RNA–Protein interactions for RNA: ENST00000461113.5

HDAC4-207, Transcript of histone deacetylase 4, humanhuman

TSL 1 (best)

Gene HDAC4, Length 1,019 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-207ENST00000461113 ACSF2Q96CM8 615 aaPredicted RBP13.72□□□□□ -0.21
HDAC4-207ENST00000461113 PAGE5Q96GU1 130 aa13.72□□□□□ -0.21
HDAC4-207ENST00000461113 TCHPQ9BT92 498 aa13.72□□□□□ -0.21
HDAC4-207ENST00000461113 KIFC3Q9BVG8 833 aa13.72□□□□□ -0.21
HDAC4-207ENST00000461113 TRIM9Q9C026 710 aa13.72□□□□□ -0.21
HDAC4-207ENST00000461113 ELAC1Q9H777 363 aaKnown RBP13.72□□□□□ -0.21
HDAC4-207ENST00000461113 KCNK12Q9HB15 430 aa13.72□□□□□ -0.21
HDAC4-207ENST00000461113 TMEM161AQ9NX61 479 aa13.72□□□□□ -0.21
HDAC4-207ENST00000461113 ARHGAP28Q9P2N2 729 aa13.72□□□□□ -0.21
HDAC4-207ENST00000461113 EVPLQ92817 2033 aa13.72□□□□□ -0.21
HDAC4-207ENST00000461113 SPTBN2O15020 2390 aa13.71□□□□□ -0.21
HDAC4-207ENST00000461113 WDR81Q562E7 1941 aa13.71□□□□□ -0.21
HDAC4-207ENST00000461113 A0A0U1RQF3 1178 aa13.71□□□□□ -0.21
HDAC4-207ENST00000461113 PVALEFA0A1B0GWK0 134 aa13.71□□□□□ -0.21
HDAC4-207ENST00000461113 DCDC2BA2VCK2 349 aa13.71□□□□□ -0.21
HDAC4-207ENST00000461113 KRBA1A5PL33 1030 aa13.71□□□□□ -0.21
HDAC4-207ENST00000461113 C9IYK1 514 aa13.71□□□□□ -0.21
HDAC4-207ENST00000461113 CFHP08603 1231 aa13.71□□□□□ -0.21
HDAC4-207ENST00000461113 ARF4P18085 180 aaPredicted RBP13.71□□□□□ -0.21
HDAC4-207ENST00000461113 NCKAP1LP55160 1127 aa13.71□□□□□ -0.21
HDAC4-207ENST00000461113 DCAF4L1Q3SXM0 396 aa13.71□□□□□ -0.21
HDAC4-207ENST00000461113 CNNM4Q6P4Q7 775 aa13.71□□□□□ -0.21
HDAC4-207ENST00000461113 KRBA2Q6ZNG9 492 aa13.71□□□□□ -0.21
HDAC4-207ENST00000461113 UNC13DQ70J99 1090 aa13.71□□□□□ -0.21
HDAC4-207ENST00000461113 SFR1Q86XK3 245 aa13.71□□□□□ -0.21
HDAC4-207ENST00000461113 ECHDC2Q86YB7 292 aa13.71□□□□□ -0.21
HDAC4-207ENST00000461113 TMEM161BQ8NDZ6 487 aa13.71□□□□□ -0.21
HDAC4-207ENST00000461113 RSPH1Q8WYR4 309 aa13.71□□□□□ -0.21
HDAC4-207ENST00000461113 HVCN1Q96D96 273 aa13.71□□□□□ -0.21
HDAC4-207ENST00000461113 CPB2Q96IY4 423 aa13.71□□□□□ -0.21
HDAC4-207ENST00000461113 ZNF558Q96NG5 402 aa13.71□□□□□ -0.21
HDAC4-207ENST00000461113 TRAIPQ9BWF2 469 aa13.71□□□□□ -0.21
HDAC4-207ENST00000461113 UBN1Q9NPG3 1134 aa13.71□□□□□ -0.21
HDAC4-207ENST00000461113 FAM105AQ9NUU6 356 aa13.71□□□□□ -0.21
HDAC4-207ENST00000461113 EXOC1Q9NV70 894 aa13.71□□□□□ -0.21
HDAC4-207ENST00000461113 DZANK1Q9NVP4 752 aa13.71□□□□□ -0.21
HDAC4-207ENST00000461113 OTOGLQ3ZCN5 2332 aa13.71□□□□□ -0.21
HDAC4-207ENST00000461113 CNTNAP2Q9UHC6 1331 aa13.7□□□□□ -0.22
HDAC4-207ENST00000461113 MYO10Q9HD67 2058 aa13.7□□□□□ -0.22
HDAC4-207ENST00000461113 A0A1B0GUA9 196 aa13.7□□□□□ -0.22
HDAC4-207ENST00000461113 ACTN4O43707 911 aaKnown RBP13.7□□□□□ -0.22
HDAC4-207ENST00000461113 SMC2O95347 1197 aa13.7□□□□□ -0.22
HDAC4-207ENST00000461113 GCNT3O95395 438 aa13.7□□□□□ -0.22
HDAC4-207ENST00000461113 DCNP07585 359 aaKnown RBP13.7□□□□□ -0.22
HDAC4-207ENST00000461113 EPCAMP16422 314 aa13.7□□□□□ -0.22
HDAC4-207ENST00000461113 LIG4P49917 911 aa13.7□□□□□ -0.22
HDAC4-207ENST00000461113 FAM189BP81408 668 aa13.7□□□□□ -0.22
HDAC4-207ENST00000461113 ATF7IP2Q5U623 682 aa13.7□□□□□ -0.22
HDAC4-207ENST00000461113 SLC27A1Q6PCB7 646 aa13.7□□□□□ -0.22
HDAC4-207ENST00000461113 TMC5Q6UXY8 1006 aa13.7□□□□□ -0.22
HDAC4-207ENST00000461113 CLEC17AQ6ZS10 378 aa13.7□□□□□ -0.22
HDAC4-207ENST00000461113 LRRC55Q6ZSA7 311 aa13.7□□□□□ -0.22
HDAC4-207ENST00000461113 OTOP3Q7RTS5 596 aa13.7□□□□□ -0.22
HDAC4-207ENST00000461113 SYCP3Q8IZU3 236 aa13.7□□□□□ -0.22
HDAC4-207ENST00000461113 DNAJC19Q96DA6 116 aa13.7□□□□□ -0.22
HDAC4-207ENST00000461113 TIGD1Q96MW7 591 aa13.7□□□□□ -0.22
HDAC4-207ENST00000461113 CCDC113Q9H0I3 377 aa13.7□□□□□ -0.22
HDAC4-207ENST00000461113 BLZF1Q9H2G9 400 aa13.7□□□□□ -0.22
HDAC4-207ENST00000461113 GOLPH3LQ9H4A5 285 aa13.7□□□□□ -0.22
HDAC4-207ENST00000461113 TBC1D17Q9HA65 648 aa13.7□□□□□ -0.22
HDAC4-207ENST00000461113 OLFML3Q9NRN5 406 aa13.7□□□□□ -0.22
HDAC4-207ENST00000461113 SPG21Q9NZD8 308 aa13.7□□□□□ -0.22
HDAC4-207ENST00000461113 NCDNQ9UBB6 729 aa13.7□□□□□ -0.22
HDAC4-207ENST00000461113 WNT16Q9UBV4 365 aa13.7□□□□□ -0.22
HDAC4-207ENST00000461113 CA14Q9ULX7 337 aa13.7□□□□□ -0.22
HDAC4-207ENST00000461113 PCDHB2Q9Y5E7 798 aa13.7□□□□□ -0.22
HDAC4-207ENST00000461113 LOXHD1Q8IVV2 1947 aa13.7□□□□□ -0.22
HDAC4-207ENST00000461113 MYH15Q9Y2K3 1946 aa13.7□□□□□ -0.22
HDAC4-207ENST00000461113 B4GALT5O43286 388 aa13.69□□□□□ -0.22
HDAC4-207ENST00000461113 ZNF623O75123 536 aa13.69□□□□□ -0.22
HDAC4-207ENST00000461113 KIF20AO95235 890 aa13.69□□□□□ -0.22
HDAC4-207ENST00000461113 CXCL14O95715 111 aa13.69□□□□□ -0.22
HDAC4-207ENST00000461113 ADRB1P08588 477 aa13.69□□□□□ -0.22
HDAC4-207ENST00000461113 ITGA4P13612 1032 aa13.69□□□□□ -0.22
HDAC4-207ENST00000461113 NMT1P30419 496 aaKnown RBP13.69□□□□□ -0.22
HDAC4-207ENST00000461113 HOXA11P31270 313 aaPredicted RBP13.69□□□□□ -0.22
HDAC4-207ENST00000461113 PPM1AP35813 382 aa13.69□□□□□ -0.22
HDAC4-207ENST00000461113 PSMD2Q13200 908 aa13.69□□□□□ -0.22
HDAC4-207ENST00000461113 AMHR2Q16671 573 aa13.69□□□□□ -0.22
HDAC4-207ENST00000461113 FAM26FQ5R3K3 315 aa13.69□□□□□ -0.22
HDAC4-207ENST00000461113 VARS2Q5ST30 1063 aaKnown RBP13.69□□□□□ -0.22
HDAC4-207ENST00000461113 GLB1LQ6UWU2 654 aa13.69□□□□□ -0.22
HDAC4-207ENST00000461113 ZPBP2Q6X784 338 aa13.69□□□□□ -0.22
HDAC4-207ENST00000461113 ZNF720Q7Z2F6 126 aa13.69□□□□□ -0.22
HDAC4-207ENST00000461113 C1orf210Q8IVY1 113 aa13.69□□□□□ -0.22
HDAC4-207ENST00000461113 FMR1NBQ8N0W7 255 aaPredicted RBP13.69□□□□□ -0.22
HDAC4-207ENST00000461113 URGCPQ8TCY9 931 aa13.69□□□□□ -0.22
HDAC4-207ENST00000461113 ACCSQ96QU6 501 aa13.69□□□□□ -0.22
HDAC4-207ENST00000461113 GTPBP4Q9BZE4 634 aaKnown RBP13.69□□□□□ -0.22
HDAC4-207ENST00000461113 ST6GALNAC4Q9H4F1 302 aa13.69□□□□□ -0.22
HDAC4-207ENST00000461113 TMEM206Q9H813 350 aa13.69□□□□□ -0.22
HDAC4-207ENST00000461113 RMND1Q9NWS8 449 aa13.69□□□□□ -0.22
HDAC4-207ENST00000461113 TBC1D7Q9P0N9 293 aa13.69□□□□□ -0.22
HDAC4-207ENST00000461113 CDV3Q9UKY7 258 aaKnown RBP13.69□□□□□ -0.22
HDAC4-207ENST00000461113 TBX20Q9UMR3 447 aa13.69□□□□□ -0.22
HDAC4-207ENST00000461113 TNFSF13BQ9Y275 285 aa13.69□□□□□ -0.22
HDAC4-207ENST00000461113 GPR179Q6PRD1 2367 aa13.69□□□□□ -0.22
HDAC4-207ENST00000461113 MAP1BP46821 2468 aaKnown RBP13.68□□□□□ -0.22
HDAC4-207ENST00000461113 FRMD3A2A2Y4 597 aa13.68□□□□□ -0.22
HDAC4-207ENST00000461113 HNRNPDLO14979 420 aaKnown RBP13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 120.9 ms