RNA–Protein interactions for RNA: ENST00000461855.3

SPTAN1-204, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

TSL 2

Gene SPTAN1, Length 857 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-204ENST00000461855 SMRP1Q8NCR6 262 aa11.09□□□□□ -0.63
SPTAN1-204ENST00000461855 ZNF507Q8TCN5 953 aa11.09□□□□□ -0.63
SPTAN1-204ENST00000461855 AUTS2Q8WXX7 1259 aa11.09□□□□□ -0.63
SPTAN1-204ENST00000461855 DDX27Q96GQ7 796 aaKnown RBP11.09□□□□□ -0.63
SPTAN1-204ENST00000461855 KLHL5Q96PQ7 755 aa11.09□□□□□ -0.63
SPTAN1-204ENST00000461855 ACCSQ96QU6 501 aa11.09□□□□□ -0.63
SPTAN1-204ENST00000461855 S1PR5Q9H228 398 aa11.09□□□□□ -0.63
SPTAN1-204ENST00000461855 IKZF4Q9H2S9 585 aa11.09□□□□□ -0.63
SPTAN1-204ENST00000461855 SLC38A7Q9NVC3 462 aa11.09□□□□□ -0.63
SPTAN1-204ENST00000461855 ANKFY1Q9P2R3 1169 aa11.09□□□□□ -0.63
SPTAN1-204ENST00000461855 CACNG4Q9UBN1 327 aa11.09□□□□□ -0.63
SPTAN1-204ENST00000461855 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.09□□□□□ -0.63
SPTAN1-204ENST00000461855 HCFC2Q9Y5Z7 792 aa11.09□□□□□ -0.63
SPTAN1-204ENST00000461855 A0A1B0GVL5 298 aa11.08□□□□□ -0.64
SPTAN1-204ENST00000461855 TISP43B9A030 160 aa11.08□□□□□ -0.64
SPTAN1-204ENST00000461855 EIF3DO15371 548 aaKnown RBP eCLIP11.08□□□□□ -0.64
SPTAN1-204ENST00000461855 MBTPS2O43462 519 aa11.08□□□□□ -0.64
SPTAN1-204ENST00000461855 KLRC4O43908 158 aa11.08□□□□□ -0.64
SPTAN1-204ENST00000461855 TADA2AO75478 443 aa11.08□□□□□ -0.64
SPTAN1-204ENST00000461855 CSPG5O95196 566 aa11.08□□□□□ -0.64
SPTAN1-204ENST00000461855 KIF4AO95239 1232 aa11.08□□□□□ -0.64
SPTAN1-204ENST00000461855 CXCL8P10145 99 aa11.08□□□□□ -0.64
SPTAN1-204ENST00000461855 CYP3A5P20815 502 aa11.08□□□□□ -0.64
SPTAN1-204ENST00000461855 GARTP22102 1010 aa11.08□□□□□ -0.64
SPTAN1-204ENST00000461855 FGFR3P22607 806 aa11.08□□□□□ -0.64
SPTAN1-204ENST00000461855 LRPAP1P30533 357 aa11.08□□□□□ -0.64
SPTAN1-204ENST00000461855 TNFSF9P41273 254 aa11.08□□□□□ -0.64
SPTAN1-204ENST00000461855 GLUD2P49448 558 aa11.08□□□□□ -0.64
SPTAN1-204ENST00000461855 CLCNKBP51801 687 aa11.08□□□□□ -0.64
SPTAN1-204ENST00000461855 RBM10P98175 930 aaKnown RBP11.08□□□□□ -0.64
SPTAN1-204ENST00000461855 ELAVL2Q12926 359 aaKnown RBP11.08□□□□□ -0.64
SPTAN1-204ENST00000461855 SMAD4Q13485 552 aaKnown RBP11.08□□□□□ -0.64
SPTAN1-204ENST00000461855 POSTNQ15063 836 aa11.08□□□□□ -0.64
SPTAN1-204ENST00000461855 SMAD2Q15796 467 aaKnown RBP11.08□□□□□ -0.64
SPTAN1-204ENST00000461855 ENOX2Q16206 610 aaKnown RBP11.08□□□□□ -0.64
SPTAN1-204ENST00000461855 USP41Q3LFD5 358 aa11.08□□□□□ -0.64
SPTAN1-204ENST00000461855 PTCRAQ6ISU1 281 aaPredicted RBP11.08□□□□□ -0.64
SPTAN1-204ENST00000461855 ANKRD54Q6NXT1 300 aa11.08□□□□□ -0.64
SPTAN1-204ENST00000461855 PPFIBP1Q86W92 1011 aa11.08□□□□□ -0.64
SPTAN1-204ENST00000461855 C3orf58Q8NDZ4 430 aa11.08□□□□□ -0.64
SPTAN1-204ENST00000461855 GLIS3Q8NEA6 775 aa11.08□□□□□ -0.64
SPTAN1-204ENST00000461855 ADAMTS19Q8TE59 1207 aa11.08□□□□□ -0.64
SPTAN1-204ENST00000461855 SUSD6Q92537 303 aa11.08□□□□□ -0.64
SPTAN1-204ENST00000461855 RABGGTAQ92696 567 aa11.08□□□□□ -0.64
SPTAN1-204ENST00000461855 CASP10Q92851 521 aa11.08□□□□□ -0.64
SPTAN1-204ENST00000461855 BICD1Q96G01 975 aa11.08□□□□□ -0.64
SPTAN1-204ENST00000461855 PAGE5Q96GU1 130 aa11.08□□□□□ -0.64
SPTAN1-204ENST00000461855 MSTO1Q9BUK6 570 aa11.08□□□□□ -0.64
SPTAN1-204ENST00000461855 ASB7Q9H672 318 aa11.08□□□□□ -0.64
SPTAN1-204ENST00000461855 TMEM206Q9H813 350 aa11.08□□□□□ -0.64
SPTAN1-204ENST00000461855 MRPL17Q9NRX2 175 aaKnown RBP11.08□□□□□ -0.64
SPTAN1-204ENST00000461855 TBC1D7Q9P0N9 293 aa11.08□□□□□ -0.64
SPTAN1-204ENST00000461855 FNIP2Q9P278 1114 aa11.08□□□□□ -0.64
SPTAN1-204ENST00000461855 SERTAD1Q9UHV2 236 aa11.08□□□□□ -0.64
SPTAN1-204ENST00000461855 CD207Q9UJ71 328 aa11.08□□□□□ -0.64
SPTAN1-204ENST00000461855 CIZ1Q9ULV3 898 aaPredicted RBP11.08□□□□□ -0.64
SPTAN1-204ENST00000461855 BARX2Q9UMQ3 279 aaPredicted RBP11.08□□□□□ -0.64
SPTAN1-204ENST00000461855 EXOC7Q9UPT5 735 aa11.08□□□□□ -0.64
SPTAN1-204ENST00000461855 DERAQ9Y315 318 aa11.08□□□□□ -0.64
SPTAN1-204ENST00000461855 SF3B1O75533 1304 aaKnown RBP eCLIP11.08□□□□□ -0.64
SPTAN1-204ENST00000461855 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11.07□□□□□ -0.64
SPTAN1-204ENST00000461855 LACTBL1A8MY62 500 aa11.07□□□□□ -0.64
SPTAN1-204ENST00000461855 B3GAT3O94766 335 aa11.07□□□□□ -0.64
SPTAN1-204ENST00000461855 GCNT3O95395 438 aa11.07□□□□□ -0.64
SPTAN1-204ENST00000461855 URODP06132 367 aa11.07□□□□□ -0.64
SPTAN1-204ENST00000461855 HARSP12081 509 aaKnown RBP11.07□□□□□ -0.64
SPTAN1-204ENST00000461855 IL9P15248 144 aa11.07□□□□□ -0.64
SPTAN1-204ENST00000461855 HOXB8P17481 243 aaPredicted RBP11.07□□□□□ -0.64
SPTAN1-204ENST00000461855 NDUFV1P49821 464 aa11.07□□□□□ -0.64
SPTAN1-204ENST00000461855 CLCN4P51793 760 aa11.07□□□□□ -0.64
SPTAN1-204ENST00000461855 NDUFA8P51970 172 aa11.07□□□□□ -0.64
SPTAN1-204ENST00000461855 ASIC1P78348 528 aa11.07□□□□□ -0.64
SPTAN1-204ENST00000461855 CUL4BQ13620 913 aa11.07□□□□□ -0.64
SPTAN1-204ENST00000461855 BMT2Q1RMZ1 405 aa11.07□□□□□ -0.64
SPTAN1-204ENST00000461855 RTP2Q5QGT7 225 aa11.07□□□□□ -0.64
SPTAN1-204ENST00000461855 LILRA6Q6PI73 481 aa11.07□□□□□ -0.64
SPTAN1-204ENST00000461855 LNX1Q8TBB1 728 aaPredicted RBP11.07□□□□□ -0.64
SPTAN1-204ENST00000461855 TMEM174Q8WUU8 243 aa11.07□□□□□ -0.64
SPTAN1-204ENST00000461855 PIK3R5Q8WYR1 880 aa11.07□□□□□ -0.64
SPTAN1-204ENST00000461855 HPS3Q969F9 1004 aa11.07□□□□□ -0.64
SPTAN1-204ENST00000461855 EMILIN2Q9BXX0 1053 aa11.07□□□□□ -0.64
SPTAN1-204ENST00000461855 GOLPH3LQ9H4A5 285 aa11.07□□□□□ -0.64
SPTAN1-204ENST00000461855 GOLGA2P5Q9HBQ8 144 aa11.07□□□□□ -0.64
SPTAN1-204ENST00000461855 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP11.07□□□□□ -0.64
SPTAN1-204ENST00000461855 PRKAG3Q9UGI9 489 aa11.07□□□□□ -0.64
SPTAN1-204ENST00000461855 AGO2Q9UKV8 859 aaKnown RBP11.07□□□□□ -0.64
SPTAN1-204ENST00000461855 NCOR1O75376 2440 aa11.07□□□□□ -0.64
SPTAN1-204ENST00000461855 TRIP11Q15643 1979 aa11.07□□□□□ -0.64
SPTAN1-204ENST00000461855 CUL9Q8IWT3 2517 aa11.06□□□□□ -0.64
SPTAN1-204ENST00000461855 TCHHQ07283 1943 aa11.06□□□□□ -0.64
SPTAN1-204ENST00000461855 C19orf67A6NJJ6 358 aa11.06□□□□□ -0.64
SPTAN1-204ENST00000461855 DLL1O00548 723 aa11.06□□□□□ -0.64
SPTAN1-204ENST00000461855 PODXLO00592 558 aa11.06□□□□□ -0.64
SPTAN1-204ENST00000461855 KIAA0391O15091 583 aaKnown RBP11.06□□□□□ -0.64
SPTAN1-204ENST00000461855 TEX28O15482 410 aa11.06□□□□□ -0.64
SPTAN1-204ENST00000461855 PRPF6O94906 941 aaKnown RBP11.06□□□□□ -0.64
SPTAN1-204ENST00000461855 CASP1P29466 404 aa11.06□□□□□ -0.64
SPTAN1-204ENST00000461855 SYKP43405 635 aa11.06□□□□□ -0.64
SPTAN1-204ENST00000461855 AARSP49588 968 aaKnown RBP eCLIP11.06□□□□□ -0.64
SPTAN1-204ENST00000461855 SNRPFP62306 86 aaKnown RBP11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms