RNA–Protein interactions for RNA: ENST00000469769.1

THBS3-206, Transcript of thrombospondin 3, humanhuman

TSL 2

Gene THBS3, Length 777 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-206ENST00000469769 PLCB1Q9NQ66 1216 aa11.25□□□□□ -0.61
THBS3-206ENST00000469769 HES2Q9Y543 173 aa11.25□□□□□ -0.61
THBS3-206ENST00000469769 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.25□□□□□ -0.61
THBS3-206ENST00000469769 ABHD14A-ACY1A0A1B0GW23 586 aa11.24□□□□□ -0.61
THBS3-206ENST00000469769 MEIS3P2A8K0S8 358 aa11.24□□□□□ -0.61
THBS3-206ENST00000469769 RBAK-RBAKDNI3L0D1 243 aa11.24□□□□□ -0.61
THBS3-206ENST00000469769 CYP3A5P20815 502 aa11.24□□□□□ -0.61
THBS3-206ENST00000469769 PON1P27169 355 aa11.24□□□□□ -0.61
THBS3-206ENST00000469769 GCLMP48507 274 aa11.24□□□□□ -0.61
THBS3-206ENST00000469769 MXI1P50539 228 aa11.24□□□□□ -0.61
THBS3-206ENST00000469769 YARSP54577 528 aaKnown RBP11.24□□□□□ -0.61
THBS3-206ENST00000469769 OSTNP61366 133 aa11.24□□□□□ -0.61
THBS3-206ENST00000469769 TBX2Q13207 712 aaPredicted RBP11.24□□□□□ -0.61
THBS3-206ENST00000469769 NAB2Q15742 525 aa11.24□□□□□ -0.61
THBS3-206ENST00000469769 DCAF17Q5H9S7 520 aaPredicted RBP11.24□□□□□ -0.61
THBS3-206ENST00000469769 FKBP15Q5T1M5 1219 aa11.24□□□□□ -0.61
THBS3-206ENST00000469769 TCERG1LQ5VWI1 586 aa11.24□□□□□ -0.61
THBS3-206ENST00000469769 TDRD10Q5VZ19 366 aaKnown RBP11.24□□□□□ -0.61
THBS3-206ENST00000469769 CREBRFQ8IUR6 639 aa11.24□□□□□ -0.61
THBS3-206ENST00000469769 RPUSD2Q8IZ73 545 aaKnown RBP11.24□□□□□ -0.61
THBS3-206ENST00000469769 TMEM199Q8N511 208 aa11.24□□□□□ -0.61
THBS3-206ENST00000469769 OR5B17Q8NGF7 314 aa11.24□□□□□ -0.61
THBS3-206ENST00000469769 PGBD4Q96DM1 585 aa11.24□□□□□ -0.61
THBS3-206ENST00000469769 IQCDQ96DY2 449 aa11.24□□□□□ -0.61
THBS3-206ENST00000469769 PPP1R9BQ96SB3 815 aa11.24□□□□□ -0.61
THBS3-206ENST00000469769 TTYH3Q9C0H2 523 aa11.24□□□□□ -0.61
THBS3-206ENST00000469769 CXCL16Q9H2A7 254 aa11.24□□□□□ -0.61
THBS3-206ENST00000469769 VRTNQ9H8Y1 702 aa11.24□□□□□ -0.61
THBS3-206ENST00000469769 RNF19AQ9NV58 838 aa11.24□□□□□ -0.61
THBS3-206ENST00000469769 TMEM161AQ9NX61 479 aa11.24□□□□□ -0.61
THBS3-206ENST00000469769 FBXL5Q9UKA1 691 aa11.24□□□□□ -0.61
THBS3-206ENST00000469769 SMIM28A0A1B0GU29 152 aa11.23□□□□□ -0.61
THBS3-206ENST00000469769 PTGESO14684 152 aa11.23□□□□□ -0.61
THBS3-206ENST00000469769 EFCAB14O75071 495 aa11.23□□□□□ -0.61
THBS3-206ENST00000469769 ZC3H11AO75152 810 aaKnown RBP eCLIP11.23□□□□□ -0.61
THBS3-206ENST00000469769 OFD1O75665 1012 aa11.23□□□□□ -0.61
THBS3-206ENST00000469769 NOL4O94818 638 aa11.23□□□□□ -0.61
THBS3-206ENST00000469769 VNN1O95497 513 aa11.23□□□□□ -0.61
THBS3-206ENST00000469769 STAU1O95793 577 aaKnown RBP11.23□□□□□ -0.61
THBS3-206ENST00000469769 NFICP08651 508 aa11.23□□□□□ -0.61
THBS3-206ENST00000469769 DLATP10515 647 aaKnown RBP11.23□□□□□ -0.61
THBS3-206ENST00000469769 ITGA4P13612 1032 aa11.23□□□□□ -0.61
THBS3-206ENST00000469769 CSF2RAP15509 400 aa11.23□□□□□ -0.61
THBS3-206ENST00000469769 TNNI1P19237 187 aa11.23□□□□□ -0.61
THBS3-206ENST00000469769 AKAP5P24588 427 aa11.23□□□□□ -0.61
THBS3-206ENST00000469769 PLCB2Q00722 1185 aa11.23□□□□□ -0.61
THBS3-206ENST00000469769 ARID5BQ14865 1188 aa11.23□□□□□ -0.61
THBS3-206ENST00000469769 SYCP1Q15431 976 aa11.23□□□□□ -0.61
THBS3-206ENST00000469769 EXOC3L4Q17RC7 722 aa11.23□□□□□ -0.61
THBS3-206ENST00000469769 SPECC1LQ69YQ0 1117 aa11.23□□□□□ -0.61
THBS3-206ENST00000469769 JADE1Q6IE81 842 aa11.23□□□□□ -0.61
THBS3-206ENST00000469769 GBP6Q6ZN66 633 aa11.23□□□□□ -0.61
THBS3-206ENST00000469769 TRAPPC11Q7Z392 1133 aa11.23□□□□□ -0.61
THBS3-206ENST00000469769 EHBP1Q8NDI1 1231 aa11.23□□□□□ -0.61
THBS3-206ENST00000469769 CACTINQ8WUQ7 758 aaKnown RBP11.23□□□□□ -0.61
THBS3-206ENST00000469769 FAXDC2Q96IV6 333 aa11.23□□□□□ -0.61
THBS3-206ENST00000469769 PPP1R10Q96QC0 940 aaKnown RBP11.23□□□□□ -0.61
THBS3-206ENST00000469769 NUP58Q9BVL2 599 aa11.23□□□□□ -0.61
THBS3-206ENST00000469769 EDEM3Q9BZQ6 932 aa11.23□□□□□ -0.61
THBS3-206ENST00000469769 SIX2Q9NPC8 291 aa11.23□□□□□ -0.61
THBS3-206ENST00000469769 IL23AQ9NPF7 189 aa11.23□□□□□ -0.61
THBS3-206ENST00000469769 RNF216Q9NWF9 866 aaPredicted RBP11.23□□□□□ -0.61
THBS3-206ENST00000469769 IMPACTQ9P2X3 320 aa11.23□□□□□ -0.61
THBS3-206ENST00000469769 SIX4Q9UIU6 781 aa11.23□□□□□ -0.61
THBS3-206ENST00000469769 DAAM1Q9Y4D1 1078 aa11.23□□□□□ -0.61
THBS3-206ENST00000469769 A0A1W2PQJ5 194 aa11.22□□□□□ -0.61
THBS3-206ENST00000469769 ANO9A1A5B4 782 aa11.22□□□□□ -0.61
THBS3-206ENST00000469769 ARL5CA6NH57 179 aa11.22□□□□□ -0.61
THBS3-206ENST00000469769 TDRD15B5MCY1 1934 aaKnown RBP11.22□□□□□ -0.61
THBS3-206ENST00000469769 BAIAP3O94812 1187 aa11.22□□□□□ -0.61
THBS3-206ENST00000469769 CST3P01034 146 aaPredicted RBP11.22□□□□□ -0.61
THBS3-206ENST00000469769 LRPAP1P30533 357 aa11.22□□□□□ -0.61
THBS3-206ENST00000469769 SCN1AP35498 2009 aa11.22□□□□□ -0.61
THBS3-206ENST00000469769 MYL7Q01449 175 aa11.22□□□□□ -0.61
THBS3-206ENST00000469769 CETN1Q12798 172 aa11.22□□□□□ -0.61
THBS3-206ENST00000469769 IKBKEQ14164 716 aa11.22□□□□□ -0.61
THBS3-206ENST00000469769 TMEM132DQ14C87 1099 aa11.22□□□□□ -0.61
THBS3-206ENST00000469769 FNDC1Q4ZHG4 1894 aaPredicted RBP11.22□□□□□ -0.61
THBS3-206ENST00000469769 TRIM65Q6PJ69 517 aa11.22□□□□□ -0.61
THBS3-206ENST00000469769 C16orf59Q7L2K0 433 aa11.22□□□□□ -0.61
THBS3-206ENST00000469769 C1orf127Q8N9H9 656 aa11.22□□□□□ -0.61
THBS3-206ENST00000469769 FBXL13Q8NEE6 735 aa11.22□□□□□ -0.61
THBS3-206ENST00000469769 TAS1R2Q8TE23 839 aa11.22□□□□□ -0.61
THBS3-206ENST00000469769 SEMA4DQ92854 862 aa11.22□□□□□ -0.61
THBS3-206ENST00000469769 ANKRD36BP1Q96IX9 119 aa11.22□□□□□ -0.61
THBS3-206ENST00000469769 GAD1Q99259 594 aa11.22□□□□□ -0.61
THBS3-206ENST00000469769 NAA15Q9BXJ9 866 aaKnown RBP11.22□□□□□ -0.61
THBS3-206ENST00000469769 MTMR12Q9C0I1 747 aa11.22□□□□□ -0.61
THBS3-206ENST00000469769 XYLT2Q9H1B5 865 aa11.22□□□□□ -0.61
THBS3-206ENST00000469769 GANQ9H2C0 597 aa11.22□□□□□ -0.61
THBS3-206ENST00000469769 RSAD1Q9HA92 442 aa11.22□□□□□ -0.61
THBS3-206ENST00000469769 PRDM5Q9NQX1 630 aaPredicted RBP11.22□□□□□ -0.61
THBS3-206ENST00000469769 RAB20Q9NX57 234 aa11.22□□□□□ -0.61
THBS3-206ENST00000469769 MIOSQ9NXC5 875 aa11.22□□□□□ -0.61
THBS3-206ENST00000469769 UBQLN1Q9UMX0 589 aaKnown RBP11.22□□□□□ -0.61
THBS3-206ENST00000469769 XPOTO43592 962 aaKnown RBP11.21□□□□□ -0.61
THBS3-206ENST00000469769 ASS1P00966 412 aaKnown RBP11.21□□□□□ -0.61
THBS3-206ENST00000469769 HLA-DRAP01903 254 aa11.21□□□□□ -0.61
THBS3-206ENST00000469769 SLC9A1P19634 815 aa11.21□□□□□ -0.61
THBS3-206ENST00000469769 RFX1P22670 979 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms