RNA–Protein interactions for RNA: ENST00000467044.1

NUP188-204, Transcript of nucleoporin 188, humanhuman

TSL 2

Gene NUP188, Length 584 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-204ENST00000467044 UBXN1Q04323 297 aa11.63□□□□□ -0.55
NUP188-204ENST00000467044 ENPEPQ07075 957 aa11.63□□□□□ -0.55
NUP188-204ENST00000467044 PPP3CAQ08209 521 aa11.63□□□□□ -0.55
NUP188-204ENST00000467044 BIRC3Q13489 604 aa11.63□□□□□ -0.55
NUP188-204ENST00000467044 TMEM132DQ14C87 1099 aa11.63□□□□□ -0.55
NUP188-204ENST00000467044 DUOXA2Q1HG44 320 aa11.63□□□□□ -0.55
NUP188-204ENST00000467044 MIIPQ5JXC2 388 aa11.63□□□□□ -0.55
NUP188-204ENST00000467044 TMEM240Q5SV17 173 aa11.63□□□□□ -0.55
NUP188-204ENST00000467044 C1orf220Q5T0J3 134 aa11.63□□□□□ -0.55
NUP188-204ENST00000467044 FKBP15Q5T1M5 1219 aa11.63□□□□□ -0.55
NUP188-204ENST00000467044 PSRC1Q6PGN9 363 aaPredicted RBP11.63□□□□□ -0.55
NUP188-204ENST00000467044 GLB1LQ6UWU2 654 aa11.63□□□□□ -0.55
NUP188-204ENST00000467044 ALKAL1Q6UXT8 129 aa11.63□□□□□ -0.55
NUP188-204ENST00000467044 APTXQ7Z2E3 356 aaKnown RBP11.63□□□□□ -0.55
NUP188-204ENST00000467044 NPAS4Q8IUM7 802 aa11.63□□□□□ -0.55
NUP188-204ENST00000467044 WDR49Q8IV35 697 aa11.63□□□□□ -0.55
NUP188-204ENST00000467044 EFCAB13Q8IY85 973 aa11.63□□□□□ -0.55
NUP188-204ENST00000467044 ABI1Q8IZP0 508 aa11.63□□□□□ -0.55
NUP188-204ENST00000467044 OR5B17Q8NGF7 314 aa11.63□□□□□ -0.55
NUP188-204ENST00000467044 HELQQ8TDG4 1101 aa11.63□□□□□ -0.55
NUP188-204ENST00000467044 ZNF516Q92618 1163 aa11.63□□□□□ -0.55
NUP188-204ENST00000467044 FAM84AQ96KN4 292 aa11.63□□□□□ -0.55
NUP188-204ENST00000467044 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.63□□□□□ -0.557e-8■■■■■ 32.7
NUP188-204ENST00000467044 XPO4Q9C0E2 1151 aaKnown RBP11.63□□□□□ -0.55
NUP188-204ENST00000467044 INTS13Q9NVM9 706 aa11.63□□□□□ -0.55
NUP188-204ENST00000467044 CNTN3Q9P232 1028 aa11.63□□□□□ -0.55
NUP188-204ENST00000467044 PTPRJQ12913 1337 aa11.62□□□□□ -0.55
NUP188-204ENST00000467044 RALGAPA2Q2PPJ7 1873 aa11.62□□□□□ -0.55
NUP188-204ENST00000467044 A0A1B0GTH6 734 aa11.62□□□□□ -0.55
NUP188-204ENST00000467044 SMIM28A0A1B0GU29 152 aa11.62□□□□□ -0.55
NUP188-204ENST00000467044 LGALS16A8MUM7 142 aa11.62□□□□□ -0.55
NUP188-204ENST00000467044 TEX33O43247 280 aa11.62□□□□□ -0.55
NUP188-204ENST00000467044 XPOTO43592 962 aaKnown RBP11.62□□□□□ -0.55
NUP188-204ENST00000467044 N4BP1O75113 896 aaKnown RBP11.62□□□□□ -0.55
NUP188-204ENST00000467044 OFD1O75665 1012 aa11.62□□□□□ -0.55
NUP188-204ENST00000467044 CLSTN1O94985 981 aa11.62□□□□□ -0.55
NUP188-204ENST00000467044 POMCP01189 267 aa11.62□□□□□ -0.55
NUP188-204ENST00000467044 THP07101 528 aa11.62□□□□□ -0.55
NUP188-204ENST00000467044 GTF2H1P32780 548 aa11.62□□□□□ -0.55
NUP188-204ENST00000467044 MXI1P50539 228 aa11.62□□□□□ -0.55
NUP188-204ENST00000467044 SCNN1GP51170 649 aa11.62□□□□□ -0.55
NUP188-204ENST00000467044 AFF1P51825 1210 aaKnown RBP11.62□□□□□ -0.55
NUP188-204ENST00000467044 AP3M2P53677 418 aa11.62□□□□□ -0.55
NUP188-204ENST00000467044 WDR5P61964 334 aaKnown RBP11.62□□□□□ -0.55
NUP188-204ENST00000467044 DEFB103AP81534 67 aa11.62□□□□□ -0.55
NUP188-204ENST00000467044 MYL7Q01449 175 aa11.62□□□□□ -0.55
NUP188-204ENST00000467044 CBWD6Q4V339 395 aa11.62□□□□□ -0.55
NUP188-204ENST00000467044 CBWD3Q5JTY5 395 aa11.62□□□□□ -0.55
NUP188-204ENST00000467044 CBWD5Q5RIA9 395 aa11.62□□□□□ -0.55
NUP188-204ENST00000467044 KRT39Q6A163 491 aa11.62□□□□□ -0.55
NUP188-204ENST00000467044 FAM117BQ6P1L5 589 aa11.62□□□□□ -0.55
NUP188-204ENST00000467044 SARM1Q6SZW1 724 aa11.62□□□□□ -0.55
NUP188-204ENST00000467044 SV2AQ7L0J3 742 aa11.62□□□□□ -0.55
NUP188-204ENST00000467044 NT5DC4Q86YG4 428 aa11.62□□□□□ -0.55
NUP188-204ENST00000467044 BEST2Q8NFU1 509 aa11.62□□□□□ -0.55
NUP188-204ENST00000467044 URGCPQ8TCY9 931 aa11.62□□□□□ -0.55
NUP188-204ENST00000467044 PCMTD1Q96MG8 357 aaPredicted RBP11.62□□□□□ -0.55
NUP188-204ENST00000467044 ZMAT2Q96NC0 199 aaKnown RBP11.62□□□□□ -0.55
NUP188-204ENST00000467044 MTMR12Q9C0I1 747 aa11.62□□□□□ -0.55
NUP188-204ENST00000467044 TMEM117Q9H0C3 514 aa11.62□□□□□ -0.55
NUP188-204ENST00000467044 TMEM8AQ9HCN3 771 aa11.62□□□□□ -0.55
NUP188-204ENST00000467044 RTN4Q9NQC3 1192 aaKnown RBP11.62□□□□□ -0.55
NUP188-204ENST00000467044 MIOSQ9NXC5 875 aa11.62□□□□□ -0.55
NUP188-204ENST00000467044 R3HCC1Q9Y3T6 440 aaKnown RBP11.62□□□□□ -0.55
NUP188-204ENST00000467044 TDRD15B5MCY1 1934 aaKnown RBP11.61□□□□□ -0.55
NUP188-204ENST00000467044 PTGESO14684 152 aa11.61□□□□□ -0.55
NUP188-204ENST00000467044 HOXA2O43364 376 aa11.61□□□□□ -0.55
NUP188-204ENST00000467044 C4BPAP04003 597 aaKnown RBP11.61□□□□□ -0.55
NUP188-204ENST00000467044 KRT19P08727 400 aa11.61□□□□□ -0.55
NUP188-204ENST00000467044 KCNE1P15382 129 aa11.61□□□□□ -0.55
NUP188-204ENST00000467044 MAGEA10P43363 369 aaPredicted RBP11.61□□□□□ -0.55
NUP188-204ENST00000467044 GATMP50440 423 aa11.61□□□□□ -0.55
NUP188-204ENST00000467044 GUCY2FP51841 1108 aa11.61□□□□□ -0.55
NUP188-204ENST00000467044 CLDN10P78369 228 aa11.61□□□□□ -0.55
NUP188-204ENST00000467044 CETN1Q12798 172 aa11.61□□□□□ -0.55
NUP188-204ENST00000467044 NR1I3Q14994 352 aa11.61□□□□□ -0.55
NUP188-204ENST00000467044 PTPN21Q16825 1174 aa11.61□□□□□ -0.55
NUP188-204ENST00000467044 XKR4Q5GH76 650 aa11.61□□□□□ -0.55
NUP188-204ENST00000467044 NOMO2Q5JPE7 1267 aa11.61□□□□□ -0.55
NUP188-204ENST00000467044 CLLU1OSQ5K130 101 aa11.61□□□□□ -0.55
NUP188-204ENST00000467044 TRAPPC11Q7Z392 1133 aa11.61□□□□□ -0.55
NUP188-204ENST00000467044 TMCO2Q7Z6W1 182 aaPredicted RBP11.61□□□□□ -0.55
NUP188-204ENST00000467044 TOP1MTQ969P6 601 aa11.61□□□□□ -0.55
NUP188-204ENST00000467044 C18orf25Q96B23 403 aaPredicted RBP11.61□□□□□ -0.55
NUP188-204ENST00000467044 CRACR2AQ9BSW2 395 aa11.61□□□□□ -0.55
NUP188-204ENST00000467044 DPP3Q9NY33 737 aa11.61□□□□□ -0.55
NUP188-204ENST00000467044 UBQLN1Q9UMX0 589 aaKnown RBP11.61□□□□□ -0.55
NUP188-204ENST00000467044 DERAQ9Y315 318 aa11.61□□□□□ -0.55
NUP188-204ENST00000467044 C2CD2Q9Y426 696 aa11.61□□□□□ -0.55
NUP188-204ENST00000467044 PDCD11Q14690 1871 aaKnown RBP11.61□□□□□ -0.55
NUP188-204ENST00000467044 TBKBP1A7MCY6 615 aa11.6□□□□□ -0.55
NUP188-204ENST00000467044 ADCY5O95622 1261 aa11.6□□□□□ -0.55
NUP188-204ENST00000467044 ITGB3P05106 788 aa11.6□□□□□ -0.55
NUP188-204ENST00000467044 PIK3CAP42336 1068 aa11.6□□□□□ -0.55
NUP188-204ENST00000467044 ZNF75DP51815 510 aa11.6□□□□□ -0.55
NUP188-204ENST00000467044 MCCD1P59942 119 aaPredicted RBP11.6□□□□□ -0.55
NUP188-204ENST00000467044 RNASELQ05823 741 aaKnown RBP11.6□□□□□ -0.55
NUP188-204ENST00000467044 GRIK3Q13003 919 aa11.6□□□□□ -0.55
NUP188-204ENST00000467044 TRPC3Q13507 836 aa11.6□□□□□ -0.55
NUP188-204ENST00000467044 ZBTB6Q15916 424 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms