RNA–Protein interactions for RNA: ENST00000460428.5

SFPQ-202, Transcript of splicing factor proline and glutamine rich, humanhuman

TSL 2

Gene SFPQ, Length 464 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFPQ-202ENST00000460428 MATR3P43243 847 aaKnown RBP eCLIP8.66□□□□□ -1.02
SFPQ-202ENST00000460428 FCGRTP55899 365 aa8.66□□□□□ -1.02
SFPQ-202ENST00000460428 IGBP1P78318 339 aa8.66□□□□□ -1.02
SFPQ-202ENST00000460428 LACTBP83111 547 aaPredicted RBP8.66□□□□□ -1.02
SFPQ-202ENST00000460428 PURAQ00577 322 aaKnown RBP8.66□□□□□ -1.02
SFPQ-202ENST00000460428 FMO1Q01740 532 aa8.66□□□□□ -1.02
SFPQ-202ENST00000460428 CUL2Q13617 745 aa8.66□□□□□ -1.02
SFPQ-202ENST00000460428 NCOA4Q13772 614 aa8.66□□□□□ -1.02
SFPQ-202ENST00000460428 MFSD10Q14728 455 aa8.66□□□□□ -1.02
SFPQ-202ENST00000460428 SGSM1Q2NKQ1 1148 aa8.66□□□□□ -1.02
SFPQ-202ENST00000460428 ERCC6LQ2NKX8 1250 aa8.66□□□□□ -1.02
SFPQ-202ENST00000460428 ZNF568Q3ZCX4 644 aa8.66□□□□□ -1.02
SFPQ-202ENST00000460428 PPP1R2P3Q6NXS1 205 aa8.66□□□□□ -1.02
SFPQ-202ENST00000460428 NFRKBQ6P4R8 1299 aa8.66□□□□□ -1.02
SFPQ-202ENST00000460428 NOP9Q86U38 636 aaKnown RBP8.66□□□□□ -1.02
SFPQ-202ENST00000460428 RPAINQ86UA6 219 aa8.66□□□□□ -1.02
SFPQ-202ENST00000460428 CREG2Q8IUH2 290 aa8.66□□□□□ -1.02
SFPQ-202ENST00000460428 SYCE1Q8N0S2 351 aa8.66□□□□□ -1.02
SFPQ-202ENST00000460428 MSANTD4Q8NCY6 345 aa8.66□□□□□ -1.02
SFPQ-202ENST00000460428 LRRN4CLQ8ND94 238 aa8.66□□□□□ -1.02
SFPQ-202ENST00000460428 MNS1Q8NEH6 495 aa8.66□□□□□ -1.02
SFPQ-202ENST00000460428 TPCN2Q8NHX9 752 aa8.66□□□□□ -1.02
SFPQ-202ENST00000460428 CXorf38Q8TB03 319 aa8.66□□□□□ -1.02
SFPQ-202ENST00000460428 RFFLQ8WZ73 363 aa8.66□□□□□ -1.02
SFPQ-202ENST00000460428 GOLGA1Q92805 767 aa8.66□□□□□ -1.02
SFPQ-202ENST00000460428 TSPAN18Q96SJ8 248 aa8.66□□□□□ -1.02
SFPQ-202ENST00000460428 ZIC5Q96T25 663 aa8.66□□□□□ -1.02
SFPQ-202ENST00000460428 PCDHB18PQ96TA0 734 aa8.66□□□□□ -1.02
SFPQ-202ENST00000460428 TCHPQ9BT92 498 aa8.66□□□□□ -1.02
SFPQ-202ENST00000460428 AP5M1Q9H0R1 490 aa8.66□□□□□ -1.02
SFPQ-202ENST00000460428 PDZD7Q9H5P4 517 aa8.66□□□□□ -1.02
SFPQ-202ENST00000460428 APOBEC3GQ9HC16 384 aaKnown RBP8.66□□□□□ -1.02
SFPQ-202ENST00000460428 GPBP1L1Q9HC44 474 aaPredicted RBP8.66□□□□□ -1.02
SFPQ-202ENST00000460428 C1orf112Q9NSG2 853 aa8.66□□□□□ -1.02
SFPQ-202ENST00000460428 SETD4Q9NVD3 440 aa8.66□□□□□ -1.02
SFPQ-202ENST00000460428 AKT3Q9Y243 479 aa8.66□□□□□ -1.02
SFPQ-202ENST00000460428 STXBP5LQ9Y2K9 1186 aa8.66□□□□□ -1.02
SFPQ-202ENST00000460428 HYOU1Q9Y4L1 999 aa8.66□□□□□ -1.02
SFPQ-202ENST00000460428 PCDHB2Q9Y5E7 798 aa8.66□□□□□ -1.02
SFPQ-202ENST00000460428 ANK1P16157 1881 aa8.66□□□□□ -1.02
SFPQ-202ENST00000460428 CASP8AP2Q9UKL3 1982 aa8.65□□□□□ -1.02
SFPQ-202ENST00000460428 CTAGE15A4D2H0 777 aa8.65□□□□□ -1.02
SFPQ-202ENST00000460428 ENC1O14682 589 aa8.65□□□□□ -1.02
SFPQ-202ENST00000460428 MEFVO15553 781 aaPredicted RBP8.65□□□□□ -1.02
SFPQ-202ENST00000460428 B4GALT5O43286 388 aa8.65□□□□□ -1.02
SFPQ-202ENST00000460428 BUB1O43683 1085 aa8.65□□□□□ -1.02
SFPQ-202ENST00000460428 PALMO75781 387 aa8.65□□□□□ -1.02
SFPQ-202ENST00000460428 CST3P01034 146 aaPredicted RBP8.65□□□□□ -1.02
SFPQ-202ENST00000460428 CYP1A1P04798 512 aaPredicted RBP8.65□□□□□ -1.02
SFPQ-202ENST00000460428 CYP1A2P05177 515 aa8.65□□□□□ -1.02
SFPQ-202ENST00000460428 RPLP2P05387 115 aaKnown RBP8.65□□□□□ -1.02
SFPQ-202ENST00000460428 CTAGE8P0CG41 777 aa8.65□□□□□ -1.02
SFPQ-202ENST00000460428 STAG3L1P0CL83 205 aa8.65□□□□□ -1.02
SFPQ-202ENST00000460428 GNAT1P11488 350 aa8.65□□□□□ -1.02
SFPQ-202ENST00000460428 UNGP13051 313 aaPredicted RBP8.65□□□□□ -1.02
SFPQ-202ENST00000460428 AXLP30530 894 aa8.65□□□□□ -1.02
SFPQ-202ENST00000460428 HOXA11P31270 313 aaPredicted RBP8.65□□□□□ -1.02
SFPQ-202ENST00000460428 ATICP31939 592 aa8.65□□□□□ -1.02
SFPQ-202ENST00000460428 GRM5P41594 1212 aa8.65□□□□□ -1.02
SFPQ-202ENST00000460428 PIK3CAP42336 1068 aa8.65□□□□□ -1.02
SFPQ-202ENST00000460428 CHMP4BP1P59074 171 aa8.65□□□□□ -1.02
SFPQ-202ENST00000460428 NOP14P78316 857 aaKnown RBP8.65□□□□□ -1.02
SFPQ-202ENST00000460428 GPC5P78333 572 aa8.65□□□□□ -1.02
SFPQ-202ENST00000460428 CKAP4Q07065 602 aaKnown RBP8.65□□□□□ -1.02
SFPQ-202ENST00000460428 NAA30Q147X3 362 aaPredicted RBP8.65□□□□□ -1.02
SFPQ-202ENST00000460428 DCAF4L1Q3SXM0 396 aa8.65□□□□□ -1.02
SFPQ-202ENST00000460428 MFSD14CQ5VZR4 134 aa8.65□□□□□ -1.02
SFPQ-202ENST00000460428 TRIM72Q6ZMU5 477 aa8.65□□□□□ -1.02
SFPQ-202ENST00000460428 APBB1IPQ7Z5R6 666 aaPredicted RBP8.65□□□□□ -1.02
SFPQ-202ENST00000460428 CTAGE6Q86UF2 777 aa8.65□□□□□ -1.02
SFPQ-202ENST00000460428 SLC47A2Q86VL8 602 aa8.65□□□□□ -1.02
SFPQ-202ENST00000460428 PALB2Q86YC2 1186 aa8.65□□□□□ -1.02
SFPQ-202ENST00000460428 CTAGE4Q8IX94 777 aa8.65□□□□□ -1.02
SFPQ-202ENST00000460428 RHOT2Q8IXI1 618 aa8.65□□□□□ -1.02
SFPQ-202ENST00000460428 EFCAB13Q8IY85 973 aa8.65□□□□□ -1.02
SFPQ-202ENST00000460428 RPUSD2Q8IZ73 545 aaKnown RBP8.65□□□□□ -1.02
SFPQ-202ENST00000460428 TRPV1Q8NER1 839 aa8.65□□□□□ -1.02
SFPQ-202ENST00000460428 SLC20A1Q8WUM9 679 aa8.65□□□□□ -1.02
SFPQ-202ENST00000460428 TSC1Q92574 1164 aa8.65□□□□□ -1.02
SFPQ-202ENST00000460428 ZBTB10Q96DT7 871 aa8.65□□□□□ -1.02
SFPQ-202ENST00000460428 VCPIP1Q96JH7 1222 aa8.65□□□□□ -1.02
SFPQ-202ENST00000460428 OSBPL9Q96SU4 736 aa8.65□□□□□ -1.02
SFPQ-202ENST00000460428 GCOM2Q9BZD3 368 aaPredicted RBP8.65□□□□□ -1.02
SFPQ-202ENST00000460428 XYLT2Q9H1B5 865 aa8.65□□□□□ -1.02
SFPQ-202ENST00000460428 RPF1Q9H9Y2 349 aaKnown RBP8.65□□□□□ -1.02
SFPQ-202ENST00000460428 PLEKHA5Q9HAU0 1116 aa8.65□□□□□ -1.02
SFPQ-202ENST00000460428 HDAC6Q9UBN7 1215 aa8.65□□□□□ -1.02
SFPQ-202ENST00000460428 RAB21Q9UL25 225 aa8.65□□□□□ -1.02
SFPQ-202ENST00000460428 DERAQ9Y315 318 aa8.65□□□□□ -1.02
SFPQ-202ENST00000460428 C2CD2Q9Y426 696 aa8.65□□□□□ -1.02
SFPQ-202ENST00000460428 NUB1Q9Y5A7 615 aa8.65□□□□□ -1.02
SFPQ-202ENST00000460428 SEPT4O43236 478 aa8.64□□□□□ -1.03
SFPQ-202ENST00000460428 FTLP02792 175 aaPredicted RBP8.64□□□□□ -1.03
SFPQ-202ENST00000460428 VTNP04004 478 aa8.64□□□□□ -1.03
SFPQ-202ENST00000460428 DARSP14868 501 aaKnown RBP8.64□□□□□ -1.03
SFPQ-202ENST00000460428 CST5P28325 142 aaPredicted RBP8.64□□□□□ -1.03
SFPQ-202ENST00000460428 PSMC4P43686 418 aa8.64□□□□□ -1.03
SFPQ-202ENST00000460428 FLT3LGP49771 235 aa8.64□□□□□ -1.03
SFPQ-202ENST00000460428 PDE6CP51160 858 aa8.64□□□□□ -1.03
SFPQ-202ENST00000460428 BIRC3Q13489 604 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms