RNA–Protein interactions for RNA: ENST00000468807.1

TTC28-204, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 2

Gene TTC28, Length 594 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-204ENST00000468807 N4BP1O75113 896 aaKnown RBP23.84■■□□□ 1.41
TTC28-204ENST00000468807 ZMYND10O75800 440 aa23.84■■□□□ 1.41
TTC28-204ENST00000468807 PROZP22891 400 aa23.84■■□□□ 1.41
TTC28-204ENST00000468807 AVPR2P30518 371 aa23.84■■□□□ 1.41
TTC28-204ENST00000468807 SOX4Q06945 474 aaPredicted RBP23.84■■□□□ 1.41
TTC28-204ENST00000468807 TDGQ13569 410 aa23.84■■□□□ 1.41
TTC28-204ENST00000468807 NOLC1Q14978 699 aaKnown RBP eCLIP23.84■■□□□ 1.41
TTC28-204ENST00000468807 PPM1LQ5SGD2 360 aa23.84■■□□□ 1.41
TTC28-204ENST00000468807 TMEM161BQ8NDZ6 487 aa23.84■■□□□ 1.41
TTC28-204ENST00000468807 BICD1Q96G01 975 aa23.84■■□□□ 1.41
TTC28-204ENST00000468807 SNX27Q96L92 541 aa23.84■■□□□ 1.41
TTC28-204ENST00000468807 PRRX2Q99811 253 aa23.84■■□□□ 1.41
TTC28-204ENST00000468807 NTPCRQ9BSD7 190 aaKnown RBP23.84■■□□□ 1.41
TTC28-204ENST00000468807 RHOBTB2Q9BYZ6 727 aa23.84■■□□□ 1.41
TTC28-204ENST00000468807 FBXW11Q9UKB1 542 aa23.84■■□□□ 1.41
TTC28-204ENST00000468807 TOM1L1O75674 476 aa23.83■■□□□ 1.41
TTC28-204ENST00000468807 BMP15O95972 392 aa23.83■■□□□ 1.41
TTC28-204ENST00000468807 C8AP07357 584 aa23.83■■□□□ 1.41
TTC28-204ENST00000468807 MAPTP10636 758 aaKnown RBP23.83■■□□□ 1.41
TTC28-204ENST00000468807 OR1D2P34982 312 aa23.83■■□□□ 1.41
TTC28-204ENST00000468807 BRCC3P46736 316 aa23.83■■□□□ 1.41
TTC28-204ENST00000468807 PTPN5P54829 565 aa23.83■■□□□ 1.41
TTC28-204ENST00000468807 SF3A1Q15459 793 aaKnown RBP23.83■■□□□ 1.41
TTC28-204ENST00000468807 SEZ6Q53EL9 994 aa23.83■■□□□ 1.41
TTC28-204ENST00000468807 ALKAL1Q6UXT8 129 aa23.83■■□□□ 1.41
TTC28-204ENST00000468807 GPBP1Q86WP2 473 aa23.83■■□□□ 1.41
TTC28-204ENST00000468807 C3orf58Q8NDZ4 430 aa23.83■■□□□ 1.41
TTC28-204ENST00000468807 ZMAT2Q96NC0 199 aaKnown RBP23.83■■□□□ 1.41
TTC28-204ENST00000468807 MYADMQ96S97 322 aa23.83■■□□□ 1.41
TTC28-204ENST00000468807 LARSQ9P2J5 1176 aaKnown RBP23.83■■□□□ 1.41
TTC28-204ENST00000468807 POLIQ9UNA4 740 aa23.83■■□□□ 1.41
TTC28-204ENST00000468807 PODXLO00592 558 aa23.82■■□□□ 1.4
TTC28-204ENST00000468807 ABLIM1O14639 778 aa23.82■■□□□ 1.4
TTC28-204ENST00000468807 KRT18P05783 430 aaKnown RBP23.82■■□□□ 1.4
TTC28-204ENST00000468807 FGFR3P22607 806 aa23.82■■□□□ 1.4
TTC28-204ENST00000468807 TKTP29401 623 aaKnown RBP23.82■■□□□ 1.4
TTC28-204ENST00000468807 ARSHQ5FYA8 562 aa23.82■■□□□ 1.4
TTC28-204ENST00000468807 DDX27Q96GQ7 796 aaKnown RBP23.82■■□□□ 1.4
TTC28-204ENST00000468807 ZHX3Q9H4I2 956 aa23.82■■□□□ 1.4
TTC28-204ENST00000468807 IGSF9Q9P2J2 1179 aa23.82■■□□□ 1.4
TTC28-204ENST00000468807 FBXL21Q9UKT6 434 aa23.82■■□□□ 1.4
TTC28-204ENST00000468807 CDY1Q9Y6F8 540 aa23.82■■□□□ 1.4
TTC28-204ENST00000468807 H0YCG3 227 aa23.81■■□□□ 1.4
TTC28-204ENST00000468807 CLDN3O15551 220 aa23.81■■□□□ 1.4
TTC28-204ENST00000468807 GRIN1Q05586 938 aa23.81■■□□□ 1.4
TTC28-204ENST00000468807 KARSQ15046 597 aaKnown RBP23.81■■□□□ 1.4
TTC28-204ENST00000468807 XKR4Q5GH76 650 aa23.81■■□□□ 1.4
TTC28-204ENST00000468807 GRASPQ7Z6J2 395 aaPredicted RBP23.81■■□□□ 1.4
TTC28-204ENST00000468807 SLC7A14Q8TBB6 771 aa23.81■■□□□ 1.4
TTC28-204ENST00000468807 RSAD2Q8WXG1 361 aa23.81■■□□□ 1.4
TTC28-204ENST00000468807 C18orf25Q96B23 403 aaPredicted RBP23.81■■□□□ 1.4
TTC28-204ENST00000468807 REEP2Q9BRK0 252 aa23.81■■□□□ 1.4
TTC28-204ENST00000468807 MTRRQ9UBK8 725 aa23.81■■□□□ 1.4
TTC28-204ENST00000468807 NUB1Q9Y5A7 615 aa23.81■■□□□ 1.4
TTC28-204ENST00000468807 DOCK6Q96HP0 2047 aa23.81■■□□□ 1.4
TTC28-204ENST00000468807 DOCK8Q8NF50 2099 aa23.8■■□□□ 1.4
TTC28-204ENST00000468807 CCL16O15467 120 aa23.8■■□□□ 1.4
TTC28-204ENST00000468807 SLC26A4O43511 780 aa23.8■■□□□ 1.4
TTC28-204ENST00000468807 FAM13AO94988 1023 aa23.8■■□□□ 1.4
TTC28-204ENST00000468807 KCNE1P15382 129 aa23.8■■□□□ 1.4
TTC28-204ENST00000468807 PLCG1P19174 1290 aa23.8■■□□□ 1.4
TTC28-204ENST00000468807 PDCP20941 246 aa23.8■■□□□ 1.4
TTC28-204ENST00000468807 LONP1P36776 959 aaKnown RBP23.8■■□□□ 1.4
TTC28-204ENST00000468807 CUL4AQ13619 759 aa23.8■■□□□ 1.4
TTC28-204ENST00000468807 MCM6Q14566 821 aa23.8■■□□□ 1.4
TTC28-204ENST00000468807 AXDND1Q5T1B0 1012 aaPredicted RBP23.8■■□□□ 1.4
TTC28-204ENST00000468807 CD300LGQ6UXG3 332 aa23.8■■□□□ 1.4
TTC28-204ENST00000468807 ZPBP2Q6X784 338 aa23.8■■□□□ 1.4
TTC28-204ENST00000468807 ANKS3Q6ZW76 656 aa23.8■■□□□ 1.4
TTC28-204ENST00000468807 MYCT1Q8N699 235 aa23.8■■□□□ 1.4
TTC28-204ENST00000468807 FLCNQ8NFG4 579 aa23.8■■□□□ 1.4
TTC28-204ENST00000468807 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP23.8■■□□□ 1.4
TTC28-204ENST00000468807 CNTN3Q9P232 1028 aa23.8■■□□□ 1.4
TTC28-204ENST00000468807 EPS15L1Q9UBC2 864 aa23.8■■□□□ 1.4
TTC28-204ENST00000468807 ODF2LQ9ULJ1 636 aa23.8■■□□□ 1.4
TTC28-204ENST00000468807 DUSP12Q9UNI6 340 aa23.8■■□□□ 1.4
TTC28-204ENST00000468807 K7ENM7 598 aa23.79■■□□□ 1.4
TTC28-204ENST00000468807 NARSO43776 548 aaKnown RBP23.79■■□□□ 1.4
TTC28-204ENST00000468807 FSHRP23945 695 aa23.79■■□□□ 1.4
TTC28-204ENST00000468807 MRE11P49959 708 aa23.79■■□□□ 1.4
TTC28-204ENST00000468807 NCKAP1LP55160 1127 aa23.79■■□□□ 1.4
TTC28-204ENST00000468807 NTHL1P78549 312 aa23.79■■□□□ 1.4
TTC28-204ENST00000468807 TCF15Q12870 199 aa23.79■■□□□ 1.4
TTC28-204ENST00000468807 RAB33AQ14088 237 aa23.79■■□□□ 1.4
TTC28-204ENST00000468807 RSPO2Q6UXX9 243 aaPredicted RBP23.79■■□□□ 1.4
TTC28-204ENST00000468807 HAUS6Q7Z4H7 955 aa23.79■■□□□ 1.4
TTC28-204ENST00000468807 ST13P5Q8NFI4 369 aaPredicted RBP23.79■■□□□ 1.4
TTC28-204ENST00000468807 XYLBO75191 536 aa23.78■■□□□ 1.4
TTC28-204ENST00000468807 TBCAO75347 108 aaKnown RBP23.78■■□□□ 1.4
TTC28-204ENST00000468807 HNRNPA1P09651 372 aaKnown RBP eCLIP23.78■■□□□ 1.4
TTC28-204ENST00000468807 CXCL8P10145 99 aa23.78■■□□□ 1.4
TTC28-204ENST00000468807 LIG4P49917 911 aa23.78■■□□□ 1.4
TTC28-204ENST00000468807 ARPP19P56211 112 aa23.78■■□□□ 1.4
TTC28-204ENST00000468807 MCL1Q07820 350 aa23.78■■□□□ 1.4
TTC28-204ENST00000468807 SLC10A6Q3KNW5 377 aa23.78■■□□□ 1.4
TTC28-204ENST00000468807 LRRC15Q8TF66 581 aa23.78■■□□□ 1.4
TTC28-204ENST00000468807 RAD54LQ92698 747 aa23.78■■□□□ 1.4
TTC28-204ENST00000468807 BLOC1S4Q9NUP1 217 aa23.78■■□□□ 1.4
TTC28-204ENST00000468807 CLIC4Q9Y696 253 aa23.78■■□□□ 1.4
TTC28-204ENST00000468807 PDCD11Q14690 1871 aaKnown RBP23.78■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms