RNA–Protein interactions for RNA: ENST00000470356.3

HMG20B-209, Transcript of high mobility group 20B, humanhuman

TSL 1 (best)

Gene HMG20B, Length 806 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-209ENST00000470356 MYADMQ96S97 322 aa34.33■■■■□ 3.09
HMG20B-209ENST00000470356 SLC38A7Q9NVC3 462 aa34.33■■■■□ 3.09
HMG20B-209ENST00000470356 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP34.33■■■■□ 3.09
HMG20B-209ENST00000470356 SLC26A4O43511 780 aa34.32■■■■□ 3.08
HMG20B-209ENST00000470356 TRAPPC3O43617 180 aa34.32■■■■□ 3.08
HMG20B-209ENST00000470356 PLA2G4BP0C869 781 aa34.32■■■■□ 3.08
HMG20B-209ENST00000470356 TMEM119Q4V9L6 283 aa34.32■■■■□ 3.08
HMG20B-209ENST00000470356 DDX27Q96GQ7 796 aaKnown RBP34.32■■■■□ 3.08
HMG20B-209ENST00000470356 ACAP3Q96P50 834 aa34.32■■■■□ 3.08
HMG20B-209ENST00000470356 DUSP12Q9UNI6 340 aa34.32■■■■□ 3.08
HMG20B-209ENST00000470356 ADAM12O43184 909 aa34.31■■■■□ 3.08
HMG20B-209ENST00000470356 HNRNPA1P09651 372 aaKnown RBP eCLIP34.31■■■■□ 3.08
HMG20B-209ENST00000470356 SOX4Q06945 474 aaPredicted RBP34.31■■■■□ 3.08
HMG20B-209ENST00000470356 STRN3Q13033 797 aa34.31■■■■□ 3.08
HMG20B-209ENST00000470356 RAB33AQ14088 237 aa34.31■■■■□ 3.08
HMG20B-209ENST00000470356 TMEM161BQ8NDZ6 487 aa34.31■■■■□ 3.08
HMG20B-209ENST00000470356 GOLGA2P5Q9HBQ8 144 aa34.31■■■■□ 3.08
HMG20B-209ENST00000470356 KCNE1P15382 129 aa34.3■■■■□ 3.08
HMG20B-209ENST00000470356 LIN9Q5TKA1 542 aa34.3■■■■□ 3.08
HMG20B-209ENST00000470356 NXPE3Q969Y0 559 aa34.3■■■■□ 3.08
HMG20B-209ENST00000470356 SNX27Q96L92 541 aa34.3■■■■□ 3.08
HMG20B-209ENST00000470356 MFSD1Q9H3U5 465 aa34.3■■■■□ 3.08
HMG20B-209ENST00000470356 MTRRQ9UBK8 725 aa34.3■■■■□ 3.08
HMG20B-209ENST00000470356 TOM1L1O75674 476 aa34.29■■■■□ 3.08
HMG20B-209ENST00000470356 MAPTP10636 758 aaKnown RBP34.29■■■■□ 3.08
HMG20B-209ENST00000470356 OR1D2P34982 312 aa34.29■■■■□ 3.08
HMG20B-209ENST00000470356 ASTLQ6HA08 431 aaPredicted RBP34.29■■■■□ 3.08
HMG20B-209ENST00000470356 C3orf58Q8NDZ4 430 aa34.29■■■■□ 3.08
HMG20B-209ENST00000470356 ZBTB45Q96K62 511 aaPredicted RBP34.29■■■■□ 3.08
HMG20B-209ENST00000470356 ZMAT2Q96NC0 199 aaKnown RBP34.29■■■■□ 3.08
HMG20B-209ENST00000470356 IRF2BPLQ9H1B7 796 aa34.29■■■■□ 3.08
HMG20B-209ENST00000470356 HOXA9P31269 272 aa34.28■■■■□ 3.08
HMG20B-209ENST00000470356 CLCN5P51795 746 aa34.28■■■■□ 3.08
HMG20B-209ENST00000470356 ARSHQ5FYA8 562 aa34.28■■■■□ 3.08
HMG20B-209ENST00000470356 PPM1LQ5SGD2 360 aa34.28■■■■□ 3.08
HMG20B-209ENST00000470356 ZPBP2Q6X784 338 aa34.28■■■■□ 3.08
HMG20B-209ENST00000470356 TMEM105Q8N8V8 129 aa34.28■■■■□ 3.08
HMG20B-209ENST00000470356 RSAD2Q8WXG1 361 aa34.28■■■■□ 3.08
HMG20B-209ENST00000470356 CNTN3Q9P232 1028 aa34.28■■■■□ 3.08
HMG20B-209ENST00000470356 BACE2Q9Y5Z0 518 aa34.28■■■■□ 3.08
HMG20B-209ENST00000470356 BMP15O95972 392 aa34.27■■■■□ 3.08
HMG20B-209ENST00000470356 C8AP07357 584 aa34.27■■■■□ 3.08
HMG20B-209ENST00000470356 LAMP2P13473 410 aa34.27■■■■□ 3.08
HMG20B-209ENST00000470356 ANKS3Q6ZW76 656 aa34.27■■■■□ 3.08
HMG20B-209ENST00000470356 BRAPQ7Z569 592 aa34.27■■■■□ 3.08
HMG20B-209ENST00000470356 LARSQ9P2J5 1176 aaKnown RBP34.27■■■■□ 3.08
HMG20B-209ENST00000470356 TKTP29401 623 aaKnown RBP34.26■■■■□ 3.08
HMG20B-209ENST00000470356 UBA7P41226 1012 aa34.26■■■■□ 3.08
HMG20B-209ENST00000470356 UVSSAQ2YD98 709 aa34.26■■■■□ 3.08
HMG20B-209ENST00000470356 GET4Q7L5D6 327 aaPredicted RBP34.26■■■■□ 3.08
HMG20B-209ENST00000470356 PHOX2BQ99453 314 aa34.26■■■■□ 3.08
HMG20B-209ENST00000470356 ZFP37Q9Y6Q3 630 aaPredicted RBP34.26■■■■□ 3.08
HMG20B-209ENST00000470356 PDCD11Q14690 1871 aaKnown RBP34.25■■■■□ 3.07
HMG20B-209ENST00000470356 NPHP3-ACAD11A0A0J9YXS1 232 aa34.25■■■■□ 3.07
HMG20B-209ENST00000470356 H0YCG3 227 aa34.25■■■■□ 3.07
HMG20B-209ENST00000470356 I3L4J1 428 aa34.25■■■■□ 3.07
HMG20B-209ENST00000470356 PODXLO00592 558 aa34.25■■■■□ 3.07
HMG20B-209ENST00000470356 MEFVO15553 781 aaPredicted RBP34.25■■■■□ 3.07
HMG20B-209ENST00000470356 GALR2O43603 387 aaPredicted RBP34.25■■■■□ 3.07
HMG20B-209ENST00000470356 HARSP12081 509 aaKnown RBP34.25■■■■□ 3.07
HMG20B-209ENST00000470356 RPL9P32969 192 aaKnown RBP34.25■■■■□ 3.07
HMG20B-209ENST00000470356 BRCC3P46736 316 aa34.25■■■■□ 3.07
HMG20B-209ENST00000470356 NOLC1Q14978 699 aaKnown RBP eCLIP34.25■■■■□ 3.07
HMG20B-209ENST00000470356 AXDND1Q5T1B0 1012 aaPredicted RBP34.25■■■■□ 3.07
HMG20B-209ENST00000470356 RSPO2Q6UXX9 243 aaPredicted RBP34.25■■■■□ 3.07
HMG20B-209ENST00000470356 RTL10Q7L3V2 364 aa34.25■■■■□ 3.07
HMG20B-209ENST00000470356 GRASPQ7Z6J2 395 aaPredicted RBP34.25■■■■□ 3.07
HMG20B-209ENST00000470356 SLC44A3Q8N4M1 653 aa34.25■■■■□ 3.07
HMG20B-209ENST00000470356 CALML4Q96GE6 196 aa34.25■■■■□ 3.07
HMG20B-209ENST00000470356 ANKFY1Q9P2R3 1169 aa34.25■■■■□ 3.07
HMG20B-209ENST00000470356 FBXL21Q9UKT6 434 aa34.25■■■■□ 3.07
HMG20B-209ENST00000470356 CDY1Q9Y6F8 540 aa34.25■■■■□ 3.07
HMG20B-209ENST00000470356 NARSO43776 548 aaKnown RBP34.24■■■■□ 3.07
HMG20B-209ENST00000470356 FSHRP23945 695 aa34.24■■■■□ 3.07
HMG20B-209ENST00000470356 KCNN1Q92952 543 aa34.24■■■■□ 3.07
HMG20B-209ENST00000470356 ODF2LQ9ULJ1 636 aa34.24■■■■□ 3.07
HMG20B-209ENST00000470356 ZFHX2Q9C0A1 2572 aaPredicted RBP34.23■■■■□ 3.07
HMG20B-209ENST00000470356 ANHXE9PGG2 379 aa34.23■■■■□ 3.07
HMG20B-209ENST00000470356 CLDN3O15551 220 aa34.23■■■■□ 3.07
HMG20B-209ENST00000470356 XYLBO75191 536 aa34.23■■■■□ 3.07
HMG20B-209ENST00000470356 POU2F2P09086 479 aa34.23■■■■□ 3.07
HMG20B-209ENST00000470356 CACNB1Q02641 598 aaPredicted RBP34.23■■■■□ 3.07
HMG20B-209ENST00000470356 MCL1Q07820 350 aa34.23■■■■□ 3.07
HMG20B-209ENST00000470356 SLC10A6Q3KNW5 377 aa34.23■■■■□ 3.07
HMG20B-209ENST00000470356 SLC7A14Q8TBB6 771 aa34.23■■■■□ 3.07
HMG20B-209ENST00000470356 WNT16Q9UBV4 365 aa34.23■■■■□ 3.07
HMG20B-209ENST00000470356 NPR3P17342 541 aa34.22■■■■□ 3.07
HMG20B-209ENST00000470356 LONP1P36776 959 aaKnown RBP34.22■■■■□ 3.07
HMG20B-209ENST00000470356 NCKAP1LP55160 1127 aa34.22■■■■□ 3.07
HMG20B-209ENST00000470356 CUL4AQ13619 759 aa34.22■■■■□ 3.07
HMG20B-209ENST00000470356 HAUS6Q7Z4H7 955 aa34.22■■■■□ 3.07
HMG20B-209ENST00000470356 FLCNQ8NFG4 579 aa34.22■■■■□ 3.07
HMG20B-209ENST00000470356 C18orf25Q96B23 403 aaPredicted RBP34.22■■■■□ 3.07
HMG20B-209ENST00000470356 REEP2Q9BRK0 252 aa34.22■■■■□ 3.07
HMG20B-209ENST00000470356 NOTCH4Q99466 2003 aa34.21■■■■□ 3.07
HMG20B-209ENST00000470356 CCL16O15467 120 aa34.21■■■■□ 3.07
HMG20B-209ENST00000470356 SCP2P22307 547 aa34.21■■■■□ 3.07
HMG20B-209ENST00000470356 HTR4Q13639 388 aa34.21■■■■□ 3.07
HMG20B-209ENST00000470356 SEZ6Q53EL9 994 aa34.21■■■■□ 3.07
HMG20B-209ENST00000470356 CWF19L1Q69YN2 538 aaKnown RBP34.21■■■■□ 3.07
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms