RNA–Protein interactions for RNA: ENST00000456222.1

SEC22C-213, Transcript of SEC22 homolog C, vesicle trafficking protein, humanhuman

TSL 4

Gene SEC22C, Length 558 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22C-213ENST00000456222 DCLRE1AQ6PJP8 1040 aa23.85■■□□□ 1.41
SEC22C-213ENST00000456222 PDZRN4Q6ZMN7 1036 aaPredicted RBP23.85■■□□□ 1.41
SEC22C-213ENST00000456222 GET4Q7L5D6 327 aaPredicted RBP23.85■■□□□ 1.41
SEC22C-213ENST00000456222 SYT2Q8N9I0 419 aaPredicted RBP23.85■■□□□ 1.41
SEC22C-213ENST00000456222 TMEM161BQ8NDZ6 487 aa23.85■■□□□ 1.41
SEC22C-213ENST00000456222 SNX27Q96L92 541 aa23.85■■□□□ 1.41
SEC22C-213ENST00000456222 TBC1D32Q96NH3 1257 aa23.85■■□□□ 1.41
SEC22C-213ENST00000456222 PRRX2Q99811 253 aa23.85■■□□□ 1.41
SEC22C-213ENST00000456222 NTPCRQ9BSD7 190 aaKnown RBP23.85■■□□□ 1.41
SEC22C-213ENST00000456222 CCDC94Q9BW85 323 aaPredicted RBP23.85■■□□□ 1.41
SEC22C-213ENST00000456222 H0Y858 1186 aa23.84■■□□□ 1.41
SEC22C-213ENST00000456222 HARSP12081 509 aaKnown RBP23.84■■□□□ 1.41
SEC22C-213ENST00000456222 OR1D2P34982 312 aa23.84■■□□□ 1.41
SEC22C-213ENST00000456222 GRIN1Q05586 938 aa23.84■■□□□ 1.41
SEC22C-213ENST00000456222 ELAVL2Q12926 359 aaKnown RBP23.84■■□□□ 1.41
SEC22C-213ENST00000456222 ARSHQ5FYA8 562 aa23.84■■□□□ 1.41
SEC22C-213ENST00000456222 MPZL3Q6UWV2 235 aa23.84■■□□□ 1.41
SEC22C-213ENST00000456222 GRASPQ7Z6J2 395 aaPredicted RBP23.84■■□□□ 1.41
SEC22C-213ENST00000456222 STAMQ92783 540 aa23.84■■□□□ 1.41
SEC22C-213ENST00000456222 C18orf25Q96B23 403 aaPredicted RBP23.84■■□□□ 1.41
SEC22C-213ENST00000456222 DDX27Q96GQ7 796 aaKnown RBP23.84■■□□□ 1.41
SEC22C-213ENST00000456222 C17orf75Q9HAS0 396 aa23.84■■□□□ 1.41
SEC22C-213ENST00000456222 IGSF9Q9P2J2 1179 aa23.84■■□□□ 1.41
SEC22C-213ENST00000456222 MTRRQ9UBK8 725 aa23.84■■□□□ 1.41
SEC22C-213ENST00000456222 SMC3Q9UQE7 1217 aa23.84■■□□□ 1.41
SEC22C-213ENST00000456222 RBM19Q9Y4C8 960 aaKnown RBP23.84■■□□□ 1.41
SEC22C-213ENST00000456222 C8AP07357 584 aa23.83■■□□□ 1.41
SEC22C-213ENST00000456222 PLA2G4BP0C869 781 aa23.83■■□□□ 1.41
SEC22C-213ENST00000456222 MAPTP10636 758 aaKnown RBP23.83■■□□□ 1.41
SEC22C-213ENST00000456222 MCF2P10911 925 aa23.83■■□□□ 1.41
SEC22C-213ENST00000456222 PLS3P13797 630 aa23.83■■□□□ 1.41
SEC22C-213ENST00000456222 ASTLQ6HA08 431 aaPredicted RBP23.83■■□□□ 1.41
SEC22C-213ENST00000456222 SPIRE2Q8WWL2 714 aa23.83■■□□□ 1.41
SEC22C-213ENST00000456222 TCHPQ9BT92 498 aa23.83■■□□□ 1.41
SEC22C-213ENST00000456222 HAPLN2Q9GZV7 340 aa23.83■■□□□ 1.41
SEC22C-213ENST00000456222 CCL16O15467 120 aa23.82■■□□□ 1.4
SEC22C-213ENST00000456222 GALR2O43603 387 aaPredicted RBP23.82■■□□□ 1.4
SEC22C-213ENST00000456222 PI15O43692 258 aa23.82■■□□□ 1.4
SEC22C-213ENST00000456222 LAMP2P13473 410 aa23.82■■□□□ 1.4
SEC22C-213ENST00000456222 YARSP54577 528 aaKnown RBP23.82■■□□□ 1.4
SEC22C-213ENST00000456222 RAB33AQ14088 237 aa23.82■■□□□ 1.4
SEC22C-213ENST00000456222 ARL6IP4Q66PJ3 421 aaKnown RBP23.82■■□□□ 1.4
SEC22C-213ENST00000456222 APBB1IPQ7Z5R6 666 aaPredicted RBP23.82■■□□□ 1.4
SEC22C-213ENST00000456222 SLC44A3Q8N4M1 653 aa23.82■■□□□ 1.4
SEC22C-213ENST00000456222 FLCNQ8NFG4 579 aa23.82■■□□□ 1.4
SEC22C-213ENST00000456222 SLC7A14Q8TBB6 771 aa23.82■■□□□ 1.4
SEC22C-213ENST00000456222 UROC1Q96N76 676 aa23.82■■□□□ 1.4
SEC22C-213ENST00000456222 ACAP3Q96P50 834 aa23.82■■□□□ 1.4
SEC22C-213ENST00000456222 TIPINQ9BVW5 301 aa23.82■■□□□ 1.4
SEC22C-213ENST00000456222 MFSD1Q9H3U5 465 aa23.82■■□□□ 1.4
SEC22C-213ENST00000456222 TOPORSQ9NS56 1045 aaPredicted RBP23.82■■□□□ 1.4
SEC22C-213ENST00000456222 ANKFY1Q9P2R3 1169 aa23.82■■□□□ 1.4
SEC22C-213ENST00000456222 CDY1Q9Y6F8 540 aa23.82■■□□□ 1.4
SEC22C-213ENST00000456222 MYH15Q9Y2K3 1946 aa23.81■■□□□ 1.4
SEC22C-213ENST00000456222 CFHP08603 1231 aa23.81■■□□□ 1.4
SEC22C-213ENST00000456222 KCNE1P15382 129 aa23.81■■□□□ 1.4
SEC22C-213ENST00000456222 PPM1LQ5SGD2 360 aa23.81■■□□□ 1.4
SEC22C-213ENST00000456222 AXDND1Q5T1B0 1012 aaPredicted RBP23.81■■□□□ 1.4
SEC22C-213ENST00000456222 LIN9Q5TKA1 542 aa23.81■■□□□ 1.4
SEC22C-213ENST00000456222 LARP1BQ659C4 914 aaKnown RBP23.81■■□□□ 1.4
SEC22C-213ENST00000456222 SIX5Q8N196 739 aa23.81■■□□□ 1.4
SEC22C-213ENST00000456222 RPP25Q9BUL9 199 aaKnown RBP23.81■■□□□ 1.4
SEC22C-213ENST00000456222 CNTN3Q9P232 1028 aa23.81■■□□□ 1.4
SEC22C-213ENST00000456222 KRBA1A5PL33 1030 aa23.8■■□□□ 1.4
SEC22C-213ENST00000456222 PODXLO00592 558 aa23.8■■□□□ 1.4
SEC22C-213ENST00000456222 FSHRP23945 695 aa23.8■■□□□ 1.4
SEC22C-213ENST00000456222 HTR4Q13639 388 aa23.8■■□□□ 1.4
SEC22C-213ENST00000456222 SLC10A6Q3KNW5 377 aa23.8■■□□□ 1.4
SEC22C-213ENST00000456222 CDK5RAP3Q96JB5 506 aa23.8■■□□□ 1.4
SEC22C-213ENST00000456222 UPF2Q9HAU5 1272 aaKnown RBP23.8■■□□□ 1.4
SEC22C-213ENST00000456222 HCFC1R1Q9NWW0 138 aa23.8■■□□□ 1.4
SEC22C-213ENST00000456222 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP23.8■■□□□ 1.4
SEC22C-213ENST00000456222 FBXL21Q9UKT6 434 aa23.8■■□□□ 1.4
SEC22C-213ENST00000456222 ANHXE9PGG2 379 aa23.79■■□□□ 1.4
SEC22C-213ENST00000456222 TOM1L1O75674 476 aa23.79■■□□□ 1.4
SEC22C-213ENST00000456222 HNRNPA1P09651 372 aaKnown RBP eCLIP23.79■■□□□ 1.4
SEC22C-213ENST00000456222 MCM2P49736 904 aa23.79■■□□□ 1.4
SEC22C-213ENST00000456222 CLCN5P51795 746 aa23.79■■□□□ 1.4
SEC22C-213ENST00000456222 NOLC1Q14978 699 aaKnown RBP eCLIP23.79■■□□□ 1.4
SEC22C-213ENST00000456222 PDXDC1Q6P996 788 aa23.79■■□□□ 1.4
SEC22C-213ENST00000456222 ITFG1Q8TB96 612 aa23.79■■□□□ 1.4
SEC22C-213ENST00000456222 ATOH1Q92858 354 aaPredicted RBP23.79■■□□□ 1.4
SEC22C-213ENST00000456222 REEP2Q9BRK0 252 aa23.79■■□□□ 1.4
SEC22C-213ENST00000456222 BLOC1S4Q9NUP1 217 aa23.79■■□□□ 1.4
SEC22C-213ENST00000456222 POLIQ9UNA4 740 aa23.79■■□□□ 1.4
SEC22C-213ENST00000456222 BACE2Q9Y5Z0 518 aa23.79■■□□□ 1.4
SEC22C-213ENST00000456222 RIF1Q5UIP0 2472 aaKnown RBP23.79■■□□□ 1.4
SEC22C-213ENST00000456222 HOXA9P31269 272 aa23.78■■□□□ 1.4
SEC22C-213ENST00000456222 STRN3Q13033 797 aa23.78■■□□□ 1.4
SEC22C-213ENST00000456222 DHX8Q14562 1220 aaKnown RBP23.78■■□□□ 1.4
SEC22C-213ENST00000456222 SLC38A7Q9NVC3 462 aa23.78■■□□□ 1.4
SEC22C-213ENST00000456222 DAXXQ9UER7 740 aaPredicted RBP23.78■■□□□ 1.4
SEC22C-213ENST00000456222 TUBGCP4Q9UGJ1 667 aa23.78■■□□□ 1.4
SEC22C-213ENST00000456222 NUMBLQ9Y6R0 609 aa23.78■■□□□ 1.4
SEC22C-213ENST00000456222 COL4A3Q01955 1670 aa23.78■■□□□ 1.4
SEC22C-213ENST00000456222 CXCL8P10145 99 aa23.77■■□□□ 1.4
SEC22C-213ENST00000456222 AOC1P19801 751 aa23.77■■□□□ 1.4
SEC22C-213ENST00000456222 NCKAP1LP55160 1127 aa23.77■■□□□ 1.4
SEC22C-213ENST00000456222 SPAG1Q07617 926 aa23.77■■□□□ 1.4
SEC22C-213ENST00000456222 MCL1Q07820 350 aa23.77■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms