RNA–Protein interactions for RNA: ENST00000467733.1

SSR3-204, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 2

Gene SSR3, Length 873 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-204ENST00000467733 FOCADQ5VW36 1801 aa5.13□□□□□ -1.59
SSR3-204ENST00000467733 C5orf42Q9H799 3197 aa5.12□□□□□ -1.59
SSR3-204ENST00000467733 B2RBV5 119 aa5.12□□□□□ -1.59
SSR3-204ENST00000467733 SUSD5O60279 629 aa5.12□□□□□ -1.59
SSR3-204ENST00000467733 ZNF623O75123 536 aa5.12□□□□□ -1.59
SSR3-204ENST00000467733 ENTPD3O75355 529 aa5.12□□□□□ -1.59
SSR3-204ENST00000467733 GJB6O95452 261 aa5.12□□□□□ -1.59
SSR3-204ENST00000467733 FPR2P25090 351 aa5.12□□□□□ -1.59
SSR3-204ENST00000467733 MAPK4P31152 587 aa5.12□□□□□ -1.59
SSR3-204ENST00000467733 GTF2F1P35269 517 aaKnown RBP eCLIP5.12□□□□□ -1.59
SSR3-204ENST00000467733 RGS2P41220 211 aa5.12□□□□□ -1.59
SSR3-204ENST00000467733 RGS3P49796 1198 aa5.12□□□□□ -1.59
SSR3-204ENST00000467733 HMGCS2P54868 508 aa5.12□□□□□ -1.59
SSR3-204ENST00000467733 IRX3P78415 501 aaPredicted RBP5.12□□□□□ -1.59
SSR3-204ENST00000467733 PURAQ00577 322 aaKnown RBP5.12□□□□□ -1.59
SSR3-204ENST00000467733 CCL14Q16627 93 aa5.12□□□□□ -1.59
SSR3-204ENST00000467733 DDR2Q16832 855 aa5.12□□□□□ -1.59
SSR3-204ENST00000467733 INF2Q27J81 1249 aa5.12□□□□□ -1.59
SSR3-204ENST00000467733 WDR66Q8TBY9 1149 aa5.12□□□□□ -1.59
SSR3-204ENST00000467733 LPAR1Q92633 364 aa5.12□□□□□ -1.59
SSR3-204ENST00000467733 TRMT2BQ96GJ1 504 aaKnown RBP5.12□□□□□ -1.59
SSR3-204ENST00000467733 ZSWIM3Q96MP5 696 aa5.12□□□□□ -1.59
SSR3-204ENST00000467733 LRFN3Q9BTN0 628 aa5.12□□□□□ -1.59
SSR3-204ENST00000467733 IDI2Q9BXS1 227 aa5.12□□□□□ -1.59
SSR3-204ENST00000467733 CYP26B1Q9NR63 512 aa5.12□□□□□ -1.59
SSR3-204ENST00000467733 ST7Q9NRC1 585 aa5.12□□□□□ -1.59
SSR3-204ENST00000467733 APEX2Q9UBZ4 518 aa5.12□□□□□ -1.59
SSR3-204ENST00000467733 DDX20Q9UHI6 824 aaKnown RBP5.12□□□□□ -1.59
SSR3-204ENST00000467733 UTYO14607 1347 aa5.12□□□□□ -1.59
SSR3-204ENST00000467733 MYBBP1AQ9BQG0 1328 aaKnown RBP5.12□□□□□ -1.59
SSR3-204ENST00000467733 A0A0G2JMZ2 1700 aa5.11□□□□□ -1.59
SSR3-204ENST00000467733 ZNFX1Q9P2E3 1918 aaKnown RBP5.11□□□□□ -1.59
SSR3-204ENST00000467733 USP34Q70CQ2 3546 aa5.11□□□□□ -1.59
SSR3-204ENST00000467733 TRIM43BA6NCK2 446 aa5.11□□□□□ -1.59
SSR3-204ENST00000467733 KBTBD13C9JR72 458 aa5.11□□□□□ -1.59
SSR3-204ENST00000467733 GRM8O00222 908 aa5.11□□□□□ -1.59
SSR3-204ENST00000467733 PRDX5P30044 214 aa5.11□□□□□ -1.59
SSR3-204ENST00000467733 MLLT6P55198 1093 aaPredicted RBP5.11□□□□□ -1.59
SSR3-204ENST00000467733 HERVK_113P62684 666 aa5.11□□□□□ -1.59
SSR3-204ENST00000467733 KCNAB2Q13303 367 aa5.11□□□□□ -1.59
SSR3-204ENST00000467733 RAB33AQ14088 237 aa5.11□□□□□ -1.59
SSR3-204ENST00000467733 WDR43Q15061 677 aaKnown RBP eCLIP5.11□□□□□ -1.59
SSR3-204ENST00000467733 TRIM60Q495X7 471 aa5.11□□□□□ -1.59
SSR3-204ENST00000467733 TMEM31Q5JXX7 168 aa5.11□□□□□ -1.59
SSR3-204ENST00000467733 MFSD14CQ5VZR4 134 aa5.11□□□□□ -1.59
SSR3-204ENST00000467733 GPR142Q7Z601 462 aa5.11□□□□□ -1.59
SSR3-204ENST00000467733 TRIM59Q8IWR1 403 aa5.11□□□□□ -1.59
SSR3-204ENST00000467733 ZNF513Q8N8E2 541 aaPredicted RBP5.11□□□□□ -1.59
SSR3-204ENST00000467733 VGLL2Q8N8G2 317 aa5.11□□□□□ -1.59
SSR3-204ENST00000467733 GPRC5AQ8NFJ5 357 aa5.11□□□□□ -1.59
SSR3-204ENST00000467733 ZCCHC14Q8WYQ9 949 aaKnown RBP5.11□□□□□ -1.59
SSR3-204ENST00000467733 TRIM43Q96BQ3 446 aaPredicted RBP5.11□□□□□ -1.59
SSR3-204ENST00000467733 TIFAQ96CG3 184 aa5.11□□□□□ -1.59
SSR3-204ENST00000467733 WWC2-AS2Q96NR7 200 aa5.11□□□□□ -1.59
SSR3-204ENST00000467733 PUS3Q9BZE2 481 aaKnown RBP5.11□□□□□ -1.59
SSR3-204ENST00000467733 MEGF9Q9H1U4 602 aa5.11□□□□□ -1.59
SSR3-204ENST00000467733 PORCNQ9H237 461 aa5.11□□□□□ -1.59
SSR3-204ENST00000467733 TXNRD2Q9NNW7 524 aa5.11□□□□□ -1.59
SSR3-204ENST00000467733 CROTQ9UKG9 612 aa5.11□□□□□ -1.59
SSR3-204ENST00000467733 HSFX4A0A1B0GTS1 333 aaPredicted RBP5.1□□□□□ -1.59
SSR3-204ENST00000467733 HSFX3A0A1B0GWH4 333 aaPredicted RBP5.1□□□□□ -1.59
SSR3-204ENST00000467733 DDTLA6NHG4 134 aaPredicted RBP5.1□□□□□ -1.59
SSR3-204ENST00000467733 HGSO14964 777 aaPredicted RBP5.1□□□□□ -1.59
SSR3-204ENST00000467733 GAKO14976 1311 aa5.1□□□□□ -1.59
SSR3-204ENST00000467733 KLF4O43474 513 aa5.1□□□□□ -1.59
SSR3-204ENST00000467733 B4GALT4O60513 344 aa5.1□□□□□ -1.59
SSR3-204ENST00000467733 CACNA1HO95180 2353 aa5.1□□□□□ -1.59
SSR3-204ENST00000467733 PDE8BO95263 885 aa5.1□□□□□ -1.59
SSR3-204ENST00000467733 IFIT1P09914 478 aaKnown RBP5.1□□□□□ -1.59
SSR3-204ENST00000467733 CYBAP13498 195 aa5.1□□□□□ -1.59
SSR3-204ENST00000467733 HOXA7P31268 230 aaPredicted RBP5.1□□□□□ -1.59
SSR3-204ENST00000467733 ZEB1P37275 1124 aaPredicted RBP5.1□□□□□ -1.59
SSR3-204ENST00000467733 FPGSQ05932 587 aa5.1□□□□□ -1.59
SSR3-204ENST00000467733 NFATC3Q12968 1075 aa5.1□□□□□ -1.59
SSR3-204ENST00000467733 SPP2Q13103 211 aa5.1□□□□□ -1.59
SSR3-204ENST00000467733 RALBP1Q15311 655 aa5.1□□□□□ -1.59
SSR3-204ENST00000467733 PUM3Q15397 648 aaKnown RBP5.1□□□□□ -1.59
SSR3-204ENST00000467733 METTL24Q5JXM2 366 aa5.1□□□□□ -1.59
SSR3-204ENST00000467733 BEND3Q5T5X7 828 aa5.1□□□□□ -1.59
SSR3-204ENST00000467733 GTF2IRD2BQ6EKJ0 949 aa5.1□□□□□ -1.59
SSR3-204ENST00000467733 TRMT10BQ6PF06 316 aaKnown RBP5.1□□□□□ -1.59
SSR3-204ENST00000467733 TEPPQ6URK8 271 aa5.1□□□□□ -1.59
SSR3-204ENST00000467733 SLC39A5Q6ZMH5 540 aa5.1□□□□□ -1.59
SSR3-204ENST00000467733 CEP68Q76N32 757 aa5.1□□□□□ -1.59
SSR3-204ENST00000467733 GTF2IRD2Q86UP8 949 aa5.1□□□□□ -1.59
SSR3-204ENST00000467733 CELF2-AS1Q8N7Q2 184 aa5.1□□□□□ -1.59
SSR3-204ENST00000467733 ARRDC4Q8NCT1 418 aa5.1□□□□□ -1.59
SSR3-204ENST00000467733 NPLOC4Q8TAT6 608 aa5.1□□□□□ -1.59
SSR3-204ENST00000467733 Q8TCH9 128 aa5.1□□□□□ -1.59
SSR3-204ENST00000467733 MICAL1Q8TDZ2 1067 aa5.1□□□□□ -1.59
SSR3-204ENST00000467733 PPM1EQ8WY54 764 aa5.1□□□□□ -1.59
SSR3-204ENST00000467733 TMEM169Q96HH4 297 aa5.1□□□□□ -1.59
SSR3-204ENST00000467733 OSBPL5Q9H0X9 879 aaPredicted RBP5.1□□□□□ -1.59
SSR3-204ENST00000467733 NKX2-4Q9H2Z4 354 aa5.1□□□□□ -1.59
SSR3-204ENST00000467733 PRDM12Q9H4Q4 367 aa5.1□□□□□ -1.59
SSR3-204ENST00000467733 DDX4Q9NQI0 724 aaKnown RBP5.1□□□□□ -1.59
SSR3-204ENST00000467733 SALL1Q9NSC2 1324 aa5.1□□□□□ -1.59
SSR3-204ENST00000467733 PCDHB4Q9Y5E5 795 aa5.1□□□□□ -1.59
SSR3-204ENST00000467733 COL4A4P53420 1690 aaPredicted RBP5.09□□□□□ -1.59
SSR3-204ENST00000467733 KIAA0355O15063 1070 aa5.09□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms