RNA–Protein interactions for RNA: ENST00000470247.1

SREBF1-209, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 5

Gene SREBF1, Length 374 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-209ENST00000470247 BAIAP3O94812 1187 aa12.19□□□□□ -0.46
SREBF1-209ENST00000470247 FGBP02675 491 aa12.19□□□□□ -0.46
SREBF1-209ENST00000470247 AFPP02771 609 aaKnown RBP12.19□□□□□ -0.46
SREBF1-209ENST00000470247 FGFR1P11362 822 aa12.19□□□□□ -0.46
SREBF1-209ENST00000470247 GTF2H1P32780 548 aa12.19□□□□□ -0.46
SREBF1-209ENST00000470247 PBX1P40424 430 aa12.19□□□□□ -0.46
SREBF1-209ENST00000470247 MLH1P40692 756 aa12.19□□□□□ -0.46
SREBF1-209ENST00000470247 GCLMP48507 274 aa12.19□□□□□ -0.46
SREBF1-209ENST00000470247 FMO5P49326 533 aa12.19□□□□□ -0.46
SREBF1-209ENST00000470247 GATMP50440 423 aa12.19□□□□□ -0.46
SREBF1-209ENST00000470247 YARSP54577 528 aaKnown RBP12.19□□□□□ -0.46
SREBF1-209ENST00000470247 UBASH3AP57075 661 aa12.19□□□□□ -0.46
SREBF1-209ENST00000470247 PPP2R3AQ06190 1150 aa12.19□□□□□ -0.46
SREBF1-209ENST00000470247 SOX4Q06945 474 aaPredicted RBP12.19□□□□□ -0.46
SREBF1-209ENST00000470247 KCNMA1Q12791 1236 aa12.19□□□□□ -0.46
SREBF1-209ENST00000470247 ZACNQ401N2 412 aa12.19□□□□□ -0.46
SREBF1-209ENST00000470247 DCAF17Q5H9S7 520 aaPredicted RBP12.19□□□□□ -0.46
SREBF1-209ENST00000470247 GLRA4Q5JXX5 417 aa12.19□□□□□ -0.46
SREBF1-209ENST00000470247 RASIP1Q5U651 963 aa12.19□□□□□ -0.46
SREBF1-209ENST00000470247 TCERG1LQ5VWI1 586 aa12.19□□□□□ -0.46
SREBF1-209ENST00000470247 OTOP2Q7RTS6 562 aa12.19□□□□□ -0.46
SREBF1-209ENST00000470247 NPAS4Q8IUM7 802 aa12.19□□□□□ -0.46
SREBF1-209ENST00000470247 WDR49Q8IV35 697 aa12.19□□□□□ -0.46
SREBF1-209ENST00000470247 HACE1Q8IYU2 909 aa12.19□□□□□ -0.46
SREBF1-209ENST00000470247 RNF169Q8NCN4 708 aa12.19□□□□□ -0.46
SREBF1-209ENST00000470247 LMO3Q8TAP4 145 aa12.19□□□□□ -0.46
SREBF1-209ENST00000470247 HERVK_113Q902F9 699 aa12.19□□□□□ -0.46
SREBF1-209ENST00000470247 TOP1MTQ969P6 601 aa12.19□□□□□ -0.46
SREBF1-209ENST00000470247 CASD1Q96PB1 797 aa12.19□□□□□ -0.46
SREBF1-209ENST00000470247 PPP1R10Q96QC0 940 aaKnown RBP12.19□□□□□ -0.46
SREBF1-209ENST00000470247 FNBP1Q96RU3 617 aa12.19□□□□□ -0.46
SREBF1-209ENST00000470247 TSPAN18Q96SJ8 248 aa12.19□□□□□ -0.46
SREBF1-209ENST00000470247 XPO4Q9C0E2 1151 aaKnown RBP12.19□□□□□ -0.46
SREBF1-209ENST00000470247 CXXC1Q9P0U4 656 aaPredicted RBP12.19□□□□□ -0.46
SREBF1-209ENST00000470247 SIX4Q9UIU6 781 aa12.19□□□□□ -0.46
SREBF1-209ENST00000470247 DERAQ9Y315 318 aa12.19□□□□□ -0.46
SREBF1-209ENST00000470247 COQ4Q9Y3A0 265 aa12.19□□□□□ -0.46
SREBF1-209ENST00000470247 PCDHB7Q9Y5E2 793 aa12.19□□□□□ -0.46
SREBF1-209ENST00000470247 NR2E3Q9Y5X4 410 aa12.19□□□□□ -0.46
SREBF1-209ENST00000470247 CITO14578 2027 aa12.18□□□□□ -0.46
SREBF1-209ENST00000470247 B4GALT3O60512 393 aa12.18□□□□□ -0.46
SREBF1-209ENST00000470247 EFCAB14O75071 495 aa12.18□□□□□ -0.46
SREBF1-209ENST00000470247 VNN1O95497 513 aa12.18□□□□□ -0.46
SREBF1-209ENST00000470247 SERPINC1P01008 464 aa12.18□□□□□ -0.46
SREBF1-209ENST00000470247 CST3P01034 146 aaPredicted RBP12.18□□□□□ -0.46
SREBF1-209ENST00000470247 TNNI1P19237 187 aa12.18□□□□□ -0.46
SREBF1-209ENST00000470247 IBSPP21815 317 aaPredicted RBP12.18□□□□□ -0.46
SREBF1-209ENST00000470247 KCNA4P22459 653 aa12.18□□□□□ -0.46
SREBF1-209ENST00000470247 MAGEA10P43363 369 aaPredicted RBP12.18□□□□□ -0.46
SREBF1-209ENST00000470247 GUCY2FP51841 1108 aa12.18□□□□□ -0.46
SREBF1-209ENST00000470247 PTPN21Q16825 1174 aa12.18□□□□□ -0.46
SREBF1-209ENST00000470247 DUOXA2Q1HG44 320 aa12.18□□□□□ -0.46
SREBF1-209ENST00000470247 TDRD10Q5VZ19 366 aaKnown RBP12.18□□□□□ -0.46
SREBF1-209ENST00000470247 TMCO2Q7Z6W1 182 aaPredicted RBP12.18□□□□□ -0.46
SREBF1-209ENST00000470247 NT5DC4Q86YG4 428 aa12.18□□□□□ -0.46
SREBF1-209ENST00000470247 ANKRD20A12PQ8NF67 263 aa12.18□□□□□ -0.46
SREBF1-209ENST00000470247 HELQQ8TDG4 1101 aa12.18□□□□□ -0.46
SREBF1-209ENST00000470247 SEMA4DQ92854 862 aa12.18□□□□□ -0.46
SREBF1-209ENST00000470247 C18orf25Q96B23 403 aaPredicted RBP12.18□□□□□ -0.46
SREBF1-209ENST00000470247 MTMR12Q9C0I1 747 aa12.18□□□□□ -0.46
SREBF1-209ENST00000470247 TMEM8AQ9HCN3 771 aa12.18□□□□□ -0.46
SREBF1-209ENST00000470247 UBN1Q9NPG3 1134 aa12.18□□□□□ -0.46
SREBF1-209ENST00000470247 P4HA2O15460 535 aa12.17□□□□□ -0.46
SREBF1-209ENST00000470247 DGKIO75912 1065 aa12.17□□□□□ -0.46
SREBF1-209ENST00000470247 ACTN1P12814 892 aa12.17□□□□□ -0.46
SREBF1-209ENST00000470247 CYP3A5P20815 502 aa12.17□□□□□ -0.46
SREBF1-209ENST00000470247 IGFBP6P24592 240 aaPredicted RBP12.17□□□□□ -0.46
SREBF1-209ENST00000470247 MRE11P49959 708 aa12.17□□□□□ -0.46
SREBF1-209ENST00000470247 SCNN1GP51170 649 aa12.17□□□□□ -0.46
SREBF1-209ENST00000470247 AP3M2P53677 418 aa12.17□□□□□ -0.46
SREBF1-209ENST00000470247 TFAMQ00059 246 aaKnown RBP12.17□□□□□ -0.46
SREBF1-209ENST00000470247 TMEM132DQ14C87 1099 aa12.17□□□□□ -0.46
SREBF1-209ENST00000470247 EPC2Q52LR7 807 aa12.17□□□□□ -0.46
SREBF1-209ENST00000470247 NOMO2Q5JPE7 1267 aa12.17□□□□□ -0.46
SREBF1-209ENST00000470247 KRT39Q6A163 491 aa12.17□□□□□ -0.46
SREBF1-209ENST00000470247 PSRC1Q6PGN9 363 aaPredicted RBP12.17□□□□□ -0.46
SREBF1-209ENST00000470247 TRAPPC11Q7Z392 1133 aa12.17□□□□□ -0.46
SREBF1-209ENST00000470247 USP37Q86T82 979 aa12.17□□□□□ -0.46
SREBF1-209ENST00000470247 C1orf127Q8N9H9 656 aa12.17□□□□□ -0.46
SREBF1-209ENST00000470247 TAS1R2Q8TE23 839 aa12.17□□□□□ -0.46
SREBF1-209ENST00000470247 ZNF689Q96CS4 500 aaPredicted RBP12.17□□□□□ -0.46
SREBF1-209ENST00000470247 KIF12Q96FN5 646 aa12.17□□□□□ -0.46
SREBF1-209ENST00000470247 ERGIC2Q96RQ1 377 aa12.17□□□□□ -0.46
SREBF1-209ENST00000470247 LBHD1Q9BQE6 289 aaPredicted RBP12.17□□□□□ -0.46
SREBF1-209ENST00000470247 MMRN2Q9H8L6 949 aa12.17□□□□□ -0.46
SREBF1-209ENST00000470247 RC3H2Q9HBD1 1191 aaKnown RBP12.17□□□□□ -0.46
SREBF1-209ENST00000470247 TUBGCP4Q9UGJ1 667 aa12.17□□□□□ -0.46
SREBF1-209ENST00000470247 SIK3Q9Y2K2 1263 aa12.17□□□□□ -0.46
SREBF1-209ENST00000470247 COL4A6Q14031 1691 aa12.16□□□□□ -0.46
SREBF1-209ENST00000470247 CEP290O15078 2479 aa12.16□□□□□ -0.46
SREBF1-209ENST00000470247 ANO9A1A5B4 782 aa12.16□□□□□ -0.46
SREBF1-209ENST00000470247 GTPBP10A4D1E9 387 aaKnown RBP12.16□□□□□ -0.46
SREBF1-209ENST00000470247 DDHD2O94830 711 aa12.16□□□□□ -0.46
SREBF1-209ENST00000470247 UPP2O95045 317 aa12.16□□□□□ -0.46
SREBF1-209ENST00000470247 POMCP01189 267 aa12.16□□□□□ -0.46
SREBF1-209ENST00000470247 HLA-DRAP01903 254 aa12.16□□□□□ -0.46
SREBF1-209ENST00000470247 AMHP03971 560 aa12.16□□□□□ -0.46
SREBF1-209ENST00000470247 THP07101 528 aa12.16□□□□□ -0.46
SREBF1-209ENST00000470247 PON1P27169 355 aa12.16□□□□□ -0.46
SREBF1-209ENST00000470247 KLK7P49862 253 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms