RNA–Protein interactions for RNA: ENST00000471344.1

COL1A1-203, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 1,192 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-203ENST00000471344 YARSP54577 528 aaKnown RBP16.81■□□□□ 0.28
COL1A1-203ENST00000471344 NCKAP1LP55160 1127 aa16.81■□□□□ 0.28
COL1A1-203ENST00000471344 STRN3Q13033 797 aa16.81■□□□□ 0.28
COL1A1-203ENST00000471344 NOLC1Q14978 699 aaKnown RBP eCLIP16.81■□□□□ 0.28
COL1A1-203ENST00000471344 PTPAQ15257 358 aa16.81■□□□□ 0.28
COL1A1-203ENST00000471344 OTOP3Q7RTS5 596 aa16.81■□□□□ 0.28
COL1A1-203ENST00000471344 APBB1IPQ7Z5R6 666 aaPredicted RBP16.81■□□□□ 0.28
COL1A1-203ENST00000471344 GPR65Q8IYL9 337 aa16.81■□□□□ 0.28
COL1A1-203ENST00000471344 RSAD2Q8WXG1 361 aa16.81■□□□□ 0.28
COL1A1-203ENST00000471344 DDX27Q96GQ7 796 aaKnown RBP16.81■□□□□ 0.28
COL1A1-203ENST00000471344 EPSTI1Q96J88 318 aa16.81■□□□□ 0.28
COL1A1-203ENST00000471344 PLEKHA4Q9H4M7 779 aa16.81■□□□□ 0.28
COL1A1-203ENST00000471344 CNTN3Q9P232 1028 aa16.81■□□□□ 0.28
COL1A1-203ENST00000471344 PODXLO00592 558 aa16.8■□□□□ 0.28
COL1A1-203ENST00000471344 TOM1L1O75674 476 aa16.8■□□□□ 0.28
COL1A1-203ENST00000471344 ZMYND10O75800 440 aa16.8■□□□□ 0.28
COL1A1-203ENST00000471344 PAPLNO95428 1278 aa16.8■□□□□ 0.28
COL1A1-203ENST00000471344 SYT1P21579 422 aa16.8■□□□□ 0.28
COL1A1-203ENST00000471344 MARCKSP29966 332 aaPredicted RBP16.8■□□□□ 0.28
COL1A1-203ENST00000471344 GBP2P32456 591 aaPredicted RBP16.8■□□□□ 0.28
COL1A1-203ENST00000471344 LONP1P36776 959 aaKnown RBP16.8■□□□□ 0.28
COL1A1-203ENST00000471344 NTHL1P78549 312 aa16.8■□□□□ 0.28
COL1A1-203ENST00000471344 NHLH1Q02575 133 aa16.8■□□□□ 0.28
COL1A1-203ENST00000471344 CREMQ03060 361 aa16.8■□□□□ 0.28
COL1A1-203ENST00000471344 SPAG1Q07617 926 aa16.8■□□□□ 0.28
COL1A1-203ENST00000471344 SLC10A6Q3KNW5 377 aa16.8■□□□□ 0.28
COL1A1-203ENST00000471344 ZBTB41Q5SVQ8 909 aa16.8■□□□□ 0.28
COL1A1-203ENST00000471344 DCLRE1AQ6PJP8 1040 aa16.8■□□□□ 0.28
COL1A1-203ENST00000471344 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.8■□□□□ 0.28
COL1A1-203ENST00000471344 GET4Q7L5D6 327 aaPredicted RBP16.8■□□□□ 0.28
COL1A1-203ENST00000471344 SUGP1Q8IWZ8 645 aaKnown RBP16.8■□□□□ 0.28
COL1A1-203ENST00000471344 UBALD2Q8IYN6 164 aa16.8■□□□□ 0.28
COL1A1-203ENST00000471344 PLCD3Q8N3E9 789 aa16.8■□□□□ 0.28
COL1A1-203ENST00000471344 HDAC7Q8WUI4 952 aa16.8■□□□□ 0.28
COL1A1-203ENST00000471344 RAD54LQ92698 747 aa16.8■□□□□ 0.28
COL1A1-203ENST00000471344 ACSF2Q96CM8 615 aaPredicted RBP16.8■□□□□ 0.28
COL1A1-203ENST00000471344 CALML4Q96GE6 196 aa16.8■□□□□ 0.28
COL1A1-203ENST00000471344 ACAP3Q96P50 834 aa16.8■□□□□ 0.28
COL1A1-203ENST00000471344 PRKD2Q9BZL6 878 aa16.8■□□□□ 0.28
COL1A1-203ENST00000471344 TOPORSQ9NS56 1045 aaPredicted RBP16.8■□□□□ 0.28
COL1A1-203ENST00000471344 ZDHHC7Q9NXF8 308 aa16.8■□□□□ 0.28
COL1A1-203ENST00000471344 KCND2Q9NZV8 630 aa16.8■□□□□ 0.28
COL1A1-203ENST00000471344 TUBGCP4Q9UGJ1 667 aa16.8■□□□□ 0.28
COL1A1-203ENST00000471344 USP34Q70CQ2 3546 aa16.79■□□□□ 0.28
COL1A1-203ENST00000471344 MYO15AQ9UKN7 3530 aa16.79■□□□□ 0.28
COL1A1-203ENST00000471344 NARSO43776 548 aaKnown RBP16.79■□□□□ 0.28
COL1A1-203ENST00000471344 CXCL8P10145 99 aa16.79■□□□□ 0.28
COL1A1-203ENST00000471344 KCNE1P15382 129 aa16.79■□□□□ 0.28
COL1A1-203ENST00000471344 HOXD11P31277 338 aaPredicted RBP16.79■□□□□ 0.28
COL1A1-203ENST00000471344 OR1D2P34982 312 aa16.79■□□□□ 0.28
COL1A1-203ENST00000471344 TNFSF9P41273 254 aa16.79■□□□□ 0.28
COL1A1-203ENST00000471344 SMTNP53814 917 aa16.79■□□□□ 0.28
COL1A1-203ENST00000471344 CEBPZQ03701 1054 aaKnown RBP16.79■□□□□ 0.28
COL1A1-203ENST00000471344 MCL1Q07820 350 aa16.79■□□□□ 0.28
COL1A1-203ENST00000471344 ELAVL2Q12926 359 aaKnown RBP16.79■□□□□ 0.28
COL1A1-203ENST00000471344 HAUS6Q7Z4H7 955 aa16.79■□□□□ 0.28
COL1A1-203ENST00000471344 KCTD17Q8N5Z5 321 aa16.79■□□□□ 0.28
COL1A1-203ENST00000471344 RASSF8Q8NHQ8 419 aa16.79■□□□□ 0.28
COL1A1-203ENST00000471344 UROC1Q96N76 676 aa16.79■□□□□ 0.28
COL1A1-203ENST00000471344 CLIC6Q96NY7 704 aa16.79■□□□□ 0.28
COL1A1-203ENST00000471344 PHOX2BQ99453 314 aa16.79■□□□□ 0.28
COL1A1-203ENST00000471344 RHOBTB2Q9BYZ6 727 aa16.79■□□□□ 0.28
COL1A1-203ENST00000471344 KCNK12Q9HB15 430 aa16.79■□□□□ 0.28
COL1A1-203ENST00000471344 PIDD1Q9HB75 910 aa16.79■□□□□ 0.28
COL1A1-203ENST00000471344 MTRRQ9UBK8 725 aa16.79■□□□□ 0.28
COL1A1-203ENST00000471344 DPP7Q9UHL4 492 aa16.79■□□□□ 0.28
COL1A1-203ENST00000471344 FBXO2Q9UK22 296 aaPredicted RBP16.79■□□□□ 0.28
COL1A1-203ENST00000471344 CDY1Q9Y6F8 540 aa16.79■□□□□ 0.28
COL1A1-203ENST00000471344 K7ENM7 598 aa16.78■□□□□ 0.28
COL1A1-203ENST00000471344 CCL16O15467 120 aa16.78■□□□□ 0.28
COL1A1-203ENST00000471344 BMP15O95972 392 aa16.78■□□□□ 0.28
COL1A1-203ENST00000471344 C8AP07357 584 aa16.78■□□□□ 0.28
COL1A1-203ENST00000471344 MATR3P43243 847 aaKnown RBP eCLIP16.78■□□□□ 0.28
COL1A1-203ENST00000471344 ZNF131P52739 623 aa16.78■□□□□ 0.28
COL1A1-203ENST00000471344 SLC39A4Q6P5W5 647 aa16.78■□□□□ 0.28
COL1A1-203ENST00000471344 ELMSAN1Q6PJG2 1045 aa16.78■□□□□ 0.28
COL1A1-203ENST00000471344 ZPBP2Q6X784 338 aa16.78■□□□□ 0.28
COL1A1-203ENST00000471344 GRASPQ7Z6J2 395 aaPredicted RBP16.78■□□□□ 0.28
COL1A1-203ENST00000471344 MYCT1Q8N699 235 aa16.78■□□□□ 0.28
COL1A1-203ENST00000471344 SLC7A14Q8TBB6 771 aa16.78■□□□□ 0.28
COL1A1-203ENST00000471344 BICD1Q96G01 975 aa16.78■□□□□ 0.28
COL1A1-203ENST00000471344 FIZ1Q96SL8 496 aa16.78■□□□□ 0.28
COL1A1-203ENST00000471344 IKZF4Q9H2S9 585 aa16.78■□□□□ 0.28
COL1A1-203ENST00000471344 ZHX3Q9H4I2 956 aa16.78■□□□□ 0.28
COL1A1-203ENST00000471344 LARSQ9P2J5 1176 aaKnown RBP16.78■□□□□ 0.28
COL1A1-203ENST00000471344 DAXXQ9UER7 740 aaPredicted RBP16.78■□□□□ 0.28
COL1A1-203ENST00000471344 ODF2LQ9ULJ1 636 aa16.78■□□□□ 0.28
COL1A1-203ENST00000471344 MTMR6Q9Y217 621 aa16.78■□□□□ 0.28
COL1A1-203ENST00000471344 TISP43B9A030 160 aa16.77■□□□□ 0.28
COL1A1-203ENST00000471344 CLDN3O15551 220 aa16.77■□□□□ 0.28
COL1A1-203ENST00000471344 SLC26A4O43511 780 aa16.77■□□□□ 0.28
COL1A1-203ENST00000471344 FAM189A1O60320 539 aa16.77■□□□□ 0.28
COL1A1-203ENST00000471344 FAM13AO94988 1023 aa16.77■□□□□ 0.28
COL1A1-203ENST00000471344 C1RP00736 705 aa16.77■□□□□ 0.28
COL1A1-203ENST00000471344 NMT1P30419 496 aaKnown RBP16.77■□□□□ 0.28
COL1A1-203ENST00000471344 GUCY2FP51841 1108 aa16.77■□□□□ 0.28
COL1A1-203ENST00000471344 TCF15Q12870 199 aa16.77■□□□□ 0.28
COL1A1-203ENST00000471344 RAB33AQ14088 237 aa16.77■□□□□ 0.28
COL1A1-203ENST00000471344 CYP26C1Q6V0L0 522 aa16.77■□□□□ 0.28
COL1A1-203ENST00000471344 LARP4BQ92615 738 aaKnown RBP16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms