RNA–Protein interactions for RNA: ENST00000470953.1

VARS-222, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 392 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-222ENST00000470953 GLUD2P49448 558 aa6.59□□□□□ -1.35
VARS-222ENST00000470953 DSG1Q02413 1049 aa6.59□□□□□ -1.35
VARS-222ENST00000470953 MTMR1Q13613 665 aa6.59□□□□□ -1.35
VARS-222ENST00000470953 SLC5A9Q2M3M2 681 aa6.59□□□□□ -1.35
VARS-222ENST00000470953 PMS2CLQ68D20 193 aa6.59□□□□□ -1.35
VARS-222ENST00000470953 PDXDC1Q6P996 788 aa6.59□□□□□ -1.35
VARS-222ENST00000470953 ATG14Q6ZNE5 492 aa6.59□□□□□ -1.35
VARS-222ENST00000470953 TRMT1LQ7Z2T5 733 aaKnown RBP6.59□□□□□ -1.35
VARS-222ENST00000470953 RAB11FIP4Q86YS3 637 aa6.59□□□□□ -1.35
VARS-222ENST00000470953 CMTR1Q8N1G2 835 aaKnown RBP6.59□□□□□ -1.35
VARS-222ENST00000470953 TMTC2Q8N394 836 aa6.59□□□□□ -1.35
VARS-222ENST00000470953 PDCD7Q8N8D1 485 aaKnown RBP6.59□□□□□ -1.35
VARS-222ENST00000470953 OR2I1PQ8NGU4 316 aa6.59□□□□□ -1.35
VARS-222ENST00000470953 PIGKQ92643 395 aa6.59□□□□□ -1.35
VARS-222ENST00000470953 MCRS1Q96EZ8 462 aa6.59□□□□□ -1.35
VARS-222ENST00000470953 LZTS2Q9BRK4 669 aa6.59□□□□□ -1.35
VARS-222ENST00000470953 LRRC2Q9BYS8 371 aa6.59□□□□□ -1.35
VARS-222ENST00000470953 BRD9Q9H8M2 597 aa6.59□□□□□ -1.35
VARS-222ENST00000470953 DNMT3BQ9UBC3 853 aaKnown RBP6.59□□□□□ -1.35
VARS-222ENST00000470953 SLC9A2Q9UBY0 812 aa6.59□□□□□ -1.35
VARS-222ENST00000470953 PLEKHB1Q9UF11 243 aaPredicted RBP6.59□□□□□ -1.35
VARS-222ENST00000470953 POLIQ9UNA4 740 aa6.59□□□□□ -1.35
VARS-222ENST00000470953 APOBEC2Q9Y235 224 aaKnown RBP6.59□□□□□ -1.35
VARS-222ENST00000470953 INVSQ9Y283 1065 aa6.59□□□□□ -1.35
VARS-222ENST00000470953 FAN1Q9Y2M0 1017 aa6.59□□□□□ -1.35
VARS-222ENST00000470953 PRG3Q9Y2Y8 225 aaPredicted RBP6.59□□□□□ -1.35
VARS-222ENST00000470953 UBIAD1Q9Y5Z9 338 aa6.59□□□□□ -1.35
VARS-222ENST00000470953 TAF6LQ9Y6J9 622 aa6.59□□□□□ -1.35
VARS-222ENST00000470953 PDZD2O15018 2839 aa6.59□□□□□ -1.35
VARS-222ENST00000470953 PDCD11Q14690 1871 aaKnown RBP6.59□□□□□ -1.35
VARS-222ENST00000470953 AKAP9Q99996 3911 aa6.59□□□□□ -1.35
VARS-222ENST00000470953 THADAQ6YHU6 1953 aa6.58□□□□□ -1.36
VARS-222ENST00000470953 MTORP42345 2549 aa6.58□□□□□ -1.36
VARS-222ENST00000470953 NCANO14594 1321 aa6.58□□□□□ -1.36
VARS-222ENST00000470953 IGKV6D-21A0A0A0MT36 114 aa6.58□□□□□ -1.36
VARS-222ENST00000470953 GOLGA8AA7E2F4 631 aa6.58□□□□□ -1.36
VARS-222ENST00000470953 GOLGA8BA8MQT2 603 aa6.58□□□□□ -1.36
VARS-222ENST00000470953 SH2B2O14492 632 aaPredicted RBP6.58□□□□□ -1.36
VARS-222ENST00000470953 ATG7O95352 703 aa6.58□□□□□ -1.36
VARS-222ENST00000470953 CCNE2O96020 404 aa6.58□□□□□ -1.36
VARS-222ENST00000470953 POMCP01189 267 aa6.58□□□□□ -1.36
VARS-222ENST00000470953 ALDH2P05091 517 aa6.58□□□□□ -1.36
VARS-222ENST00000470953 HMGB1P09429 215 aaKnown RBP6.58□□□□□ -1.36
VARS-222ENST00000470953 DARSP14868 501 aaKnown RBP6.58□□□□□ -1.36
VARS-222ENST00000470953 RXRAP19793 462 aa6.58□□□□□ -1.36
VARS-222ENST00000470953 SOX9P48436 509 aa6.58□□□□□ -1.36
VARS-222ENST00000470953 ANTXR2P58335 489 aa6.58□□□□□ -1.36
VARS-222ENST00000470953 SEMG2Q02383 582 aa6.58□□□□□ -1.36
VARS-222ENST00000470953 ITGB3BPQ13352 177 aaPredicted RBP6.58□□□□□ -1.36
VARS-222ENST00000470953 ARHGAP40Q5TG30 622 aa6.58□□□□□ -1.36
VARS-222ENST00000470953 TXNDC11Q6PKC3 985 aa6.58□□□□□ -1.36
VARS-222ENST00000470953 BLOC1S2Q6QNY1 142 aa6.58□□□□□ -1.36
VARS-222ENST00000470953 GLB1LQ6UWU2 654 aa6.58□□□□□ -1.36
VARS-222ENST00000470953 AGMOQ6ZNB7 445 aa6.58□□□□□ -1.36
VARS-222ENST00000470953 MAP4K3Q8IVH8 894 aa6.58□□□□□ -1.36
VARS-222ENST00000470953 CCDC60Q8IWA6 550 aaPredicted RBP6.58□□□□□ -1.36
VARS-222ENST00000470953 LRRC71Q8N4P6 559 aa6.58□□□□□ -1.36
VARS-222ENST00000470953 LINC01465Q8N7H1 131 aa6.58□□□□□ -1.36
VARS-222ENST00000470953 SMARCC2Q8TAQ2 1214 aa6.58□□□□□ -1.36
VARS-222ENST00000470953 JAKMIP1Q96N16 626 aaKnown RBP6.58□□□□□ -1.36
VARS-222ENST00000470953 MTA3Q9BTC8 594 aa6.58□□□□□ -1.36
VARS-222ENST00000470953 GTPBP2Q9BX10 602 aaKnown RBP6.58□□□□□ -1.36
VARS-222ENST00000470953 NUSAP1Q9BXS6 441 aaKnown RBP6.58□□□□□ -1.36
VARS-222ENST00000470953 GPR62Q9BZJ7 368 aa6.58□□□□□ -1.36
VARS-222ENST00000470953 LY9Q9HBG7 655 aa6.58□□□□□ -1.36
VARS-222ENST00000470953 LRRC4CQ9HCJ2 640 aa6.58□□□□□ -1.36
VARS-222ENST00000470953 ZNF334Q9HCZ1 680 aaPredicted RBP6.58□□□□□ -1.36
VARS-222ENST00000470953 CHST7Q9NS84 486 aa6.58□□□□□ -1.36
VARS-222ENST00000470953 SEPT9Q9UHD8 586 aaPredicted RBP6.58□□□□□ -1.36
VARS-222ENST00000470953 DPP7Q9UHL4 492 aa6.58□□□□□ -1.36
VARS-222ENST00000470953 AKT3Q9Y243 479 aa6.58□□□□□ -1.36
VARS-222ENST00000470953 PCDHB9Q9Y5E1 797 aa6.58□□□□□ -1.36
VARS-222ENST00000470953 CELSR2Q9HCU4 2923 aa6.58□□□□□ -1.36
VARS-222ENST00000470953 PNMA6FA0A0J9YX94 578 aa6.57□□□□□ -1.36
VARS-222ENST00000470953 PALM3A6NDB9 673 aaPredicted RBP6.57□□□□□ -1.36
VARS-222ENST00000470953 PLK4O00444 970 aa6.57□□□□□ -1.36
VARS-222ENST00000470953 ADAM12O43184 909 aa6.57□□□□□ -1.36
VARS-222ENST00000470953 ZBTB43O43298 467 aa6.57□□□□□ -1.36
VARS-222ENST00000470953 OPHN1O60890 802 aa6.57□□□□□ -1.36
VARS-222ENST00000470953 CEBPBP17676 345 aa6.57□□□□□ -1.36
VARS-222ENST00000470953 PSMA5P28066 241 aa6.57□□□□□ -1.36
VARS-222ENST00000470953 GPC3P51654 580 aa6.57□□□□□ -1.36
VARS-222ENST00000470953 CCDC173Q0VFZ6 552 aa6.57□□□□□ -1.36
VARS-222ENST00000470953 NECTIN1Q15223 517 aa6.57□□□□□ -1.36
VARS-222ENST00000470953 MAPK6Q16659 721 aa6.57□□□□□ -1.36
VARS-222ENST00000470953 RTN1Q16799 776 aa6.57□□□□□ -1.36
VARS-222ENST00000470953 ZNF484Q5JVG2 852 aa6.57□□□□□ -1.36
VARS-222ENST00000470953 ELMSAN1Q6PJG2 1045 aa6.57□□□□□ -1.36
VARS-222ENST00000470953 PRSS55Q6UWB4 352 aaPredicted RBP6.57□□□□□ -1.36
VARS-222ENST00000470953 ABHD15Q6UXT9 468 aa6.57□□□□□ -1.36
VARS-222ENST00000470953 HEATR3Q7Z4Q2 680 aa6.57□□□□□ -1.36
VARS-222ENST00000470953 ZC3H18Q86VM9 953 aaKnown RBP6.57□□□□□ -1.36
VARS-222ENST00000470953 SPACA3Q8IXA5 215 aa6.57□□□□□ -1.36
VARS-222ENST00000470953 SRRM1Q8IYB3 904 aaKnown RBP6.57□□□□□ -1.36
VARS-222ENST00000470953 COLGALT2Q8IYK4 626 aa6.57□□□□□ -1.36
VARS-222ENST00000470953 RABGGTAQ92696 567 aa6.57□□□□□ -1.36
VARS-222ENST00000470953 TNPO1Q92973 898 aaKnown RBP6.57□□□□□ -1.36
VARS-222ENST00000470953 CDHR1Q96JP9 859 aa6.57□□□□□ -1.36
VARS-222ENST00000470953 TCEANC2Q96MN5 208 aa6.57□□□□□ -1.36
VARS-222ENST00000470953 MBOAT7Q96N66 472 aa6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms