RNA–Protein interactions for RNA: ENST00000463477.5

PTPRD-207, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 1,697 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-207ENST00000463477 FAM178BQ8IXR5 827 aa10.7□□□□□ -0.7
PTPRD-207ENST00000463477 NME8Q8N427 588 aa10.7□□□□□ -0.7
PTPRD-207ENST00000463477 COG1Q8WTW3 980 aa10.7□□□□□ -0.7
PTPRD-207ENST00000463477 FAM167AQ96KS9 214 aa10.7□□□□□ -0.7
PTPRD-207ENST00000463477 MTIF3Q9H2K0 278 aaKnown RBP10.7□□□□□ -0.7
PTPRD-207ENST00000463477 ST6GALNAC4Q9H4F1 302 aa10.7□□□□□ -0.7
PTPRD-207ENST00000463477 COL1A2P08123 1366 aa10.7□□□□□ -0.7
PTPRD-207ENST00000463477 ZBTB42B2RXF5 422 aa10.69□□□□□ -0.7
PTPRD-207ENST00000463477 H3BQF6 201 aa10.69□□□□□ -0.7
PTPRD-207ENST00000463477 P4HBP07237 508 aaKnown RBP10.69□□□□□ -0.7
PTPRD-207ENST00000463477 ACTN1P12814 892 aa10.69□□□□□ -0.7
PTPRD-207ENST00000463477 NMT1P30419 496 aaKnown RBP10.69□□□□□ -0.7
PTPRD-207ENST00000463477 NPEPPSP55786 919 aa10.69□□□□□ -0.7
PTPRD-207ENST00000463477 IGBP1P78318 339 aa10.69□□□□□ -0.7
PTPRD-207ENST00000463477 SMAD3P84022 425 aaKnown RBP10.69□□□□□ -0.7
PTPRD-207ENST00000463477 MAPK7Q13164 816 aa10.69□□□□□ -0.7
PTPRD-207ENST00000463477 MBTPS1Q14703 1052 aa10.69□□□□□ -0.7
PTPRD-207ENST00000463477 CCDC181Q5TID7 509 aa10.69□□□□□ -0.7
PTPRD-207ENST00000463477 MTHFD1LQ6UB35 978 aa10.69□□□□□ -0.7
PTPRD-207ENST00000463477 RUFY4Q6ZNE9 571 aa10.69□□□□□ -0.7
PTPRD-207ENST00000463477 ZNF571Q7Z3V5 609 aaPredicted RBP10.69□□□□□ -0.7
PTPRD-207ENST00000463477 SLC17A8Q8NDX2 589 aa10.69□□□□□ -0.7
PTPRD-207ENST00000463477 AENQ8WTP8 325 aaKnown RBP10.69□□□□□ -0.7
PTPRD-207ENST00000463477 LXNQ9BS40 222 aa10.69□□□□□ -0.7
PTPRD-207ENST00000463477 PDE11AQ9HCR9 933 aa10.69□□□□□ -0.7
PTPRD-207ENST00000463477 AGPAT3Q9NRZ7 376 aa10.69□□□□□ -0.7
PTPRD-207ENST00000463477 GCNT4Q9P109 453 aa10.69□□□□□ -0.7
PTPRD-207ENST00000463477 ADAMTS1Q9UHI8 967 aa10.69□□□□□ -0.7
PTPRD-207ENST00000463477 NAGPAQ9UK23 515 aa10.69□□□□□ -0.7
PTPRD-207ENST00000463477 ARHGEF35A5YM69 484 aa10.69□□□□□ -0.7
PTPRD-207ENST00000463477 PMM2O15305 246 aa10.69□□□□□ -0.7
PTPRD-207ENST00000463477 P4HA2O15460 535 aa10.69□□□□□ -0.7
PTPRD-207ENST00000463477 MAGEB2O15479 319 aa10.69□□□□□ -0.7
PTPRD-207ENST00000463477 DKC1O60832 514 aaKnown RBP eCLIP10.69□□□□□ -0.7
PTPRD-207ENST00000463477 BAIAP3O94812 1187 aa10.69□□□□□ -0.7
PTPRD-207ENST00000463477 STBD1O95210 358 aa10.69□□□□□ -0.7
PTPRD-207ENST00000463477 OATP04181 439 aa10.69□□□□□ -0.7
PTPRD-207ENST00000463477 CCDC172P0C7W6 258 aa10.69□□□□□ -0.7
PTPRD-207ENST00000463477 FMO5P49326 533 aa10.69□□□□□ -0.7
PTPRD-207ENST00000463477 PSMC5P62195 406 aa10.69□□□□□ -0.7
PTPRD-207ENST00000463477 C2orf54Q08AI8 447 aa10.69□□□□□ -0.7
PTPRD-207ENST00000463477 KCNA1Q09470 495 aa10.69□□□□□ -0.7
PTPRD-207ENST00000463477 HSP90B2PQ58FF3 399 aa10.69□□□□□ -0.7
PTPRD-207ENST00000463477 XKR3Q5GH77 459 aa10.69□□□□□ -0.7
PTPRD-207ENST00000463477 DCAF17Q5H9S7 520 aaPredicted RBP10.69□□□□□ -0.7
PTPRD-207ENST00000463477 IER5Q5VY09 327 aa10.69□□□□□ -0.7
PTPRD-207ENST00000463477 TET1Q8NFU7 2136 aa10.69□□□□□ -0.7
PTPRD-207ENST00000463477 TRAPPC12Q8WVT3 735 aa10.69□□□□□ -0.7
PTPRD-207ENST00000463477 DNAJB3Q8WWF6 145 aa10.69□□□□□ -0.7
PTPRD-207ENST00000463477 LRCH3Q96II8 777 aa10.69□□□□□ -0.7
PTPRD-207ENST00000463477 NIFKQ9BYG3 293 aaKnown RBP10.69□□□□□ -0.7
PTPRD-207ENST00000463477 STK33Q9BYT3 514 aa10.69□□□□□ -0.7
PTPRD-207ENST00000463477 TMEM206Q9H813 350 aa10.69□□□□□ -0.7
PTPRD-207ENST00000463477 CXXC1Q9P0U4 656 aaPredicted RBP10.69□□□□□ -0.7
PTPRD-207ENST00000463477 LARSQ9P2J5 1176 aaKnown RBP10.69□□□□□ -0.7
PTPRD-207ENST00000463477 WRAP73Q9P2S5 460 aaPredicted RBP10.69□□□□□ -0.7
PTPRD-207ENST00000463477 HPCAL4Q9UM19 191 aa10.69□□□□□ -0.7
PTPRD-207ENST00000463477 USP20Q9Y2K6 914 aa10.69□□□□□ -0.7
PTPRD-207ENST00000463477 FRMD4BQ9Y2L6 1034 aa10.69□□□□□ -0.7
PTPRD-207ENST00000463477 ABHD14A-ACY1A0A1B0GW23 586 aa10.68□□□□□ -0.7
PTPRD-207ENST00000463477 CCDC66A2RUB6 948 aa10.68□□□□□ -0.7
PTPRD-207ENST00000463477 LRRIQ3A6PVS8 624 aaPredicted RBP10.68□□□□□ -0.7
PTPRD-207ENST00000463477 CLIC2O15247 247 aa10.68□□□□□ -0.7
PTPRD-207ENST00000463477 POLR3GO15318 223 aaPredicted RBP10.68□□□□□ -0.7
PTPRD-207ENST00000463477 BUB1O43683 1085 aa10.68□□□□□ -0.7
PTPRD-207ENST00000463477 N4BP1O75113 896 aaKnown RBP10.68□□□□□ -0.7
PTPRD-207ENST00000463477 PALMO75781 387 aa10.68□□□□□ -0.7
PTPRD-207ENST00000463477 CHRNA1P02708 482 aa10.68□□□□□ -0.7
PTPRD-207ENST00000463477 STAT1P42224 750 aa10.68□□□□□ -0.7
PTPRD-207ENST00000463477 QARSP47897 775 aaKnown RBP10.68□□□□□ -0.7
PTPRD-207ENST00000463477 PRKCEQ02156 737 aa10.68□□□□□ -0.7
PTPRD-207ENST00000463477 APBA1Q02410 837 aa10.68□□□□□ -0.7
PTPRD-207ENST00000463477 MGAT3Q09327 533 aa10.68□□□□□ -0.7
PTPRD-207ENST00000463477 NNTQ13423 1086 aa10.68□□□□□ -0.7
PTPRD-207ENST00000463477 TARBP2Q15633 366 aaKnown RBP10.68□□□□□ -0.7
PTPRD-207ENST00000463477 UGCGQ16739 394 aa10.68□□□□□ -0.7
PTPRD-207ENST00000463477 ODR4Q5SWX8 454 aa10.68□□□□□ -0.7
PTPRD-207ENST00000463477 TAF3Q5VWG9 929 aa10.68□□□□□ -0.7
PTPRD-207ENST00000463477 TCERG1LQ5VWI1 586 aa10.68□□□□□ -0.7
PTPRD-207ENST00000463477 ALKBH5Q6P6C2 394 aaKnown RBP10.68□□□□□ -0.7
PTPRD-207ENST00000463477 CNKSR3Q6P9H4 555 aa10.68□□□□□ -0.7
PTPRD-207ENST00000463477 EMBQ6PCB8 327 aa10.68□□□□□ -0.7
PTPRD-207ENST00000463477 PADI6Q6TGC4 694 aa10.68□□□□□ -0.7
PTPRD-207ENST00000463477 SLFN11Q7Z7L1 901 aa10.68□□□□□ -0.7
PTPRD-207ENST00000463477 KIAA0319LQ8IZA0 1049 aa10.68□□□□□ -0.7
PTPRD-207ENST00000463477 DAW1Q8N136 415 aa10.68□□□□□ -0.7
PTPRD-207ENST00000463477 EIF1ADQ8N9N8 165 aaKnown RBP10.68□□□□□ -0.7
PTPRD-207ENST00000463477 PHOSPHO2Q8TCD6 241 aa10.68□□□□□ -0.7
PTPRD-207ENST00000463477 PBKQ96KB5 322 aa10.68□□□□□ -0.7
PTPRD-207ENST00000463477 CALR3Q96L12 384 aaKnown RBP10.68□□□□□ -0.7
PTPRD-207ENST00000463477 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP10.68□□□□□ -0.7
PTPRD-207ENST00000463477 SUGCTQ9HAC7 445 aa10.68□□□□□ -0.7
PTPRD-207ENST00000463477 STIM2Q9P246 746 aa10.68□□□□□ -0.7
PTPRD-207ENST00000463477 ADAM21Q9UKJ8 722 aa10.68□□□□□ -0.7
PTPRD-207ENST00000463477 SLC4A7Q9Y6M7 1214 aa10.68□□□□□ -0.7
PTPRD-207ENST00000463477 SQORQ9Y6N5 450 aa10.68□□□□□ -0.7
PTPRD-207ENST00000463477 MYH9P35579 1960 aaKnown RBP10.68□□□□□ -0.7
PTPRD-207ENST00000463477 SFI1A8K8P3 1242 aa10.67□□□□□ -0.7
PTPRD-207ENST00000463477 EFCAB14O75071 495 aa10.67□□□□□ -0.7
PTPRD-207ENST00000463477 HIP1RO75146 1068 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms