RNA–Protein interactions for RNA: ENST00000464577.1

USP48-206, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2

Gene USP48, Length 2,089 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-206ENST00000464577 CCDC24Q8N4L8 307 aa7.77□□□□□ -1.17
USP48-206ENST00000464577 ATL2Q8NHH9 583 aa7.77□□□□□ -1.17
USP48-206ENST00000464577 ZNF398Q8TD17 642 aa7.77□□□□□ -1.17
USP48-206ENST00000464577 SLC7A6OSQ96CW6 309 aaPredicted RBP7.77□□□□□ -1.17
USP48-206ENST00000464577 NUDCD1Q96RS6 583 aa7.77□□□□□ -1.17
USP48-206ENST00000464577 PPCSQ9HAB8 311 aa7.77□□□□□ -1.17
USP48-206ENST00000464577 SAR1AQ9NR31 198 aa7.77□□□□□ -1.17
USP48-206ENST00000464577 NYAP2Q9P242 653 aa7.77□□□□□ -1.17
USP48-206ENST00000464577 LNPEPQ9UIQ6 1025 aa7.77□□□□□ -1.17
USP48-206ENST00000464577 GGA1Q9UJY5 639 aa7.77□□□□□ -1.17
USP48-206ENST00000464577 PHTF1Q9UMS5 762 aa7.77□□□□□ -1.17
USP48-206ENST00000464577 ATRNL1Q5VV63 1379 aa7.77□□□□□ -1.17
USP48-206ENST00000464577 TAF1LQ8IZX4 1826 aa7.77□□□□□ -1.17
USP48-206ENST00000464577 IGLV3-22A0A075B6J6 115 aa7.77□□□□□ -1.17
USP48-206ENST00000464577 DPPA5A6NC42 116 aa7.77□□□□□ -1.17
USP48-206ENST00000464577 RASA4BC9J798 803 aa7.77□□□□□ -1.17
USP48-206ENST00000464577 PIK3CDO00329 1044 aa7.77□□□□□ -1.17
USP48-206ENST00000464577 RASA4O43374 803 aa7.77□□□□□ -1.17
USP48-206ENST00000464577 SLITRK3O94933 977 aa7.77□□□□□ -1.17
USP48-206ENST00000464577 HLA-DOAP06340 250 aa7.77□□□□□ -1.17
USP48-206ENST00000464577 MAPTP10636 758 aaKnown RBP7.77□□□□□ -1.17
USP48-206ENST00000464577 PECAM1P16284 738 aaPredicted RBP7.77□□□□□ -1.17
USP48-206ENST00000464577 GM2AP17900 193 aa7.77□□□□□ -1.17
USP48-206ENST00000464577 TARSP26639 723 aaKnown RBP7.77□□□□□ -1.17
USP48-206ENST00000464577 CNGA1P29973 690 aa7.77□□□□□ -1.17
USP48-206ENST00000464577 PCK1P35558 622 aa7.77□□□□□ -1.17
USP48-206ENST00000464577 SLC1A1P43005 524 aa7.77□□□□□ -1.17
USP48-206ENST00000464577 CDR2Q01850 454 aa7.77□□□□□ -1.17
USP48-206ENST00000464577 PPP3CAQ08209 521 aa7.77□□□□□ -1.17
USP48-206ENST00000464577 PTP4A2Q12974 167 aa7.77□□□□□ -1.17
USP48-206ENST00000464577 RASA3Q14644 834 aa7.77□□□□□ -1.17
USP48-206ENST00000464577 RASA2Q15283 850 aa7.77□□□□□ -1.17
USP48-206ENST00000464577 SLC45A4Q5BKX6 768 aa7.77□□□□□ -1.17
USP48-206ENST00000464577 ODR4Q5SWX8 454 aa7.77□□□□□ -1.17
USP48-206ENST00000464577 SYDE2Q5VT97 1194 aa7.77□□□□□ -1.17
USP48-206ENST00000464577 SLFN13Q68D06 897 aa7.77□□□□□ -1.17
USP48-206ENST00000464577 IRGCQ6NXR0 463 aa7.77□□□□□ -1.17
USP48-206ENST00000464577 OTOP1Q7RTM1 612 aa7.77□□□□□ -1.17
USP48-206ENST00000464577 SLC51AQ86UW1 340 aa7.77□□□□□ -1.17
USP48-206ENST00000464577 TRABD2AQ86V40 505 aa7.77□□□□□ -1.17
USP48-206ENST00000464577 LONP2Q86WA8 852 aa7.77□□□□□ -1.17
USP48-206ENST00000464577 FBXO11Q86XK2 927 aa7.77□□□□□ -1.17
USP48-206ENST00000464577 CPNE8Q86YQ8 564 aa7.77□□□□□ -1.17
USP48-206ENST00000464577 KSR1Q8IVT5 923 aa7.77□□□□□ -1.17
USP48-206ENST00000464577 CCDC89Q8N998 374 aa7.77□□□□□ -1.17
USP48-206ENST00000464577 ZFAND2BQ8WV99 257 aa7.77□□□□□ -1.17
USP48-206ENST00000464577 C10orf82Q8WW14 230 aa7.77□□□□□ -1.17
USP48-206ENST00000464577 SHC3Q92529 594 aa7.77□□□□□ -1.17
USP48-206ENST00000464577 DYDC2Q96IM9 177 aa7.77□□□□□ -1.17
USP48-206ENST00000464577 NACC1Q96RE7 527 aa7.77□□□□□ -1.17
USP48-206ENST00000464577 TBC1D10AQ9BXI6 508 aa7.77□□□□□ -1.17
USP48-206ENST00000464577 KIAA1683Q9H0B3 1180 aa7.77□□□□□ -1.17
USP48-206ENST00000464577 TMEM206Q9H813 350 aa7.77□□□□□ -1.17
USP48-206ENST00000464577 DDX4Q9NQI0 724 aaKnown RBP7.77□□□□□ -1.17
USP48-206ENST00000464577 CHST7Q9NS84 486 aa7.77□□□□□ -1.17
USP48-206ENST00000464577 ASB3Q9Y575 518 aa7.77□□□□□ -1.17
USP48-206ENST00000464577 LOXHD1Q8IVV2 1947 aa7.76□□□□□ -1.17
USP48-206ENST00000464577 ENO4A6NNW6 628 aa7.76□□□□□ -1.17
USP48-206ENST00000464577 FOXO6A8MYZ6 492 aa7.76□□□□□ -1.17
USP48-206ENST00000464577 MPHOSPH10O00566 681 aaKnown RBP7.76□□□□□ -1.17
USP48-206ENST00000464577 PSMD10O75832 226 aa7.76□□□□□ -1.17
USP48-206ENST00000464577 T-ENOLP0DO92 83 aa7.76□□□□□ -1.17
USP48-206ENST00000464577 PTPN4P29074 926 aa7.76□□□□□ -1.17
USP48-206ENST00000464577 ZNF76P36508 570 aa7.76□□□□□ -1.17
USP48-206ENST00000464577 ADCY8P40145 1251 aa7.76□□□□□ -1.17
USP48-206ENST00000464577 PRELPP51888 382 aa7.76□□□□□ -1.17
USP48-206ENST00000464577 SNRPFP62306 86 aaKnown RBP7.76□□□□□ -1.17
USP48-206ENST00000464577 ROR2Q01974 943 aaKnown RBP7.76□□□□□ -1.17
USP48-206ENST00000464577 KLC1Q07866 573 aa7.76□□□□□ -1.17
USP48-206ENST00000464577 SNX1Q13596 522 aa7.76□□□□□ -1.17
USP48-206ENST00000464577 TMED2Q15363 201 aa7.76□□□□□ -1.17
USP48-206ENST00000464577 C1orf220Q5T0J3 134 aa7.76□□□□□ -1.17
USP48-206ENST00000464577 CWF19L1Q69YN2 538 aaKnown RBP7.76□□□□□ -1.17
USP48-206ENST00000464577 TRIM68Q6AZZ1 485 aa7.76□□□□□ -1.17
USP48-206ENST00000464577 FAM47EQ6ZV65 393 aa7.76□□□□□ -1.17
USP48-206ENST00000464577 TPH2Q8IWU9 490 aa7.76□□□□□ -1.17
USP48-206ENST00000464577 SYCP3Q8IZU3 236 aa7.76□□□□□ -1.17
USP48-206ENST00000464577 ZCCHC9Q8N567 271 aaKnown RBP7.76□□□□□ -1.17
USP48-206ENST00000464577 CNBD1Q8NA66 436 aa7.76□□□□□ -1.17
USP48-206ENST00000464577 RBBP8NLQ8NC74 664 aaPredicted RBP7.76□□□□□ -1.17
USP48-206ENST00000464577 PARD3BQ8TEW8 1205 aa7.76□□□□□ -1.17
USP48-206ENST00000464577 DNAJC9Q8WXX5 260 aa7.76□□□□□ -1.17
USP48-206ENST00000464577 SLC5A5Q92911 643 aa7.76□□□□□ -1.17
USP48-206ENST00000464577 BTBD6Q96KE9 485 aa7.76□□□□□ -1.17
USP48-206ENST00000464577 CFAP57Q96MR6 1250 aa7.76□□□□□ -1.17
USP48-206ENST00000464577 TTC25Q96NG3 672 aa7.76□□□□□ -1.17
USP48-206ENST00000464577 TSC22D3Q99576 134 aa7.76□□□□□ -1.17
USP48-206ENST00000464577 DCLRE1BQ9H816 532 aa7.76□□□□□ -1.17
USP48-206ENST00000464577 SSU72Q9NP77 194 aaKnown RBP7.76□□□□□ -1.17
USP48-206ENST00000464577 CYLDQ9NQC7 956 aa7.76□□□□□ -1.17
USP48-206ENST00000464577 AVENQ9NQS1 362 aaPredicted RBP7.76□□□□□ -1.17
USP48-206ENST00000464577 LRRC4BQ9NT99 713 aa7.76□□□□□ -1.17
USP48-206ENST00000464577 ETAA1Q9NY74 926 aa7.76□□□□□ -1.17
USP48-206ENST00000464577 STOML1Q9UBI4 398 aa7.76□□□□□ -1.17
USP48-206ENST00000464577 HAO1Q9UJM8 370 aa7.76□□□□□ -1.17
USP48-206ENST00000464577 FARP1Q9Y4F1 1045 aaPredicted RBP7.76□□□□□ -1.17
USP48-206ENST00000464577 A0A1W2PRG0 241 aa7.75□□□□□ -1.17
USP48-206ENST00000464577 C2CD2LO14523 706 aa7.75□□□□□ -1.17
USP48-206ENST00000464577 KCNQ2O43526 872 aa7.75□□□□□ -1.17
USP48-206ENST00000464577 MARK3P27448 753 aa7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms