RNA–Protein interactions for RNA: ENST00000460048.1

SHANK2-213, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 5

Gene SHANK2, Length 736 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-213ENST00000460048 PRSS55Q6UWB4 352 aaPredicted RBP18.02■□□□□ 0.48
SHANK2-213ENST00000460048 TMC5Q6UXY8 1006 aa18.02■□□□□ 0.48
SHANK2-213ENST00000460048 DYMQ7RTS9 669 aa18.02■□□□□ 0.48
SHANK2-213ENST00000460048 GPR149Q86SP6 731 aa18.02■□□□□ 0.48
SHANK2-213ENST00000460048 C3orf58Q8NDZ4 430 aa18.02■□□□□ 0.48
SHANK2-213ENST00000460048 LNX1Q8TBB1 728 aaPredicted RBP18.02■□□□□ 0.48
SHANK2-213ENST00000460048 HDAC7Q8WUI4 952 aa18.02■□□□□ 0.48
SHANK2-213ENST00000460048 DDX12PQ92771 950 aa18.02■□□□□ 0.48
SHANK2-213ENST00000460048 DNAJC19Q96DA6 116 aa18.02■□□□□ 0.48
SHANK2-213ENST00000460048 TTPALQ9BTX7 342 aa18.02■□□□□ 0.48
SHANK2-213ENST00000460048 ST6GALNAC4Q9H4F1 302 aa18.02■□□□□ 0.48
SHANK2-213ENST00000460048 ZHX3Q9H4I2 956 aa18.02■□□□□ 0.48
SHANK2-213ENST00000460048 MAN1C1Q9NR34 630 aa18.02■□□□□ 0.48
SHANK2-213ENST00000460048 SLC38A7Q9NVC3 462 aa18.02■□□□□ 0.48
SHANK2-213ENST00000460048 TFIP11Q9UBB9 837 aaKnown RBP18.02■□□□□ 0.48
SHANK2-213ENST00000460048 FAM86C2PA6NEL3 165 aa18.01■□□□□ 0.47
SHANK2-213ENST00000460048 MYMKA6NI61 221 aa18.01■□□□□ 0.47
SHANK2-213ENST00000460048 SPTLC2O15270 562 aa18.01■□□□□ 0.47
SHANK2-213ENST00000460048 FAM189A1O60320 539 aa18.01■□□□□ 0.47
SHANK2-213ENST00000460048 B3GAT3O94766 335 aa18.01■□□□□ 0.47
SHANK2-213ENST00000460048 PAPLNO95428 1278 aa18.01■□□□□ 0.47
SHANK2-213ENST00000460048 YEATS4O95619 227 aa18.01■□□□□ 0.47
SHANK2-213ENST00000460048 F13A1P00488 732 aa18.01■□□□□ 0.47
SHANK2-213ENST00000460048 RPL17P18621 184 aaKnown RBP18.01■□□□□ 0.47
SHANK2-213ENST00000460048 FGFR3P22607 806 aa18.01■□□□□ 0.47
SHANK2-213ENST00000460048 ABCD1P33897 745 aa18.01■□□□□ 0.47
SHANK2-213ENST00000460048 LIG4P49917 911 aa18.01■□□□□ 0.47
SHANK2-213ENST00000460048 ATAT1Q5SQI0 421 aa18.01■□□□□ 0.47
SHANK2-213ENST00000460048 SLC39A4Q6P5W5 647 aa18.01■□□□□ 0.47
SHANK2-213ENST00000460048 C15orf39Q6ZRI6 1047 aa18.01■□□□□ 0.47
SHANK2-213ENST00000460048 CCDC73Q6ZRK6 1079 aa18.01■□□□□ 0.47
SHANK2-213ENST00000460048 SV2BQ7L1I2 683 aa18.01■□□□□ 0.47
SHANK2-213ENST00000460048 MAP4K3Q8IVH8 894 aa18.01■□□□□ 0.47
SHANK2-213ENST00000460048 CMASQ8NFW8 434 aaPredicted RBP18.01■□□□□ 0.47
SHANK2-213ENST00000460048 BICD1Q96G01 975 aa18.01■□□□□ 0.47
SHANK2-213ENST00000460048 DDX27Q96GQ7 796 aaKnown RBP18.01■□□□□ 0.47
SHANK2-213ENST00000460048 DOCK6Q96HP0 2047 aa18.01■□□□□ 0.47
SHANK2-213ENST00000460048 HNRNPDLO14979 420 aaKnown RBP18■□□□□ 0.47
SHANK2-213ENST00000460048 TGM5O43548 720 aa18■□□□□ 0.47
SHANK2-213ENST00000460048 CLTAP09496 248 aa18■□□□□ 0.47
SHANK2-213ENST00000460048 MATR3P43243 847 aaKnown RBP eCLIP18■□□□□ 0.475e-7■■■■□ 25.8
SHANK2-213ENST00000460048 ZC2HC1CQ53FD0 456 aaPredicted RBP18■□□□□ 0.47
SHANK2-213ENST00000460048 FOXD4L5Q5VV16 416 aaPredicted RBP18■□□□□ 0.47
SHANK2-213ENST00000460048 PDZRN4Q6ZMN7 1036 aaPredicted RBP18■□□□□ 0.47
SHANK2-213ENST00000460048 ZNF720Q7Z2F6 126 aa18■□□□□ 0.47
SHANK2-213ENST00000460048 SFR1Q86XK3 245 aa18■□□□□ 0.47
SHANK2-213ENST00000460048 CEP57Q86XR8 500 aa18■□□□□ 0.47
SHANK2-213ENST00000460048 PALB2Q86YC2 1186 aa18■□□□□ 0.47
SHANK2-213ENST00000460048 GLYCTKQ8IVS8 523 aa18■□□□□ 0.47
SHANK2-213ENST00000460048 FOXD4L4Q8WXT5 416 aaPredicted RBP18■□□□□ 0.47
SHANK2-213ENST00000460048 CLSTN3Q9BQT9 956 aa18■□□□□ 0.47
SHANK2-213ENST00000460048 RHOBTB2Q9BYZ6 727 aa18■□□□□ 0.47
SHANK2-213ENST00000460048 PANK2Q9BZ23 570 aa18■□□□□ 0.47
SHANK2-213ENST00000460048 PLEKHA4Q9H4M7 779 aa18■□□□□ 0.47
SHANK2-213ENST00000460048 PLEKHA5Q9HAU0 1116 aa18■□□□□ 0.47
SHANK2-213ENST00000460048 DPP7Q9UHL4 492 aa18■□□□□ 0.47
SHANK2-213ENST00000460048 NR2E1Q9Y466 385 aa18■□□□□ 0.47
SHANK2-213ENST00000460048 TECTAO75443 2155 aa18■□□□□ 0.47
SHANK2-213ENST00000460048 TCHHQ07283 1943 aa18■□□□□ 0.47
SHANK2-213ENST00000460048 DOCK8Q8NF50 2099 aa17.99■□□□□ 0.47
SHANK2-213ENST00000460048 A0A0B4J269 797 aa17.99■□□□□ 0.47
SHANK2-213ENST00000460048 TTC26A0AVF1 554 aa17.99■□□□□ 0.47
SHANK2-213ENST00000460048 SPDYE4A6NLX3 237 aa17.99■□□□□ 0.47
SHANK2-213ENST00000460048 PODXLO00592 558 aa17.99■□□□□ 0.47
SHANK2-213ENST00000460048 PPP1R37O75864 691 aa17.99■□□□□ 0.47
SHANK2-213ENST00000460048 ADRB2P07550 413 aa17.99■□□□□ 0.47
SHANK2-213ENST00000460048 CXCL8P10145 99 aa17.99■□□□□ 0.47
SHANK2-213ENST00000460048 COL9A1P20849 921 aa17.99■□□□□ 0.47
SHANK2-213ENST00000460048 TNFSF9P41273 254 aa17.99■□□□□ 0.47
SHANK2-213ENST00000460048 STAT6P42226 847 aa17.99■□□□□ 0.47
SHANK2-213ENST00000460048 BRCC3P46736 316 aa17.99■□□□□ 0.47
SHANK2-213ENST00000460048 PKP1Q13835 747 aa17.99■□□□□ 0.47
SHANK2-213ENST00000460048 PSMD5Q16401 504 aa17.99■□□□□ 0.47
SHANK2-213ENST00000460048 KYAT1Q16773 422 aa17.99■□□□□ 0.47
SHANK2-213ENST00000460048 PDXDC1Q6P996 788 aa17.99■□□□□ 0.47
SHANK2-213ENST00000460048 C18orf25Q96B23 403 aaPredicted RBP17.99■□□□□ 0.47
SHANK2-213ENST00000460048 STRA6Q9BX79 667 aa17.99■□□□□ 0.47
SHANK2-213ENST00000460048 SEL1LQ9UBV2 794 aa17.99■□□□□ 0.47
SHANK2-213ENST00000460048 TRIOO75962 3097 aa17.98■□□□□ 0.47
SHANK2-213ENST00000460048 FRMD3A2A2Y4 597 aa17.98■□□□□ 0.47
SHANK2-213ENST00000460048 PRR33A8MZF0 331 aa17.98■□□□□ 0.47
SHANK2-213ENST00000460048 C2CD4DB7Z1M9 353 aa17.98■□□□□ 0.47
SHANK2-213ENST00000460048 OGTO15294 1046 aa17.98■□□□□ 0.47
SHANK2-213ENST00000460048 CUTAO60888 179 aa17.98■□□□□ 0.47
SHANK2-213ENST00000460048 SPATA31D3P0C874 917 aa17.98■□□□□ 0.47
SHANK2-213ENST00000460048 GAP43P17677 238 aa17.98■□□□□ 0.47
SHANK2-213ENST00000460048 SP100P23497 879 aaPredicted RBP17.98■□□□□ 0.47
SHANK2-213ENST00000460048 RPL9P32969 192 aaKnown RBP17.98■□□□□ 0.47
SHANK2-213ENST00000460048 ZBTB6Q15916 424 aa17.98■□□□□ 0.47
SHANK2-213ENST00000460048 E2F4Q16254 413 aa17.98■□□□□ 0.47
SHANK2-213ENST00000460048 ZBTB41Q5SVQ8 909 aa17.98■□□□□ 0.47
SHANK2-213ENST00000460048 ELMSAN1Q6PJG2 1045 aa17.98■□□□□ 0.47
SHANK2-213ENST00000460048 CYP26C1Q6V0L0 522 aa17.98■□□□□ 0.47
SHANK2-213ENST00000460048 SPATA31D4Q6ZUB0 917 aa17.98■□□□□ 0.47
SHANK2-213ENST00000460048 PDILTQ8N807 584 aa17.98■□□□□ 0.47
SHANK2-213ENST00000460048 SPRYD3Q8NCJ5 442 aa17.98■□□□□ 0.47
SHANK2-213ENST00000460048 EDAQ92838 391 aa17.98■□□□□ 0.47
SHANK2-213ENST00000460048 HVCN1Q96D96 273 aa17.98■□□□□ 0.47
SHANK2-213ENST00000460048 USTQ9Y2C2 406 aa17.98■□□□□ 0.47
SHANK2-213ENST00000460048 STYXL1Q9Y6J8 313 aa17.98■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms