RNA–Protein interactions for RNA: ENST00000457179.5

TOP3B-213, Transcript of DNA topoisomerase III beta, humanhuman

TSL 5

Gene TOP3B, Length 3,061 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-213ENST00000457179 PYGBP11216 843 aa14.5□□□□□ -0.09
TOP3B-213ENST00000457179 GCLMP48507 274 aa14.5□□□□□ -0.09
TOP3B-213ENST00000457179 RARRES1P49788 294 aa14.5□□□□□ -0.09
TOP3B-213ENST00000457179 DLG4P78352 724 aa14.5□□□□□ -0.09
TOP3B-213ENST00000457179 C9orf131Q5VYM1 1079 aa14.5□□□□□ -0.09
TOP3B-213ENST00000457179 ZNF720Q7Z2F6 126 aa14.5□□□□□ -0.09
TOP3B-213ENST00000457179 APOBEC3FQ8IUX4 373 aaKnown RBP14.5□□□□□ -0.09
TOP3B-213ENST00000457179 GLYCTKQ8IVS8 523 aa14.5□□□□□ -0.09
TOP3B-213ENST00000457179 BICD1Q96G01 975 aa14.5□□□□□ -0.09
TOP3B-213ENST00000457179 POP1Q99575 1024 aaKnown RBP14.5□□□□□ -0.09
TOP3B-213ENST00000457179 TEX13BQ9BXU2 312 aa14.5□□□□□ -0.09
TOP3B-213ENST00000457179 RAB17Q9H0T7 212 aa14.5□□□□□ -0.09
TOP3B-213ENST00000457179 TUFT1Q9NNX1 390 aa14.5□□□□□ -0.09
TOP3B-213ENST00000457179 TYW1Q9NV66 732 aaKnown RBP14.5□□□□□ -0.09
TOP3B-213ENST00000457179 ZNF214Q9UL59 606 aaPredicted RBP14.5□□□□□ -0.09
TOP3B-213ENST00000457179 UTP11Q9Y3A2 253 aaKnown RBP14.5□□□□□ -0.09
TOP3B-213ENST00000457179 TCP11X1B4DZS4 312 aa14.5□□□□□ -0.09
TOP3B-213ENST00000457179 SNX3O60493 162 aa14.5□□□□□ -0.09
TOP3B-213ENST00000457179 ARHGAP22Q7Z5H3 698 aa14.5□□□□□ -0.09
TOP3B-213ENST00000457179 DAW1Q8N136 415 aa14.5□□□□□ -0.09
TOP3B-213ENST00000457179 GALNT15Q8N3T1 639 aa14.5□□□□□ -0.09
TOP3B-213ENST00000457179 EDEM3Q9BZQ6 932 aa14.5□□□□□ -0.09
TOP3B-213ENST00000457179 ADAM7Q9H2U9 754 aa14.5□□□□□ -0.09
TOP3B-213ENST00000457179 NAGPAQ9UK23 515 aa14.5□□□□□ -0.09
TOP3B-213ENST00000457179 TRAF3IP3Q9Y228 551 aa14.5□□□□□ -0.09
TOP3B-213ENST00000457179 USP15Q9Y4E8 981 aaPredicted RBP14.5□□□□□ -0.09
TOP3B-213ENST00000457179 DLATP10515 647 aaKnown RBP14.49□□□□□ -0.09
TOP3B-213ENST00000457179 GCLCP48506 637 aaPredicted RBP14.49□□□□□ -0.09
TOP3B-213ENST00000457179 SESN3P58005 492 aa14.49□□□□□ -0.09
TOP3B-213ENST00000457179 UBAP2Q5T6F2 1119 aaKnown RBP14.49□□□□□ -0.09
TOP3B-213ENST00000457179 NUGGCQ68CJ6 796 aa14.49□□□□□ -0.09
TOP3B-213ENST00000457179 LMBRD2Q68DH5 695 aaPredicted RBP14.49□□□□□ -0.09
TOP3B-213ENST00000457179 GPC2Q8N158 579 aa14.49□□□□□ -0.09
TOP3B-213ENST00000457179 ZNF513Q8N8E2 541 aaPredicted RBP14.49□□□□□ -0.09
TOP3B-213ENST00000457179 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP14.49□□□□□ -0.091e-6■■■■■ 56.2
TOP3B-213ENST00000457179 SGIP1Q9BQI5 828 aa14.49□□□□□ -0.09
TOP3B-213ENST00000457179 ETNK1Q9HBU6 452 aa14.49□□□□□ -0.09
TOP3B-213ENST00000457179 OSGEPQ9NPF4 335 aa14.49□□□□□ -0.09
TOP3B-213ENST00000457179 TMEM59LQ9UK28 342 aa14.49□□□□□ -0.09
TOP3B-213ENST00000457179 PDXKO00764 312 aa14.49□□□□□ -0.09
TOP3B-213ENST00000457179 USP2O75604 605 aaPredicted RBP14.49□□□□□ -0.09
TOP3B-213ENST00000457179 DENND2CQ68D51 928 aa14.49□□□□□ -0.09
TOP3B-213ENST00000457179 PPP4R3CPQ6ZMV5 832 aa14.49□□□□□ -0.09
TOP3B-213ENST00000457179 SPATA21Q7Z572 469 aa14.49□□□□□ -0.09
TOP3B-213ENST00000457179 FRMD5Q7Z6J6 570 aa14.49□□□□□ -0.09
TOP3B-213ENST00000457179 UPF1Q92900 1129 aaKnown RBP eCLIP14.49□□□□□ -0.09
TOP3B-213ENST00000457179 CENPTQ96BT3 561 aa14.49□□□□□ -0.09
TOP3B-213ENST00000457179 PPP1R16BQ96T49 567 aa14.49□□□□□ -0.09
TOP3B-213ENST00000457179 GORASP1Q9BQQ3 440 aa14.49□□□□□ -0.09
TOP3B-213ENST00000457179 DDX23Q9BUQ8 820 aaKnown RBP14.49□□□□□ -0.09
TOP3B-213ENST00000457179 ACP6Q9NPH0 428 aa14.49□□□□□ -0.09
TOP3B-213ENST00000457179 AIPL1Q9NZN9 384 aa14.49□□□□□ -0.09
TOP3B-213ENST00000457179 PLTPP55058 493 aa14.48□□□□□ -0.09
TOP3B-213ENST00000457179 LLGL1Q15334 1064 aa14.48□□□□□ -0.09
TOP3B-213ENST00000457179 CBWD6Q4V339 395 aa14.48□□□□□ -0.09
TOP3B-213ENST00000457179 CBWD3Q5JTY5 395 aa14.48□□□□□ -0.09
TOP3B-213ENST00000457179 CBWD5Q5RIA9 395 aa14.48□□□□□ -0.09
TOP3B-213ENST00000457179 PCNX4Q63HM2 1172 aa14.48□□□□□ -0.09
TOP3B-213ENST00000457179 METTL13Q8N6R0 699 aa14.48□□□□□ -0.09
TOP3B-213ENST00000457179 ANKRD42Q8N9B4 389 aa14.48□□□□□ -0.09
TOP3B-213ENST00000457179 NSUN6Q8TEA1 469 aaKnown RBP14.48□□□□□ -0.09
TOP3B-213ENST00000457179 RIT2Q99578 217 aa14.48□□□□□ -0.09
TOP3B-213ENST00000457179 AGPAT3Q9NRZ7 376 aa14.48□□□□□ -0.09
TOP3B-213ENST00000457179 SPDYE16A6NNV3 312 aaPredicted RBP14.48□□□□□ -0.09
TOP3B-213ENST00000457179 ALDH3A1P30838 453 aa14.48□□□□□ -0.09
TOP3B-213ENST00000457179 GBP1P32455 592 aa14.48□□□□□ -0.09
TOP3B-213ENST00000457179 MMP13P45452 471 aa14.48□□□□□ -0.09
TOP3B-213ENST00000457179 PDE6CP51160 858 aa14.48□□□□□ -0.09
TOP3B-213ENST00000457179 MARSP56192 900 aaKnown RBP14.48□□□□□ -0.09
TOP3B-213ENST00000457179 LRRC23Q53EV4 343 aaPredicted RBP14.48□□□□□ -0.09
TOP3B-213ENST00000457179 EPM2AIP1Q7L775 607 aaPredicted RBP14.48□□□□□ -0.09
TOP3B-213ENST00000457179 HAUS6Q7Z4H7 955 aa14.48□□□□□ -0.09
TOP3B-213ENST00000457179 TEX9Q8N6V9 391 aa14.48□□□□□ -0.09
TOP3B-213ENST00000457179 GDAP1Q8TB36 358 aa14.48□□□□□ -0.09
TOP3B-213ENST00000457179 EPS8L3Q8TE67 593 aaKnown RBP14.48□□□□□ -0.09
TOP3B-213ENST00000457179 SCFD2Q8WU76 684 aa14.48□□□□□ -0.09
TOP3B-213ENST00000457179 TMEM143Q96AN5 459 aa14.48□□□□□ -0.09
TOP3B-213ENST00000457179 PAIP2Q9BPZ3 127 aaKnown RBP14.48□□□□□ -0.09
TOP3B-213ENST00000457179 DBR1Q9UK59 544 aaKnown RBP14.48□□□□□ -0.09
TOP3B-213ENST00000457179 SUN1O94901 812 aa14.47□□□□□ -0.09
TOP3B-213ENST00000457179 DSG3P32926 999 aa14.47□□□□□ -0.09
TOP3B-213ENST00000457179 ZNF131P52739 623 aa14.47□□□□□ -0.09
TOP3B-213ENST00000457179 MAP3K10Q02779 954 aa14.47□□□□□ -0.09
TOP3B-213ENST00000457179 CUL3Q13618 768 aa14.47□□□□□ -0.09
TOP3B-213ENST00000457179 GPR162Q16538 588 aa14.47□□□□□ -0.09
TOP3B-213ENST00000457179 FAM47EQ6ZV65 393 aa14.47□□□□□ -0.09
TOP3B-213ENST00000457179 FITM2Q8N6M3 262 aa14.47□□□□□ -0.09
TOP3B-213ENST00000457179 KLHL23Q8NBE8 558 aa14.47□□□□□ -0.09
TOP3B-213ENST00000457179 SYT17Q9BSW7 474 aa14.47□□□□□ -0.09
TOP3B-213ENST00000457179 WDR64B1ANS9 1081 aa14.47□□□□□ -0.09
TOP3B-213ENST00000457179 DDX3XO00571 662 aaKnown RBP eCLIP14.47□□□□□ -0.093e-9■■■□□ 17
TOP3B-213ENST00000457179 PSMC2P35998 433 aaKnown RBP14.47□□□□□ -0.09
TOP3B-213ENST00000457179 SLC29A2Q14542 456 aa14.47□□□□□ -0.09
TOP3B-213ENST00000457179 DRAP1Q14919 205 aaPredicted RBP14.47□□□□□ -0.09
TOP3B-213ENST00000457179 SEZ6Q53EL9 994 aa14.47□□□□□ -0.09
TOP3B-213ENST00000457179 ANO5Q75V66 913 aa14.47□□□□□ -0.09
TOP3B-213ENST00000457179 PEX26Q7Z412 305 aa14.47□□□□□ -0.09
TOP3B-213ENST00000457179 SYN2Q92777 582 aaPredicted RBP14.47□□□□□ -0.09
TOP3B-213ENST00000457179 PBKQ96KB5 322 aa14.47□□□□□ -0.09
TOP3B-213ENST00000457179 ACAD9Q9H845 621 aa14.47□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms