPLP40238 635 aa4.3□□□□□ -1.72
COPS3-206ENST00000471414 AVPR1BP47901 424 aa4.3□□□□□ -1.72
COPS3-206ENST00000471414 RAP2BP61225 183 aa4.3□□□□□ -1.72
COPS3-206ENST00000471414 GPR149Q86SP6 731 aa4.3□□□□□ -1.72
COPS3-206ENST00000471414 CNTD1Q8N815 330 aa4.3□□□□□ -1.72
COPS3-206ENST00000471414 C1orf162Q8NEQ5 155 aaPredicted RBP4.3□□□□□ -1.72
COPS3-206ENST00000471414 STON2Q8WXE9 905 aa4.3□□□□□ -1.72
COPS3-206ENST00000471414 NACC2Q96BF6 587 aa4.3□□□□□ -1.72
COPS3-206ENST00000471414 BOD1Q96IK1 185 aa4.3□□□□□ -1.72
COPS3-206ENST00000471414 UHRF1Q96T88 793 aaPredicted RBP4.3□□□□□ -1.72
COPS3-206ENST00000471414 MYOCQ99972 504 aa4.3□□□□□ -1.72
COPS3-206ENST00000471414 LDAHQ9H6V9 325 aa4.3□□□□□ -1.72
COPS3-206ENST00000471414 CYP4F11Q9HBI6 524 aa4.3□□□□□ -1.72
COPS3-206ENST00000471414 TMEM140Q9NV12 185 aa4.3□□□□□ -1.72
COPS3-206ENST00000471414 SLC5A4Q9NY91 659 aa4.3□□□□□ -1.72
COPS3-206ENST00000471414 KCNE5Q9UJ90 142 aa4.3□□□□□ -1.72
COPS3-206ENST00000471414 MCM8Q9UJA3 840 aa4.3□□□□□ -1.72
COPS3-206ENST00000471414 TUBD1Q9UJT1 453 aa4.3□□□□□ -1.72
COPS3-206ENST00000471414 ATP8A1Q9Y2Q0 1164 aa4.3□□□□□ -1.72
COPS3-206ENST00000471414 IGSF3O75054 1194 aa4.29□□□□□ -1.72
COPS3-206ENST00000471414 GPR32O75388 356 aa4.29□□□□□ -1.72
COPS3-206ENST00000471414 ESRRBO95718 433 aa4.29□□□□□ -1.72
COPS3-206ENST00000471414 HKR1P10072 659 aa4.29□□□□□ -1.72
COPS3-206ENST00000471414 RAP2AP10114 183 aa4.29□□□□□ -1.72
COPS3-206ENST00000471414 FGFR4P22455 802 aa4.29□□□□□ -1.72
COPS3-206ENST00000471414 USP14P54578 494 aa4.29□□□□□ -1.72
COPS3-206ENST00000471414 PER3P56645 1201 aa4.29□□□□□ -1.72
COPS3-206ENST00000471414 CXADRP78310 365 aa4.29□□□□□ -1.72
COPS3-206ENST00000471414 SLFN5Q08AF3 891 aa4.29□□□□□ -1.72
COPS3-206ENST00000471414 PRR16Q569H4 304 aa4.29□□□□□ -1.72
COPS3-206ENST00000471414 TSHZ3Q63HK5 1081 aa4.29□□□□□ -1.72
COPS3-206ENST00000471414 ZNF529Q6P280 563 aa4.29□□□□□ -1.72
COPS3-206ENST00000471414 DCBLD1Q8N8Z6 715 aa4.29□□□□□ -1.72
COPS3-206ENST00000471414 Q8NA96 180 aa4.29□□□□□ -1.72
COPS3-206ENST00000471414 FAM98AQ8NCA5 519 aaKnown RBP4.29□□□□□ -1.72
COPS3-206ENST00000471414 ATL2Q8NHH9 583 aa4.29□□□□□ -1.72
COPS3-206ENST00000471414 BBC3Q96PG8 261 aaPredicted RBP4.29□□□□□ -1.72
COPS3-206ENST00000471414 SLC2A13Q96QE2 648 aa4.29□□□□□ -1.72
COPS3-206ENST00000471414 CRAMP1Q96RY5 1269 aa4.29□□□□□ -1.72
COPS3-206ENST00000471414 RNPEPQ9H4A4 650 aa4.29□□□□□ -1.72
COPS3-206ENST00000471414 SPC25Q9HBM1 224 aa4.29□□□□□ -1.72
COPS3-206ENST00000471414 ZBTB21Q9ULJ3 1066 aa4.29□□□□□ -1.72
COPS3-206ENST00000471414 CADPSQ9ULU8 1353 aa4.28□□□□□ -1.72
COPS3-206ENST00000471414 ZAR1LA6NP61 321 aa4.28□□□□□ -1.72
COPS3-206ENST00000471414 PCDHGA12O60330 932 aa4.28□□□□□ -1.72
COPS3-206ENST00000471414 ZFPL1O95159 310 aa4.28□□□□□ -1.72
COPS3-206ENST00000471414 FOSP01100 380 aaPredicted RBP4.28□□□□□ -1.72
COPS3-206ENST00000471414 CKBP12277 381 aa4.28□□□□□ -1.72
COPS3-206ENST00000471414 DDCP20711 480 aa4.28□□□□□ -1.72
COPS3-206ENST00000471414 C5AR1P21730 350 aa4.28□□□□□ -1.72
COPS3-206ENST00000471414 SLC6A4P31645 630 aa4.28□□□□□ -1.72
COPS3-206ENST00000471414 IARSP41252 1262 aaKnown RBP4.28□□□□□ -1.72
COPS3-206ENST00000471414 CTXN1P60606 82 aa4.28□□□□□ -1.72
COPS3-206ENST00000471414 CYP2A13Q16696 494 aa4.28□□□□□ -1.72
COPS3-206ENST00000471414 CMTR2Q8IYT2 770 aaKnown RBP4.28□□□□□ -1.72
COPS3-206ENST00000471414 FAM43AQ8N2R8 423 aa4.28□□□□□ -1.72
COPS3-206ENST00000471414 LCORLQ8N3X6 602 aa4.28□□□□□ -1.72
COPS3-206ENST00000471414 NRG4Q8WWG1 115 aa4.28□□□□□ -1.72
COPS3-206ENST00000471414 JADE3Q92613 823 aa4.28□□□□□ -1.72
COPS3-206ENST00000471414 DPF2Q92785 391 aa4.28□□□□□ -1.72
COPS3-206ENST00000471414 ZSWIM1Q9BR11 485 aa4.28□□□□□ -1.72
COPS3-206ENST00000471414 MANSC1Q9H8J5 431 aa4.28□□□□□ -1.72
COPS3-206ENST00000471414 HSFX1Q9UBD0 423 aa4.28□□□□□ -1.72
COPS3-206ENST00000471414 IPPQ9Y573 584 aa4.28□□□□□ -1.72
COPS3-206ENST00000471414 PCDHGA9Q9Y5G4 932 aaKnown RBP4.28□□□□□ -1.72
COPS3-206ENST00000471414 PCDHGA8Q9Y5G5 932 aa4.28□□□□□ -1.72
COPS3-206ENST00000471414 PCDHGA7Q9Y5G6 932 aa4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms