RNA–Protein interactions for RNA: ENST00000456581.1

LINC00959-201, Transcript of HCG1648656, isoform CRA_a, humanhuman

TSL 2

Gene LINC00959, Length 2,843 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00959-201ENST00000456581 UBE4BO95155 1302 aa13.3□□□□□ -0.28
LINC00959-201ENST00000456581 ATXN2Q99700 1313 aaKnown RBP13.3□□□□□ -0.28
LINC00959-201ENST00000456581 SPATA31C2B4DYI2 1134 aa13.3□□□□□ -0.28
LINC00959-201ENST00000456581 UPP2O95045 317 aa13.3□□□□□ -0.28
LINC00959-201ENST00000456581 PYGMP11217 842 aa13.3□□□□□ -0.28
LINC00959-201ENST00000456581 COMTP21964 271 aa13.3□□□□□ -0.28
LINC00959-201ENST00000456581 CNGA1P29973 690 aa13.3□□□□□ -0.28
LINC00959-201ENST00000456581 VAMP7P51809 220 aa13.3□□□□□ -0.28
LINC00959-201ENST00000456581 MTMR3Q13615 1198 aa13.3□□□□□ -0.28
LINC00959-201ENST00000456581 TRIP13Q15645 432 aaPredicted RBP13.3□□□□□ -0.28
LINC00959-201ENST00000456581 SH3D19Q5HYK7 790 aa13.3□□□□□ -0.28
LINC00959-201ENST00000456581 TMEM63BQ5T3F8 832 aa13.3□□□□□ -0.28
LINC00959-201ENST00000456581 AGBL2Q5U5Z8 902 aa13.3□□□□□ -0.28
LINC00959-201ENST00000456581 GKAP1Q5VSY0 366 aaPredicted RBP13.3□□□□□ -0.28
LINC00959-201ENST00000456581 ABHD15Q6UXT9 468 aa13.3□□□□□ -0.28
LINC00959-201ENST00000456581 PARP9Q8IXQ6 854 aa13.3□□□□□ -0.28
LINC00959-201ENST00000456581 TCP11Q8WWU5 503 aa13.3□□□□□ -0.28
LINC00959-201ENST00000456581 TLCD1Q96CP7 247 aa13.3□□□□□ -0.28
LINC00959-201ENST00000456581 SYT17Q9BSW7 474 aa13.3□□□□□ -0.28
LINC00959-201ENST00000456581 KMT5AQ9NQR1 393 aa13.3□□□□□ -0.28
LINC00959-201ENST00000456581 FAM114A2Q9NRY5 505 aa13.3□□□□□ -0.28
LINC00959-201ENST00000456581 CTNNAL1Q9UBT7 734 aa13.3□□□□□ -0.28
LINC00959-201ENST00000456581 TBX20Q9UMR3 447 aa13.3□□□□□ -0.28
LINC00959-201ENST00000456581 WDR90Q96KV7 1748 aa13.3□□□□□ -0.28
LINC00959-201ENST00000456581 NCANO14594 1321 aa13.3□□□□□ -0.28
LINC00959-201ENST00000456581 A0A0A6YYK5 440 aaPredicted RBP13.3□□□□□ -0.28
LINC00959-201ENST00000456581 MAP2K1Q02750 393 aaPredicted RBP13.3□□□□□ -0.28
LINC00959-201ENST00000456581 SNX1Q13596 522 aa13.3□□□□□ -0.28
LINC00959-201ENST00000456581 Q3C1V9 767 aa13.3□□□□□ -0.28
LINC00959-201ENST00000456581 ERMARDQ5T6L9 678 aa13.3□□□□□ -0.28
LINC00959-201ENST00000456581 HIBCHQ6NVY1 386 aaPredicted RBP13.3□□□□□ -0.28
LINC00959-201ENST00000456581 LLGL2Q6P1M3 1020 aa13.3□□□□□ -0.28
LINC00959-201ENST00000456581 SLC9A9Q8IVB4 645 aa13.3□□□□□ -0.28
LINC00959-201ENST00000456581 RPUSD2Q8IZ73 545 aaKnown RBP13.3□□□□□ -0.28
LINC00959-201ENST00000456581 SAMD3Q8N6K7 520 aa13.3□□□□□ -0.28
LINC00959-201ENST00000456581 XXYLT1Q8NBI6 393 aa13.3□□□□□ -0.28
LINC00959-201ENST00000456581 C1orf131Q8NDD1 294 aaKnown RBP13.3□□□□□ -0.28
LINC00959-201ENST00000456581 CHMP6Q96FZ7 201 aa13.3□□□□□ -0.28
LINC00959-201ENST00000456581 ANKEF1Q9NU02 776 aa13.3□□□□□ -0.28
LINC00959-201ENST00000456581 TRIM33Q9UPN9 1127 aa13.3□□□□□ -0.28
LINC00959-201ENST00000456581 PPP2R3BQ9Y5P8 575 aa13.3□□□□□ -0.28
LINC00959-201ENST00000456581 OTOFQ9HC10 1997 aa13.29□□□□□ -0.28
LINC00959-201ENST00000456581 GTPBP10A4D1E9 387 aaKnown RBP13.29□□□□□ -0.28
LINC00959-201ENST00000456581 SOWAHBA6NEL2 793 aa13.29□□□□□ -0.28
LINC00959-201ENST00000456581 SGPL1O95470 568 aa13.29□□□□□ -0.28
LINC00959-201ENST00000456581 PTGIRP43119 386 aa13.29□□□□□ -0.28
LINC00959-201ENST00000456581 NCKAP1LP55160 1127 aa13.29□□□□□ -0.28
LINC00959-201ENST00000456581 DMP1Q13316 513 aaPredicted RBP13.29□□□□□ -0.28
LINC00959-201ENST00000456581 LONRF1Q17RB8 773 aa13.29□□□□□ -0.28
LINC00959-201ENST00000456581 EPC2Q52LR7 807 aa13.29□□□□□ -0.28
LINC00959-201ENST00000456581 DENND2CQ68D51 928 aa13.29□□□□□ -0.28
LINC00959-201ENST00000456581 TBC1D1Q86TI0 1168 aaPredicted RBP13.29□□□□□ -0.28
LINC00959-201ENST00000456581 SPATS2Q86XZ4 545 aaKnown RBP13.29□□□□□ -0.28
LINC00959-201ENST00000456581 ATXN2LQ8WWM7 1075 aaKnown RBP13.29□□□□□ -0.28
LINC00959-201ENST00000456581 PRCCQ92733 491 aaPredicted RBP13.29□□□□□ -0.28
LINC00959-201ENST00000456581 N4BP2L2Q92802 583 aaPredicted RBP13.29□□□□□ -0.28
LINC00959-201ENST00000456581 ZNF317Q96PQ6 595 aaPredicted RBP13.29□□□□□ -0.28
LINC00959-201ENST00000456581 TMEM206Q9H813 350 aa13.29□□□□□ -0.28
LINC00959-201ENST00000456581 CYP26B1Q9NR63 512 aa13.29□□□□□ -0.28
LINC00959-201ENST00000456581 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.29□□□□□ -0.28
LINC00959-201ENST00000456581 BAIAP2L1Q9UHR4 511 aa13.29□□□□□ -0.28
LINC00959-201ENST00000456581 ACSL3O95573 720 aa13.29□□□□□ -0.28
LINC00959-201ENST00000456581 PSAPP07602 524 aa13.29□□□□□ -0.28
LINC00959-201ENST00000456581 STXBP2Q15833 593 aa13.29□□□□□ -0.28
LINC00959-201ENST00000456581 LMBRD2Q68DH5 695 aaPredicted RBP13.29□□□□□ -0.28
LINC00959-201ENST00000456581 TAS1R3Q7RTX0 852 aa13.29□□□□□ -0.28
LINC00959-201ENST00000456581 KIF2BQ8N4N8 673 aa13.29□□□□□ -0.28
LINC00959-201ENST00000456581 ATP6V0A1Q93050 837 aa13.29□□□□□ -0.28
LINC00959-201ENST00000456581 AGPAT1Q99943 283 aa13.29□□□□□ -0.28
LINC00959-201ENST00000456581 FAM129AQ9BZQ8 928 aa13.29□□□□□ -0.28
LINC00959-201ENST00000456581 SPATC1LQ9H0A9 340 aa13.29□□□□□ -0.28
LINC00959-201ENST00000456581 ASCC2Q9H1I8 757 aaPredicted RBP13.29□□□□□ -0.28
LINC00959-201ENST00000456581 PABPC3Q9H361 631 aaKnown RBP13.29□□□□□ -0.28
LINC00959-201ENST00000456581 PAPPA2Q9BXP8 1791 aa13.29□□□□□ -0.28
LINC00959-201ENST00000456581 BRCA2P51587 3418 aa13.28□□□□□ -0.28
LINC00959-201ENST00000456581 CHUKO15111 745 aa13.28□□□□□ -0.28
LINC00959-201ENST00000456581 VIMP08670 466 aaKnown RBP13.28□□□□□ -0.28
LINC00959-201ENST00000456581 DLATP10515 647 aaKnown RBP13.28□□□□□ -0.28
LINC00959-201ENST00000456581 VPS41P49754 854 aa13.28□□□□□ -0.28
LINC00959-201ENST00000456581 ALDH5A1P51649 535 aaPredicted RBP13.28□□□□□ -0.28
LINC00959-201ENST00000456581 KCNJ2P63252 427 aa13.28□□□□□ -0.28
LINC00959-201ENST00000456581 PPP1R7Q15435 360 aa13.28□□□□□ -0.28
LINC00959-201ENST00000456581 LY6KQ17RY6 165 aa13.28□□□□□ -0.28
LINC00959-201ENST00000456581 WDR78Q5VTH9 848 aa13.28□□□□□ -0.28
LINC00959-201ENST00000456581 XRRA1Q6P2D8 792 aa13.28□□□□□ -0.28
LINC00959-201ENST00000456581 CCDC137Q6PK04 289 aaKnown RBP13.28□□□□□ -0.28
LINC00959-201ENST00000456581 SLC47A2Q86VL8 602 aa13.28□□□□□ -0.28
LINC00959-201ENST00000456581 C1orf54Q8WWF1 131 aa13.28□□□□□ -0.28
LINC00959-201ENST00000456581 ATG4AQ8WYN0 398 aa13.28□□□□□ -0.28
LINC00959-201ENST00000456581 SEMA4DQ92854 862 aa13.28□□□□□ -0.28
LINC00959-201ENST00000456581 THOC1Q96FV9 657 aaKnown RBP13.28□□□□□ -0.28
LINC00959-201ENST00000456581 TRIM7Q9C029 511 aa13.28□□□□□ -0.28
LINC00959-201ENST00000456581 TMEM117Q9H0C3 514 aa13.28□□□□□ -0.28
LINC00959-201ENST00000456581 RGS16O15492 202 aaPredicted RBP13.28□□□□□ -0.28
LINC00959-201ENST00000456581 CLTAP09496 248 aa13.28□□□□□ -0.28
LINC00959-201ENST00000456581 CDR1P51861 262 aa13.28□□□□□ -0.28
LINC00959-201ENST00000456581 PPP2R5AQ15172 486 aa13.28□□□□□ -0.28
LINC00959-201ENST00000456581 SNRNP35Q16560 246 aaKnown RBP13.28□□□□□ -0.28
LINC00959-201ENST00000456581 GNPTABQ3T906 1256 aa13.28□□□□□ -0.28
LINC00959-201ENST00000456581 PRUNE1Q86TP1 453 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 130.9 ms