RNA–Protein interactions for RNA: ENST00000467847.1

TRIM56-203, Transcript of tripartite motif containing 56, humanhuman

TSL 2

Gene TRIM56, Length 581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-203ENST00000467847 PEX3P56589 373 aa18.96■□□□□ 0.63
TRIM56-203ENST00000467847 PDIA5Q14554 519 aa18.96■□□□□ 0.63
TRIM56-203ENST00000467847 UPP1Q16831 310 aa18.96■□□□□ 0.63
TRIM56-203ENST00000467847 UVSSAQ2YD98 709 aa18.96■□□□□ 0.63
TRIM56-203ENST00000467847 MTSS1LQ765P7 747 aa18.96■□□□□ 0.63
TRIM56-203ENST00000467847 DGLUCYQ7Z3D6 616 aa18.96■□□□□ 0.63
TRIM56-203ENST00000467847 ITFG1Q8TB96 612 aa18.96■□□□□ 0.63
TRIM56-203ENST00000467847 ZSCAN31Q96LW9 406 aaPredicted RBP18.96■□□□□ 0.63
TRIM56-203ENST00000467847 CCDC94Q9BW85 323 aaPredicted RBP18.96■□□□□ 0.63
TRIM56-203ENST00000467847 TOPORSQ9NS56 1045 aaPredicted RBP18.96■□□□□ 0.63
TRIM56-203ENST00000467847 CDY1Q9Y6F8 540 aa18.96■□□□□ 0.63
TRIM56-203ENST00000467847 EP300Q09472 2414 aaPredicted RBP18.96■□□□□ 0.63
TRIM56-203ENST00000467847 CITO14578 2027 aa18.96■□□□□ 0.63
TRIM56-203ENST00000467847 NOTCH4Q99466 2003 aa18.96■□□□□ 0.63
TRIM56-203ENST00000467847 PHLPP2Q6ZVD8 1323 aa18.96■□□□□ 0.63
TRIM56-203ENST00000467847 MIA3Q5JRA6 1907 aa18.96■□□□□ 0.63
TRIM56-203ENST00000467847 DCHS1Q96JQ0 3298 aa18.96■□□□□ 0.63
TRIM56-203ENST00000467847 SMIM28A0A1B0GU29 152 aa18.95■□□□□ 0.62
TRIM56-203ENST00000467847 I3L4J1 428 aa18.95■□□□□ 0.62
TRIM56-203ENST00000467847 POU2F2P09086 479 aa18.95■□□□□ 0.62
TRIM56-203ENST00000467847 TKTP29401 623 aaKnown RBP18.95■□□□□ 0.62
TRIM56-203ENST00000467847 NPTX2P47972 431 aa18.95■□□□□ 0.62
TRIM56-203ENST00000467847 OSTNP61366 133 aa18.95■□□□□ 0.62
TRIM56-203ENST00000467847 GPC5P78333 572 aa18.95■□□□□ 0.62
TRIM56-203ENST00000467847 PTGDRQ13258 359 aa18.95■□□□□ 0.62
TRIM56-203ENST00000467847 DMP1Q13316 513 aaPredicted RBP18.95■□□□□ 0.62
TRIM56-203ENST00000467847 ZNF568Q3ZCX4 644 aa18.95■□□□□ 0.62
TRIM56-203ENST00000467847 RSPO2Q6UXX9 243 aaPredicted RBP18.95■□□□□ 0.62
TRIM56-203ENST00000467847 ANKS3Q6ZW76 656 aa18.95■□□□□ 0.62
TRIM56-203ENST00000467847 CEP120Q8N960 986 aa18.95■□□□□ 0.62
TRIM56-203ENST00000467847 IGSF22Q8N9C0 903 aa18.95■□□□□ 0.62
TRIM56-203ENST00000467847 CDT1Q9H211 546 aa18.95■□□□□ 0.62
TRIM56-203ENST00000467847 SH2B1Q9NRF2 756 aaPredicted RBP18.95■□□□□ 0.62
TRIM56-203ENST00000467847 HCFC1R1Q9NWW0 138 aa18.95■□□□□ 0.62
TRIM56-203ENST00000467847 DNM3Q9UQ16 869 aa18.95■□□□□ 0.62
TRIM56-203ENST00000467847 BACE2Q9Y5Z0 518 aa18.95■□□□□ 0.62
TRIM56-203ENST00000467847 ZNF292O60281 2723 aa18.95■□□□□ 0.62
TRIM56-203ENST00000467847 E9PMD0 336 aa18.94■□□□□ 0.62
TRIM56-203ENST00000467847 HIP1RO75146 1068 aa18.94■□□□□ 0.62
TRIM56-203ENST00000467847 U2AF2P26368 475 aaKnown RBP eCLIP18.94■□□□□ 0.62
TRIM56-203ENST00000467847 GRM5P41594 1212 aa18.94■□□□□ 0.62
TRIM56-203ENST00000467847 TOB1P50616 345 aaPredicted RBP18.94■□□□□ 0.62
TRIM56-203ENST00000467847 PABPC1LQ4VXU2 614 aaKnown RBP18.94■□□□□ 0.62
TRIM56-203ENST00000467847 ERICH6BQ5W0A0 696 aa18.94■□□□□ 0.62
TRIM56-203ENST00000467847 KRT79Q5XKE5 535 aa18.94■□□□□ 0.62
TRIM56-203ENST00000467847 CD300LGQ6UXG3 332 aa18.94■□□□□ 0.62
TRIM56-203ENST00000467847 C3orf58Q8NDZ4 430 aa18.94■□□□□ 0.62
TRIM56-203ENST00000467847 PJA1Q8NG27 643 aa18.94■□□□□ 0.62
TRIM56-203ENST00000467847 DDX27Q96GQ7 796 aaKnown RBP18.94■□□□□ 0.62
TRIM56-203ENST00000467847 SHDQ96IW2 340 aa18.94■□□□□ 0.62
TRIM56-203ENST00000467847 ACO2Q99798 780 aaKnown RBP18.94■□□□□ 0.62
TRIM56-203ENST00000467847 HINFPQ9BQA5 517 aa18.94■□□□□ 0.62
TRIM56-203ENST00000467847 MRPL4Q9BYD3 311 aaKnown RBP18.94■□□□□ 0.62
TRIM56-203ENST00000467847 FOXQ1Q9C009 403 aa18.94■□□□□ 0.62
TRIM56-203ENST00000467847 DNMT3BQ9UBC3 853 aaKnown RBP18.94■□□□□ 0.62
TRIM56-203ENST00000467847 PCDHB6Q9Y5E3 794 aa18.94■□□□□ 0.62
TRIM56-203ENST00000467847 CACNA1IQ9P0X4 2223 aa18.93■□□□□ 0.62
TRIM56-203ENST00000467847 MED19A0JLT2 244 aaPredicted RBP18.93■□□□□ 0.62
TRIM56-203ENST00000467847 PP2D1A8MPX8 630 aa18.93■□□□□ 0.62
TRIM56-203ENST00000467847 LMNAP02545 664 aaKnown RBP18.93■□□□□ 0.62
TRIM56-203ENST00000467847 BRCC3P46736 316 aa18.93■□□□□ 0.62
TRIM56-203ENST00000467847 SOX4Q06945 474 aaPredicted RBP18.93■□□□□ 0.62
TRIM56-203ENST00000467847 ALKAL1Q6UXT8 129 aa18.93■□□□□ 0.62
TRIM56-203ENST00000467847 RTL10Q7L3V2 364 aa18.93■□□□□ 0.62
TRIM56-203ENST00000467847 NPAS3Q8IXF0 933 aa18.93■□□□□ 0.62
TRIM56-203ENST00000467847 DAW1Q8N136 415 aa18.93■□□□□ 0.62
TRIM56-203ENST00000467847 RMDN1Q96DB5 314 aa18.93■□□□□ 0.62
TRIM56-203ENST00000467847 DRC1Q96MC2 740 aa18.93■□□□□ 0.62
TRIM56-203ENST00000467847 TCHPQ9BT92 498 aa18.93■□□□□ 0.62
TRIM56-203ENST00000467847 RUSC1Q9BVN2 902 aa18.93■□□□□ 0.62
TRIM56-203ENST00000467847 TARS2Q9BW92 718 aaKnown RBP18.93■□□□□ 0.62
TRIM56-203ENST00000467847 SEMA4AQ9H3S1 761 aa18.93■□□□□ 0.62
TRIM56-203ENST00000467847 TMEM134Q9H6X4 195 aa18.93■□□□□ 0.62
TRIM56-203ENST00000467847 PTPRHQ9HD43 1115 aa18.93■□□□□ 0.62
TRIM56-203ENST00000467847 KMT5AQ9NQR1 393 aa18.93■□□□□ 0.62
TRIM56-203ENST00000467847 SLC38A7Q9NVC3 462 aa18.93■□□□□ 0.62
TRIM56-203ENST00000467847 DLGAP2Q9P1A6 1054 aa18.93■□□□□ 0.62
TRIM56-203ENST00000467847 ARHGAP28Q9P2N2 729 aa18.93■□□□□ 0.62
TRIM56-203ENST00000467847 KCNH3Q9ULD8 1083 aa18.93■□□□□ 0.62
TRIM56-203ENST00000467847 MYH11P35749 1972 aa18.93■□□□□ 0.62
TRIM56-203ENST00000467847 LAD1O00515 517 aa18.92■□□□□ 0.62
TRIM56-203ENST00000467847 STARD6P59095 220 aa18.92■□□□□ 0.62
TRIM56-203ENST00000467847 SNW1Q13573 536 aaKnown RBP18.92■□□□□ 0.62
TRIM56-203ENST00000467847 XKR4Q5GH76 650 aa18.92■□□□□ 0.62
TRIM56-203ENST00000467847 KIAA2013Q8IYS2 634 aa18.92■□□□□ 0.62
TRIM56-203ENST00000467847 ING5Q8WYH8 240 aa18.92■□□□□ 0.62
TRIM56-203ENST00000467847 KXD1Q9BQD3 176 aa18.92■□□□□ 0.62
TRIM56-203ENST00000467847 RBM19Q9Y4C8 960 aaKnown RBP18.92■□□□□ 0.62
TRIM56-203ENST00000467847 R4GN57 208 aa18.92■□□□□ 0.62
TRIM56-203ENST00000467847 PODXLO00592 558 aa18.91■□□□□ 0.62
TRIM56-203ENST00000467847 MCF2P10911 925 aa18.91■□□□□ 0.62
TRIM56-203ENST00000467847 CDC25AP30304 524 aa18.91■□□□□ 0.62
TRIM56-203ENST00000467847 IL17AQ16552 155 aa18.91■□□□□ 0.62
TRIM56-203ENST00000467847 VARS2Q5ST30 1063 aaKnown RBP18.91■□□□□ 0.62
TRIM56-203ENST00000467847 SLC8B1Q6J4K2 584 aa18.91■□□□□ 0.62
TRIM56-203ENST00000467847 RINT1Q6NUQ1 792 aa18.91■□□□□ 0.62
TRIM56-203ENST00000467847 DTHD1Q6ZMT9 781 aa18.91■□□□□ 0.62
TRIM56-203ENST00000467847 TAS1R3Q7RTX0 852 aa18.91■□□□□ 0.62
TRIM56-203ENST00000467847 C1orf210Q8IVY1 113 aa18.91■□□□□ 0.62
TRIM56-203ENST00000467847 ZMAT2Q96NC0 199 aaKnown RBP18.91■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms