RNA–Protein interactions for RNA: ENST00000466415.1

VPS16-206, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 2

Gene VPS16, Length 708 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-206ENST00000466415 SLC10A6Q3KNW5 377 aa13.1□□□□□ -0.31
VPS16-206ENST00000466415 C1orf53Q5VUE5 145 aa13.1□□□□□ -0.31
VPS16-206ENST00000466415 JADE1Q6IE81 842 aa13.1□□□□□ -0.31
VPS16-206ENST00000466415 RRAGAQ7L523 313 aa13.1□□□□□ -0.31
VPS16-206ENST00000466415 NT5DC4Q86YG4 428 aa13.1□□□□□ -0.31
VPS16-206ENST00000466415 EFCAB13Q8IY85 973 aa13.1□□□□□ -0.31
VPS16-206ENST00000466415 OR5B17Q8NGF7 314 aa13.1□□□□□ -0.31
VPS16-206ENST00000466415 OR8K1Q8NGG5 319 aa13.1□□□□□ -0.31
VPS16-206ENST00000466415 TAS1R2Q8TE23 839 aa13.1□□□□□ -0.31
VPS16-206ENST00000466415 ZNF516Q92618 1163 aa13.1□□□□□ -0.31
VPS16-206ENST00000466415 KIF12Q96FN5 646 aa13.1□□□□□ -0.31
VPS16-206ENST00000466415 ZNF830Q96NB3 372 aaPredicted RBP13.1□□□□□ -0.31
VPS16-206ENST00000466415 PANX2Q96RD6 677 aa13.1□□□□□ -0.31
VPS16-206ENST00000466415 IFIH1Q9BYX4 1025 aaKnown RBP13.1□□□□□ -0.31
VPS16-206ENST00000466415 PPP1R12CQ9BZL4 782 aa13.1□□□□□ -0.31
VPS16-206ENST00000466415 FBXL5Q9UKA1 691 aa13.1□□□□□ -0.31
VPS16-206ENST00000466415 DERAQ9Y315 318 aa13.1□□□□□ -0.31
VPS16-206ENST00000466415 COQ4Q9Y3A0 265 aa13.1□□□□□ -0.31
VPS16-206ENST00000466415 C2CD2Q9Y426 696 aa13.1□□□□□ -0.31
VPS16-206ENST00000466415 HES2Q9Y543 173 aa13.1□□□□□ -0.31
VPS16-206ENST00000466415 PCDHB2Q9Y5E7 798 aa13.1□□□□□ -0.31
VPS16-206ENST00000466415 FHOD1Q9Y613 1164 aa13.1□□□□□ -0.31
VPS16-206ENST00000466415 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.1□□□□□ -0.31
VPS16-206ENST00000466415 LRRC53A6NM62 1247 aa13.09□□□□□ -0.31
VPS16-206ENST00000466415 ZC3H11AO75152 810 aaKnown RBP eCLIP13.09□□□□□ -0.31
VPS16-206ENST00000466415 NOL4O94818 638 aa13.09□□□□□ -0.31
VPS16-206ENST00000466415 PARNO95453 639 aaKnown RBP13.09□□□□□ -0.31
VPS16-206ENST00000466415 KRT19P08727 400 aa13.09□□□□□ -0.31
VPS16-206ENST00000466415 AKAP5P24588 427 aa13.09□□□□□ -0.31
VPS16-206ENST00000466415 APBA1Q02410 837 aa13.09□□□□□ -0.31
VPS16-206ENST00000466415 NCOA4Q13772 614 aa13.09□□□□□ -0.31
VPS16-206ENST00000466415 RALGAPA2Q2PPJ7 1873 aa13.09□□□□□ -0.31
VPS16-206ENST00000466415 IQCEQ6IPM2 695 aa13.09□□□□□ -0.31
VPS16-206ENST00000466415 PDXDC1Q6P996 788 aa13.09□□□□□ -0.31
VPS16-206ENST00000466415 TRAF7Q6Q0C0 670 aa13.09□□□□□ -0.31
VPS16-206ENST00000466415 C15orf39Q6ZRI6 1047 aa13.09□□□□□ -0.31
VPS16-206ENST00000466415 TRAPPC11Q7Z392 1133 aa13.09□□□□□ -0.31
VPS16-206ENST00000466415 FMNL3Q8IVF7 1028 aa13.09□□□□□ -0.31
VPS16-206ENST00000466415 PPM1KQ8N3J5 372 aa13.09□□□□□ -0.31
VPS16-206ENST00000466415 BEST2Q8NFU1 509 aa13.09□□□□□ -0.31
VPS16-206ENST00000466415 PGBD4Q96DM1 585 aa13.09□□□□□ -0.31
VPS16-206ENST00000466415 FAM84AQ96KN4 292 aa13.09□□□□□ -0.31
VPS16-206ENST00000466415 FAM81BQ96LP2 452 aa13.09□□□□□ -0.31
VPS16-206ENST00000466415 RPS6KC1Q96S38 1066 aa13.09□□□□□ -0.31
VPS16-206ENST00000466415 BAG1Q99933 345 aaPredicted RBP13.09□□□□□ -0.31
VPS16-206ENST00000466415 ADAM2Q99965 735 aa13.09□□□□□ -0.31
VPS16-206ENST00000466415 NAA15Q9BXJ9 866 aaKnown RBP13.09□□□□□ -0.31
VPS16-206ENST00000466415 FTHL17Q9BXU8 183 aa13.09□□□□□ -0.31
VPS16-206ENST00000466415 KCNF1Q9H3M0 494 aa13.09□□□□□ -0.31
VPS16-206ENST00000466415 SIX2Q9NPC8 291 aa13.09□□□□□ -0.31
VPS16-206ENST00000466415 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.09□□□□□ -0.31
VPS16-206ENST00000466415 TMEM39AQ9NV64 488 aa13.09□□□□□ -0.31
VPS16-206ENST00000466415 DNAJC12Q9UKB3 198 aa13.09□□□□□ -0.31
VPS16-206ENST00000466415 CLTBP09497 229 aa13.08□□□□□ -0.32
VPS16-206ENST00000466415 SKILP12757 684 aa13.08□□□□□ -0.32
VPS16-206ENST00000466415 MSNP26038 577 aaKnown RBP13.08□□□□□ -0.32
VPS16-206ENST00000466415 FAAP100Q0VG06 881 aa13.08□□□□□ -0.32
VPS16-206ENST00000466415 DSC3Q14574 896 aa13.08□□□□□ -0.32
VPS16-206ENST00000466415 ASIC2Q16515 512 aa13.08□□□□□ -0.32
VPS16-206ENST00000466415 SFMBT2Q5VUG0 894 aa13.08□□□□□ -0.32
VPS16-206ENST00000466415 RNF169Q8NCN4 708 aa13.08□□□□□ -0.32
VPS16-206ENST00000466415 SMG8Q8ND04 991 aaKnown RBP13.08□□□□□ -0.32
VPS16-206ENST00000466415 SEPT8Q92599 483 aa13.08□□□□□ -0.32
VPS16-206ENST00000466415 SEMA4DQ92854 862 aa13.08□□□□□ -0.32
VPS16-206ENST00000466415 APBB2Q92870 758 aa13.08□□□□□ -0.32
VPS16-206ENST00000466415 DNAJC7Q99615 494 aa13.08□□□□□ -0.32
VPS16-206ENST00000466415 TMX1Q9H3N1 280 aa13.08□□□□□ -0.32
VPS16-206ENST00000466415 UBE2TQ9NPD8 197 aaPredicted RBP13.08□□□□□ -0.32
VPS16-206ENST00000466415 KLK14Q9P0G3 267 aa13.08□□□□□ -0.32
VPS16-206ENST00000466415 CNTN3Q9P232 1028 aa13.08□□□□□ -0.32
VPS16-206ENST00000466415 MYO6Q9UM54 1294 aa13.08□□□□□ -0.32
VPS16-206ENST00000466415 MGEA5O60502 916 aa13.07□□□□□ -0.32
VPS16-206ENST00000466415 VNN1O95497 513 aa13.07□□□□□ -0.32
VPS16-206ENST00000466415 ITGB3P05106 788 aa13.07□□□□□ -0.32
VPS16-206ENST00000466415 STAT1P42224 750 aa13.07□□□□□ -0.32
VPS16-206ENST00000466415 MFAP3P55082 362 aa13.07□□□□□ -0.32
VPS16-206ENST00000466415 CCL23P55773 120 aa13.07□□□□□ -0.32
VPS16-206ENST00000466415 NOP14P78316 857 aaKnown RBP13.07□□□□□ -0.32
VPS16-206ENST00000466415 CCZ1BP86790 482 aa13.07□□□□□ -0.32
VPS16-206ENST00000466415 CCZ1P86791 482 aaPredicted RBP13.07□□□□□ -0.32
VPS16-206ENST00000466415 MBTPS1Q14703 1052 aa13.07□□□□□ -0.32
VPS16-206ENST00000466415 ARHGAP44Q17R89 818 aa13.07□□□□□ -0.32
VPS16-206ENST00000466415 LRRC26Q2I0M4 334 aa13.07□□□□□ -0.32
VPS16-206ENST00000466415 ZNF699Q32M78 642 aa13.07□□□□□ -0.32
VPS16-206ENST00000466415 TDRD12Q587J7 1177 aaKnown RBP13.07□□□□□ -0.32
VPS16-206ENST00000466415 GLRA4Q5JXX5 417 aa13.07□□□□□ -0.32
VPS16-206ENST00000466415 GJB7Q6PEY0 223 aa13.07□□□□□ -0.32
VPS16-206ENST00000466415 CYP26C1Q6V0L0 522 aa13.07□□□□□ -0.32
VPS16-206ENST00000466415 ARHGEF19Q8IW93 802 aa13.07□□□□□ -0.32
VPS16-206ENST00000466415 LMO3Q8TAP4 145 aa13.07□□□□□ -0.32
VPS16-206ENST00000466415 BAP1Q92560 729 aa13.07□□□□□ -0.32
VPS16-206ENST00000466415 TSPAN18Q96SJ8 248 aa13.07□□□□□ -0.32
VPS16-206ENST00000466415 PI4K2AQ9BTU6 479 aa13.07□□□□□ -0.32
VPS16-206ENST00000466415 TRAIPQ9BWF2 469 aa13.07□□□□□ -0.32
VPS16-206ENST00000466415 STK33Q9BYT3 514 aa13.07□□□□□ -0.32
VPS16-206ENST00000466415 OSBPL7Q9BZF2 842 aa13.07□□□□□ -0.32
VPS16-206ENST00000466415 PRDM5Q9NQX1 630 aaPredicted RBP13.07□□□□□ -0.32
VPS16-206ENST00000466415 DPP3Q9NY33 737 aa13.07□□□□□ -0.32
VPS16-206ENST00000466415 ITGA11Q9UKX5 1188 aa13.07□□□□□ -0.32
VPS16-206ENST00000466415 UBQLN1Q9UMX0 589 aaKnown RBP13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms