RNA–Protein interactions for RNA: ENST00000467560.5

ATPAF2-204, Transcript of ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

TSL 2

Gene ATPAF2, Length 567 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2-204ENST00000467560 PLS3P13797 630 aa16.19■□□□□ 0.18
ATPAF2-204ENST00000467560 TKTP29401 623 aaKnown RBP16.19■□□□□ 0.18
ATPAF2-204ENST00000467560 PTPN5P54829 565 aa16.19■□□□□ 0.18
ATPAF2-204ENST00000467560 CREMQ03060 361 aa16.19■□□□□ 0.18
ATPAF2-204ENST00000467560 CWF19L1Q69YN2 538 aaKnown RBP16.19■□□□□ 0.18
ATPAF2-204ENST00000467560 MPZL3Q6UWV2 235 aa16.19■□□□□ 0.18
ATPAF2-204ENST00000467560 CYP26C1Q6V0L0 522 aa16.19■□□□□ 0.18
ATPAF2-204ENST00000467560 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.19■□□□□ 0.18
ATPAF2-204ENST00000467560 SPIRE2Q8WWL2 714 aa16.19■□□□□ 0.18
ATPAF2-204ENST00000467560 DDX27Q96GQ7 796 aaKnown RBP16.19■□□□□ 0.18
ATPAF2-204ENST00000467560 PIDD1Q9HB75 910 aa16.19■□□□□ 0.18
ATPAF2-204ENST00000467560 EPS15L1Q9UBC2 864 aa16.19■□□□□ 0.18
ATPAF2-204ENST00000467560 RBM19Q9Y4C8 960 aaKnown RBP16.19■□□□□ 0.18
ATPAF2-204ENST00000467560 MTCL1Q9Y4B5 1905 aaKnown RBP16.18■□□□□ 0.18
ATPAF2-204ENST00000467560 C8AP07357 584 aa16.18■□□□□ 0.18
ATPAF2-204ENST00000467560 OR1D2P34982 312 aa16.18■□□□□ 0.18
ATPAF2-204ENST00000467560 LARP1BQ659C4 914 aaKnown RBP16.18■□□□□ 0.18
ATPAF2-204ENST00000467560 ARL6IP4Q66PJ3 421 aaKnown RBP16.18■□□□□ 0.18
ATPAF2-204ENST00000467560 GET4Q7L5D6 327 aaPredicted RBP16.18■□□□□ 0.18
ATPAF2-204ENST00000467560 GRASPQ7Z6J2 395 aaPredicted RBP16.18■□□□□ 0.18
ATPAF2-204ENST00000467560 TCHPQ9BT92 498 aa16.18■□□□□ 0.18
ATPAF2-204ENST00000467560 CCDC94Q9BW85 323 aaPredicted RBP16.18■□□□□ 0.18
ATPAF2-204ENST00000467560 C17orf75Q9HAS0 396 aa16.18■□□□□ 0.18
ATPAF2-204ENST00000467560 BLOC1S4Q9NUP1 217 aa16.18■□□□□ 0.18
ATPAF2-204ENST00000467560 ANKFY1Q9P2R3 1169 aa16.18■□□□□ 0.18
ATPAF2-204ENST00000467560 MTRRQ9UBK8 725 aa16.18■□□□□ 0.18
ATPAF2-204ENST00000467560 DUSP12Q9UNI6 340 aa16.18■□□□□ 0.18
ATPAF2-204ENST00000467560 CDY1Q9Y6F8 540 aa16.18■□□□□ 0.18
ATPAF2-204ENST00000467560 VPS13AQ96RL7 3174 aa16.18■□□□□ 0.18
ATPAF2-204ENST00000467560 H0Y858 1186 aa16.17■□□□□ 0.18
ATPAF2-204ENST00000467560 CCL16O15467 120 aa16.17■□□□□ 0.18
ATPAF2-204ENST00000467560 PI15O43692 258 aa16.17■□□□□ 0.18
ATPAF2-204ENST00000467560 LAMP2P13473 410 aa16.17■□□□□ 0.18
ATPAF2-204ENST00000467560 KCNE1P15382 129 aa16.17■□□□□ 0.18
ATPAF2-204ENST00000467560 ELAVL2Q12926 359 aaKnown RBP16.17■□□□□ 0.18
ATPAF2-204ENST00000467560 RAB33AQ14088 237 aa16.17■□□□□ 0.18
ATPAF2-204ENST00000467560 SLC10A6Q3KNW5 377 aa16.17■□□□□ 0.18
ATPAF2-204ENST00000467560 ELMSAN1Q6PJG2 1045 aa16.17■□□□□ 0.18
ATPAF2-204ENST00000467560 SLC44A3Q8N4M1 653 aa16.17■□□□□ 0.18
ATPAF2-204ENST00000467560 SLC7A14Q8TBB6 771 aa16.17■□□□□ 0.18
ATPAF2-204ENST00000467560 STAMQ92783 540 aa16.17■□□□□ 0.18
ATPAF2-204ENST00000467560 UROC1Q96N76 676 aa16.17■□□□□ 0.18
ATPAF2-204ENST00000467560 ACAP3Q96P50 834 aa16.17■□□□□ 0.18
ATPAF2-204ENST00000467560 RPP25Q9BUL9 199 aaKnown RBP16.17■□□□□ 0.18
ATPAF2-204ENST00000467560 TIPINQ9BVW5 301 aa16.17■□□□□ 0.18
ATPAF2-204ENST00000467560 CNTN3Q9P232 1028 aa16.17■□□□□ 0.18
ATPAF2-204ENST00000467560 IGSF9Q9P2J2 1179 aa16.17■□□□□ 0.18
ATPAF2-204ENST00000467560 PODXLO00592 558 aa16.16■□□□□ 0.18
ATPAF2-204ENST00000467560 CFHP08603 1231 aa16.16■□□□□ 0.18
ATPAF2-204ENST00000467560 MCM2P49736 904 aa16.16■□□□□ 0.18
ATPAF2-204ENST00000467560 YARSP54577 528 aaKnown RBP16.16■□□□□ 0.18
ATPAF2-204ENST00000467560 SPAG1Q07617 926 aa16.16■□□□□ 0.18
ATPAF2-204ENST00000467560 DHX8Q14562 1220 aaKnown RBP16.16■□□□□ 0.18
ATPAF2-204ENST00000467560 KARSQ15046 597 aaKnown RBP16.16■□□□□ 0.18
ATPAF2-204ENST00000467560 ZBTB41Q5SVQ8 909 aa16.16■□□□□ 0.18
ATPAF2-204ENST00000467560 AXDND1Q5T1B0 1012 aaPredicted RBP16.16■□□□□ 0.18
ATPAF2-204ENST00000467560 ASTLQ6HA08 431 aaPredicted RBP16.16■□□□□ 0.18
ATPAF2-204ENST00000467560 POTEHQ6S545 545 aa16.16■□□□□ 0.18
ATPAF2-204ENST00000467560 APBB1IPQ7Z5R6 666 aaPredicted RBP16.16■□□□□ 0.18
ATPAF2-204ENST00000467560 SIX5Q8N196 739 aa16.16■□□□□ 0.18
ATPAF2-204ENST00000467560 FLCNQ8NFG4 579 aa16.16■□□□□ 0.18
ATPAF2-204ENST00000467560 ITFG1Q8TB96 612 aa16.16■□□□□ 0.18
ATPAF2-204ENST00000467560 REEP2Q9BRK0 252 aa16.16■□□□□ 0.18
ATPAF2-204ENST00000467560 UPF2Q9HAU5 1272 aaKnown RBP16.16■□□□□ 0.18
ATPAF2-204ENST00000467560 TOPORSQ9NS56 1045 aaPredicted RBP16.16■□□□□ 0.18
ATPAF2-204ENST00000467560 HCFC1R1Q9NWW0 138 aa16.16■□□□□ 0.18
ATPAF2-204ENST00000467560 TUBGCP4Q9UGJ1 667 aa16.16■□□□□ 0.18
ATPAF2-204ENST00000467560 KRBA1A5PL33 1030 aa16.15■□□□□ 0.18
ATPAF2-204ENST00000467560 ANHXE9PGG2 379 aa16.15■□□□□ 0.18
ATPAF2-204ENST00000467560 GALR2O43603 387 aaPredicted RBP16.15■□□□□ 0.18
ATPAF2-204ENST00000467560 TOM1L1O75674 476 aa16.15■□□□□ 0.18
ATPAF2-204ENST00000467560 FSHRP23945 695 aa16.15■□□□□ 0.18
ATPAF2-204ENST00000467560 NCKAP1LP55160 1127 aa16.15■□□□□ 0.18
ATPAF2-204ENST00000467560 CUL4AQ13619 759 aa16.15■□□□□ 0.18
ATPAF2-204ENST00000467560 HTR4Q13639 388 aa16.15■□□□□ 0.18
ATPAF2-204ENST00000467560 MCM6Q14566 821 aa16.15■□□□□ 0.18
ATPAF2-204ENST00000467560 NOLC1Q14978 699 aaKnown RBP eCLIP16.15■□□□□ 0.18
ATPAF2-204ENST00000467560 SF3A1Q15459 793 aaKnown RBP16.15■□□□□ 0.18
ATPAF2-204ENST00000467560 PPM1LQ5SGD2 360 aa16.15■□□□□ 0.18
ATPAF2-204ENST00000467560 VARS2Q5ST30 1063 aaKnown RBP16.15■□□□□ 0.18
ATPAF2-204ENST00000467560 LIN9Q5TKA1 542 aa16.15■□□□□ 0.18
ATPAF2-204ENST00000467560 USP49Q70CQ1 688 aa16.15■□□□□ 0.18
ATPAF2-204ENST00000467560 CDK5RAP3Q96JB5 506 aa16.15■□□□□ 0.18
ATPAF2-204ENST00000467560 PRRX2Q99811 253 aa16.15■□□□□ 0.18
ATPAF2-204ENST00000467560 KCND2Q9NZV8 630 aa16.15■□□□□ 0.18
ATPAF2-204ENST00000467560 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.15■□□□□ 0.18
ATPAF2-204ENST00000467560 BACE2Q9Y5Z0 518 aa16.15■□□□□ 0.18
ATPAF2-204ENST00000467560 NUMBLQ9Y6R0 609 aa16.15■□□□□ 0.18
ATPAF2-204ENST00000467560 FAM189A1O60320 539 aa16.14■□□□□ 0.17
ATPAF2-204ENST00000467560 TBC1D4O60343 1298 aa16.14■□□□□ 0.17
ATPAF2-204ENST00000467560 HNRNPA1P09651 372 aaKnown RBP eCLIP16.14■□□□□ 0.17
ATPAF2-204ENST00000467560 CXCL8P10145 99 aa16.14■□□□□ 0.17
ATPAF2-204ENST00000467560 PLCG1P19174 1290 aa16.14■□□□□ 0.17
ATPAF2-204ENST00000467560 TNFSF9P41273 254 aa16.14■□□□□ 0.17
ATPAF2-204ENST00000467560 ROR1Q01973 937 aa16.14■□□□□ 0.17
ATPAF2-204ENST00000467560 MCL1Q07820 350 aa16.14■□□□□ 0.17
ATPAF2-204ENST00000467560 STRN3Q13033 797 aa16.14■□□□□ 0.17
ATPAF2-204ENST00000467560 FAM173BQ6P4H8 233 aa16.14■□□□□ 0.17
ATPAF2-204ENST00000467560 PDXDC1Q6P996 788 aa16.14■□□□□ 0.17
ATPAF2-204ENST00000467560 PARM1Q6UWI2 310 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 119 ms