RNA–Protein interactions for RNA: ENST00000462494.5

ACTB-207, Transcript of actin beta, humanhuman

TSL 5

Gene ACTB, Length 2,245 nt, Biotype retained intron, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-207ENST00000462494 LRRC19Q9H756 370 aa18.1■□□□□ 0.49
ACTB-207ENST00000462494 SLC9A2Q9UBY0 812 aa18.1■□□□□ 0.49
ACTB-207ENST00000462494 FZD1Q9UP38 647 aa18.1■□□□□ 0.49
ACTB-207ENST00000462494 DKC1O60832 514 aaKnown RBP eCLIP18.1■□□□□ 0.49
ACTB-207ENST00000462494 UNGP13051 313 aaPredicted RBP18.1■□□□□ 0.49
ACTB-207ENST00000462494 RARGP13631 454 aa18.1■□□□□ 0.49
ACTB-207ENST00000462494 SSTR3P32745 418 aaPredicted RBP18.1■□□□□ 0.49
ACTB-207ENST00000462494 ACOT2P49753 483 aa18.1■□□□□ 0.49
ACTB-207ENST00000462494 BACE1P56817 501 aa18.1■□□□□ 0.49
ACTB-207ENST00000462494 ADCY2Q08462 1091 aa18.1■□□□□ 0.49
ACTB-207ENST00000462494 TRIP13Q15645 432 aaPredicted RBP18.1■□□□□ 0.49
ACTB-207ENST00000462494 DAB2IPQ5VWQ8 1189 aa18.1■□□□□ 0.49
ACTB-207ENST00000462494 SPOPLQ6IQ16 392 aa18.1■□□□□ 0.49
ACTB-207ENST00000462494 C6orf89Q6UWU4 347 aa18.1■□□□□ 0.49
ACTB-207ENST00000462494 C3orf20Q8ND61 904 aa18.1■□□□□ 0.49
ACTB-207ENST00000462494 ASIC3Q9UHC3 531 aa18.1■□□□□ 0.49
ACTB-207ENST00000462494 CNOT7Q9UIV1 285 aaKnown RBP18.1■□□□□ 0.49
ACTB-207ENST00000462494 GGA2Q9UJY4 613 aa18.1■□□□□ 0.49
ACTB-207ENST00000462494 MROH7Q68CQ1 1323 aa18.09■□□□□ 0.49
ACTB-207ENST00000462494 MAFGO15525 162 aa18.09■□□□□ 0.49
ACTB-207ENST00000462494 PIK3CAP42336 1068 aa18.09■□□□□ 0.49
ACTB-207ENST00000462494 ACTR2P61160 394 aa18.09■□□□□ 0.49
ACTB-207ENST00000462494 ERMARDQ5T6L9 678 aa18.09■□□□□ 0.49
ACTB-207ENST00000462494 CHADLQ6NUI6 762 aa18.09■□□□□ 0.49
ACTB-207ENST00000462494 CACNA2D3Q8IZS8 1091 aa18.09■□□□□ 0.49
ACTB-207ENST00000462494 C12orf50Q8NA57 414 aaPredicted RBP18.09■□□□□ 0.49
ACTB-207ENST00000462494 CHST7Q9NS84 486 aa18.09■□□□□ 0.49
ACTB-207ENST00000462494 FSCN2O14926 492 aa18.08■□□□□ 0.49
ACTB-207ENST00000462494 EXTL3O43909 919 aa18.08■□□□□ 0.49
ACTB-207ENST00000462494 FSBPO95073 299 aa18.08■□□□□ 0.49
ACTB-207ENST00000462494 NSFP46459 744 aaKnown RBP18.08■□□□□ 0.49
ACTB-207ENST00000462494 HMGCS2P54868 508 aa18.08■□□□□ 0.49
ACTB-207ENST00000462494 SF3A3Q12874 501 aaKnown RBP eCLIP18.08■□□□□ 0.495e-7■■■■□ 22.6
ACTB-207ENST00000462494 GKAP1Q5VSY0 366 aaPredicted RBP18.08■□□□□ 0.49
ACTB-207ENST00000462494 PASD1Q8IV76 773 aa18.08■□□□□ 0.49
ACTB-207ENST00000462494 TMEM143Q96AN5 459 aa18.08■□□□□ 0.49
ACTB-207ENST00000462494 CHMP6Q96FZ7 201 aa18.08■□□□□ 0.49
ACTB-207ENST00000462494 EFCC1Q9HA90 598 aa18.08■□□□□ 0.49
ACTB-207ENST00000462494 PDLIM7Q9NR12 457 aa18.08■□□□□ 0.49
ACTB-207ENST00000462494 HACL1Q9UJ83 578 aa18.08■□□□□ 0.49
ACTB-207ENST00000462494 PCDHB2Q9Y5E7 798 aa18.08■□□□□ 0.49
ACTB-207ENST00000462494 DOCK5Q9H7D0 1870 aa18.08■□□□□ 0.48
ACTB-207ENST00000462494 GOLGA6L7A0A1B0GV03 622 aa18.08■□□□□ 0.48
ACTB-207ENST00000462494 RASGRF2O14827 1237 aa18.08■□□□□ 0.48
ACTB-207ENST00000462494 ZC3H11AO75152 810 aaKnown RBP eCLIP18.08■□□□□ 0.48
ACTB-207ENST00000462494 HLA-DRAP01903 254 aa18.08■□□□□ 0.48
ACTB-207ENST00000462494 FDX1P10109 184 aa18.08■□□□□ 0.48
ACTB-207ENST00000462494 MMP13P45452 471 aa18.08■□□□□ 0.48
ACTB-207ENST00000462494 POLGP54098 1239 aaPredicted RBP18.08■□□□□ 0.48
ACTB-207ENST00000462494 WNT7BP56706 349 aa18.08■□□□□ 0.48
ACTB-207ENST00000462494 NLRP11P59045 1033 aaKnown RBP18.08■□□□□ 0.48
ACTB-207ENST00000462494 CCDC38Q502W7 563 aa18.08■□□□□ 0.48
ACTB-207ENST00000462494 PRAMEF18Q5VWM3 479 aa18.08■□□□□ 0.48
ACTB-207ENST00000462494 CCDC50Q8IVM0 306 aa18.08■□□□□ 0.48
ACTB-207ENST00000462494 DDX23Q9BUQ8 820 aaKnown RBP18.08■□□□□ 0.48
ACTB-207ENST00000462494 FAM129AQ9BZQ8 928 aa18.08■□□□□ 0.48
ACTB-207ENST00000462494 GINM1Q9NU53 330 aa18.08■□□□□ 0.48
ACTB-207ENST00000462494 ARHGAP28Q9P2N2 729 aa18.08■□□□□ 0.48
ACTB-207ENST00000462494 KIAA1217Q5T5P2 1943 aa18.08■□□□□ 0.48
ACTB-207ENST00000462494 MYPNQ86TC9 1320 aa18.08■□□□□ 0.48
ACTB-207ENST00000462494 ACSL3O95573 720 aa18.07■□□□□ 0.48
ACTB-207ENST00000462494 AGTP01019 485 aa18.07■□□□□ 0.48
ACTB-207ENST00000462494 DRD4P21917 467 aa18.07■□□□□ 0.48
ACTB-207ENST00000462494 STRN3Q13033 797 aa18.07■□□□□ 0.48
ACTB-207ENST00000462494 TDRD10Q5VZ19 366 aaKnown RBP18.07■□□□□ 0.48
ACTB-207ENST00000462494 CCDC114Q96M63 670 aa18.07■□□□□ 0.48
ACTB-207ENST00000462494 HEMGNQ9BXL5 484 aa18.07■□□□□ 0.48
ACTB-207ENST00000462494 DNAJC17Q9NVM6 304 aaKnown RBP18.07■□□□□ 0.48
ACTB-207ENST00000462494 C15orf39Q6ZRI6 1047 aa18.07■□□□□ 0.48
ACTB-207ENST00000462494 MMS22LQ6ZRQ5 1243 aa18.07■□□□□ 0.48
ACTB-207ENST00000462494 ZNF280CQ8ND82 737 aa18.07■□□□□ 0.48
ACTB-207ENST00000462494 CENPTQ96BT3 561 aa18.07■□□□□ 0.48
ACTB-207ENST00000462494 HERPUD2Q9BSE4 406 aa18.07■□□□□ 0.48
ACTB-207ENST00000462494 ADAM7Q9H2U9 754 aa18.07■□□□□ 0.48
ACTB-207ENST00000462494 CDC42EP4Q9H3Q1 356 aaKnown RBP18.07■□□□□ 0.48
ACTB-207ENST00000462494 PICK1Q9NRD5 415 aa18.07■□□□□ 0.48
ACTB-207ENST00000462494 AGO2Q9UKV8 859 aaKnown RBP18.07■□□□□ 0.48
ACTB-207ENST00000462494 SBDSQ9Y3A5 250 aaKnown RBP eCLIP18.07■□□□□ 0.48
ACTB-207ENST00000462494 WDR81Q562E7 1941 aa18.07■□□□□ 0.48
ACTB-207ENST00000462494 C5orf60A6NFR6 353 aa18.06■□□□□ 0.48
ACTB-207ENST00000462494 ATP2C2O75185 946 aa18.06■□□□□ 0.48
ACTB-207ENST00000462494 CFHP08603 1231 aa18.06■□□□□ 0.48
ACTB-207ENST00000462494 HNRNPH1P31943 449 aaKnown RBP18.06■□□□□ 0.48
ACTB-207ENST00000462494 GJC1P36383 396 aa18.06■□□□□ 0.48
ACTB-207ENST00000462494 SSR1P43307 286 aaKnown RBP18.06■□□□□ 0.48
ACTB-207ENST00000462494 VPS41P49754 854 aa18.06■□□□□ 0.48
ACTB-207ENST00000462494 RTP1P59025 263 aa18.06■□□□□ 0.48
ACTB-207ENST00000462494 ACTN3Q08043 901 aaPredicted RBP18.06■□□□□ 0.48
ACTB-207ENST00000462494 TMEM132BQ14DG7 1078 aa18.06■□□□□ 0.48
ACTB-207ENST00000462494 EMC2Q15006 297 aa18.06■□□□□ 0.48
ACTB-207ENST00000462494 LONRF1Q17RB8 773 aa18.06■□□□□ 0.48
ACTB-207ENST00000462494 MIS18BP1Q6P0N0 1132 aa18.06■□□□□ 0.48
ACTB-207ENST00000462494 ABHD15Q6UXT9 468 aa18.06■□□□□ 0.48
ACTB-207ENST00000462494 ARMC9Q7Z3E5 817 aa18.06■□□□□ 0.48
ACTB-207ENST00000462494 MICALL2Q8IY33 904 aa18.06■□□□□ 0.48
ACTB-207ENST00000462494 CNPY4Q8N129 248 aa18.06■□□□□ 0.48
ACTB-207ENST00000462494 ZBTB45Q96K62 511 aaPredicted RBP18.06■□□□□ 0.48
ACTB-207ENST00000462494 WRNIP1Q96S55 665 aa18.06■□□□□ 0.48
ACTB-207ENST00000462494 C11orf70Q9BRQ4 267 aa18.06■□□□□ 0.48
ACTB-207ENST00000462494 INTS9Q9NV88 658 aaKnown RBP18.06■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms