RNA–Protein interactions for RNA: ENST00000459639.5

U2AF1-204, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best) BASIC

Gene U2AF1, Length 1,675 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-204ENST00000459639 ENOSF1Q7L5Y1 443 aa26.34■■□□□ 1.81
U2AF1-204ENST00000459639 XRN2Q9H0D6 950 aaKnown RBP eCLIP26.34■■□□□ 1.81
U2AF1-204ENST00000459639 ASB7Q9H672 318 aa26.34■■□□□ 1.81
U2AF1-204ENST00000459639 HAUS4Q9H6D7 363 aa26.34■■□□□ 1.81
U2AF1-204ENST00000459639 RBAK-RBAKDNI3L0D1 243 aa26.34■■□□□ 1.81
U2AF1-204ENST00000459639 EVI5O60447 810 aa26.34■■□□□ 1.81
U2AF1-204ENST00000459639 PHACTR2O75167 634 aa26.34■■□□□ 1.81
U2AF1-204ENST00000459639 GCNT1Q02742 428 aa26.34■■□□□ 1.81
U2AF1-204ENST00000459639 PTGISQ16647 500 aa26.34■■□□□ 1.81
U2AF1-204ENST00000459639 GLT1D1Q96MS3 346 aa26.34■■□□□ 1.81
U2AF1-204ENST00000459639 MTMR12Q9C0I1 747 aa26.34■■□□□ 1.81
U2AF1-204ENST00000459639 CDY2AQ9Y6F7 541 aa26.34■■□□□ 1.81
U2AF1-204ENST00000459639 MROH7Q68CQ1 1323 aa26.33■■□□□ 1.81
U2AF1-204ENST00000459639 NPTXRO95502 500 aa26.33■■□□□ 1.81
U2AF1-204ENST00000459639 TMEM191BP0C7N4 346 aa26.33■■□□□ 1.81
U2AF1-204ENST00000459639 PNMA6AP0CW24 399 aaPredicted RBP26.33■■□□□ 1.81
U2AF1-204ENST00000459639 ZNF662Q6ZS27 426 aa26.33■■□□□ 1.81
U2AF1-204ENST00000459639 EFCAB13Q8IY85 973 aa26.33■■□□□ 1.81
U2AF1-204ENST00000459639 ARRDC4Q8NCT1 418 aa26.33■■□□□ 1.81
U2AF1-204ENST00000459639 ANKRD36BP1Q96IX9 119 aa26.33■■□□□ 1.81
U2AF1-204ENST00000459639 KREMEN1Q96MU8 473 aa26.33■■□□□ 1.81
U2AF1-204ENST00000459639 ACAP3Q96P50 834 aa26.33■■□□□ 1.81
U2AF1-204ENST00000459639 CCDC94Q9BW85 323 aaPredicted RBP26.33■■□□□ 1.81
U2AF1-204ENST00000459639 WBP1LQ9NX94 342 aa26.33■■□□□ 1.81
U2AF1-204ENST00000459639 PTPN22Q9Y2R2 807 aa26.33■■□□□ 1.81
U2AF1-204ENST00000459639 TNNC2P02585 160 aa26.32■■□□□ 1.8
U2AF1-204ENST00000459639 PTK2Q05397 1052 aa26.32■■□□□ 1.8
U2AF1-204ENST00000459639 NCOA4Q13772 614 aa26.32■■□□□ 1.8
U2AF1-204ENST00000459639 TRAPPC11Q7Z392 1133 aa26.32■■□□□ 1.8
U2AF1-204ENST00000459639 SH3TC2Q8TF17 1288 aa26.32■■□□□ 1.8
U2AF1-204ENST00000459639 SHC3Q92529 594 aa26.32■■□□□ 1.8
U2AF1-204ENST00000459639 WNT8BQ93098 351 aa26.32■■□□□ 1.8
U2AF1-204ENST00000459639 PI4K2AQ9BTU6 479 aa26.32■■□□□ 1.8
U2AF1-204ENST00000459639 PIN4Q9Y237 131 aaKnown RBP26.32■■□□□ 1.8
U2AF1-204ENST00000459639 LACTBL1A8MY62 500 aa26.31■■□□□ 1.8
U2AF1-204ENST00000459639 FOXN3O00409 490 aaPredicted RBP26.31■■□□□ 1.8
U2AF1-204ENST00000459639 ZNF263O14978 683 aa26.31■■□□□ 1.8
U2AF1-204ENST00000459639 PTK7Q13308 1070 aa26.31■■□□□ 1.8
U2AF1-204ENST00000459639 SLC18A3Q16572 532 aa26.31■■□□□ 1.8
U2AF1-204ENST00000459639 ARHGAP29Q52LW3 1261 aa26.31■■□□□ 1.8
U2AF1-204ENST00000459639 KIAA1328Q86T90 577 aa26.31■■□□□ 1.8
U2AF1-204ENST00000459639 CD302Q8IX05 232 aa26.31■■□□□ 1.8
U2AF1-204ENST00000459639 KAT5Q92993 513 aa26.31■■□□□ 1.8
U2AF1-204ENST00000459639 SENP6Q9GZR1 1112 aaPredicted RBP26.31■■□□□ 1.8
U2AF1-204ENST00000459639 PDCD11Q14690 1871 aaKnown RBP26.31■■□□□ 1.8
U2AF1-204ENST00000459639 MEFVO15553 781 aaPredicted RBP26.31■■□□□ 1.8
U2AF1-204ENST00000459639 VAV2P52735 878 aa26.31■■□□□ 1.8
U2AF1-204ENST00000459639 TFAMQ00059 246 aaKnown RBP26.31■■□□□ 1.8
U2AF1-204ENST00000459639 MGAT3Q09327 533 aa26.31■■□□□ 1.8
U2AF1-204ENST00000459639 SLC10A6Q3KNW5 377 aa26.31■■□□□ 1.8
U2AF1-204ENST00000459639 ZNF571Q7Z3V5 609 aaPredicted RBP26.31■■□□□ 1.8
U2AF1-204ENST00000459639 VPS36Q86VN1 386 aa26.31■■□□□ 1.8
U2AF1-204ENST00000459639 FAM228AQ86W67 206 aa26.31■■□□□ 1.8
U2AF1-204ENST00000459639 TATDN2Q93075 761 aa26.31■■□□□ 1.8
U2AF1-204ENST00000459639 IMPG2Q9BZV3 1241 aa26.31■■□□□ 1.8
U2AF1-204ENST00000459639 LZTFL1Q9NQ48 299 aa26.31■■□□□ 1.8
U2AF1-204ENST00000459639 UTP3Q9NQZ2 479 aaKnown RBP eCLIP26.31■■□□□ 1.8
U2AF1-204ENST00000459639 ARHGAP25P42331 645 aa26.3■■□□□ 1.8
U2AF1-204ENST00000459639 CYP27A1Q02318 531 aa26.3■■□□□ 1.8
U2AF1-204ENST00000459639 GFPT1Q06210 699 aaPredicted RBP26.3■■□□□ 1.8
U2AF1-204ENST00000459639 NT5DC4Q86YG4 428 aa26.3■■□□□ 1.8
U2AF1-204ENST00000459639 IFIH1Q9BYX4 1025 aaKnown RBP26.3■■□□□ 1.8
U2AF1-204ENST00000459639 A0A0U1RQJ8 604 aa26.29■■□□□ 1.8
U2AF1-204ENST00000459639 A0A1W2PQ45 241 aaPredicted RBP26.29■■□□□ 1.8
U2AF1-204ENST00000459639 A0A1W2PQY0 241 aa26.29■■□□□ 1.8
U2AF1-204ENST00000459639 ETF1P62495 437 aaKnown RBP26.29■■□□□ 1.8
U2AF1-204ENST00000459639 FAM71AQ8IYT1 594 aa26.29■■□□□ 1.8
U2AF1-204ENST00000459639 TXLNBQ8N3L3 684 aa26.29■■□□□ 1.8
U2AF1-204ENST00000459639 ATRIPQ8WXE1 791 aa26.29■■□□□ 1.8
U2AF1-204ENST00000459639 JAKMIP2Q96AA8 810 aa26.29■■□□□ 1.8
U2AF1-204ENST00000459639 EIF2AQ9BY44 585 aaKnown RBP26.29■■□□□ 1.8
U2AF1-204ENST00000459639 PLEKHA5Q9HAU0 1116 aa26.29■■□□□ 1.8
U2AF1-204ENST00000459639 LUC7LQ9NQ29 371 aaKnown RBP26.29■■□□□ 1.8
U2AF1-204ENST00000459639 PHF24Q9UPV7 400 aa26.29■■□□□ 1.8
U2AF1-204ENST00000459639 NOC2LQ9Y3T9 749 aaKnown RBP26.29■■□□□ 1.8
U2AF1-204ENST00000459639 PCDHA13Q9Y5I0 950 aa26.29■■□□□ 1.8
U2AF1-204ENST00000459639 TRIP11Q15643 1979 aa26.29■■□□□ 1.8
U2AF1-204ENST00000459639 HTTP42858 3142 aa26.29■■□□□ 1.8
U2AF1-204ENST00000459639 ASS1P00966 412 aaKnown RBP26.28■■□□□ 1.8
U2AF1-204ENST00000459639 CHRNA1P02708 482 aa26.28■■□□□ 1.8
U2AF1-204ENST00000459639 NFICP08651 508 aa26.28■■□□□ 1.8
U2AF1-204ENST00000459639 NOP14P78316 857 aaKnown RBP26.28■■□□□ 1.8
U2AF1-204ENST00000459639 JADE1Q6IE81 842 aa26.28■■□□□ 1.8
U2AF1-204ENST00000459639 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP26.28■■□□□ 1.8
U2AF1-204ENST00000459639 TRIM6Q9C030 488 aaPredicted RBP26.28■■□□□ 1.8
U2AF1-204ENST00000459639 NOD1Q9Y239 953 aa26.28■■□□□ 1.8
U2AF1-204ENST00000459639 C2CD2Q9Y426 696 aa26.28■■□□□ 1.8
U2AF1-204ENST00000459639 A0A087X0T9 212 aa26.28■■□□□ 1.8
U2AF1-204ENST00000459639 FAM228BP0C875 321 aa26.28■■□□□ 1.8
U2AF1-204ENST00000459639 TBXAS1P24557 533 aaPredicted RBP26.28■■□□□ 1.8
U2AF1-204ENST00000459639 TRPC3Q13507 836 aa26.28■■□□□ 1.8
U2AF1-204ENST00000459639 BMS1Q14692 1282 aaKnown RBP26.28■■□□□ 1.8
U2AF1-204ENST00000459639 SLC43A3Q8NBI5 491 aa26.28■■□□□ 1.8
U2AF1-204ENST00000459639 SYT11Q9BT88 431 aa26.28■■□□□ 1.8
U2AF1-204ENST00000459639 TSGA10Q9BZW7 698 aa26.28■■□□□ 1.8
U2AF1-204ENST00000459639 UNC93B1Q9H1C4 597 aa26.28■■□□□ 1.8
U2AF1-204ENST00000459639 APOBEC3GQ9HC16 384 aaKnown RBP26.28■■□□□ 1.8
U2AF1-204ENST00000459639 ADAMTS1Q9UHI8 967 aa26.28■■□□□ 1.8
U2AF1-204ENST00000459639 A0A0U1RQG5 324 aaPredicted RBP26.27■■□□□ 1.8
U2AF1-204ENST00000459639 KBTBD13C9JR72 458 aa26.27■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms