RNA–Protein interactions for RNA: ENST00000455551.6

SEMA4D-213, Transcript of semaphorin 4D, humanhuman

TSL 5 BASIC

Gene SEMA4D, Length 3,594 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-213ENST00000455551 VPS41P49754 854 aa13.08□□□□□ -0.32
SEMA4D-213ENST00000455551 ZNF280AP59817 542 aaPredicted RBP13.08□□□□□ -0.32
SEMA4D-213ENST00000455551 BRDTQ58F21 947 aaPredicted RBP13.08□□□□□ -0.32
SEMA4D-213ENST00000455551 FBXW10Q5XX13 1052 aa13.08□□□□□ -0.32
SEMA4D-213ENST00000455551 SCYL3Q8IZE3 742 aa13.08□□□□□ -0.32
SEMA4D-213ENST00000455551 REPS2Q8NFH8 660 aa13.08□□□□□ -0.32
SEMA4D-213ENST00000455551 RDM1Q8NG50 284 aa13.08□□□□□ -0.32
SEMA4D-213ENST00000455551 MORC4Q8TE76 937 aa13.08□□□□□ -0.32
SEMA4D-213ENST00000455551 PSPC1Q8WXF1 523 aaKnown RBP13.08□□□□□ -0.32
SEMA4D-213ENST00000455551 CHST7Q9NS84 486 aa13.08□□□□□ -0.32
SEMA4D-213ENST00000455551 CNOT7Q9UIV1 285 aaKnown RBP13.08□□□□□ -0.32
SEMA4D-213ENST00000455551 CAPN7Q9Y6W3 813 aa13.08□□□□□ -0.32
SEMA4D-213ENST00000455551 PASKQ96RG2 1323 aa13.08□□□□□ -0.32
SEMA4D-213ENST00000455551 NFKBIEO00221 500 aa13.07□□□□□ -0.32
SEMA4D-213ENST00000455551 ZBTB7AO95365 584 aa13.07□□□□□ -0.32
SEMA4D-213ENST00000455551 GGPS1O95749 300 aa13.07□□□□□ -0.32
SEMA4D-213ENST00000455551 SP2Q02086 613 aa13.07□□□□□ -0.32
SEMA4D-213ENST00000455551 SLC20A2Q08357 652 aa13.07□□□□□ -0.32
SEMA4D-213ENST00000455551 FSTL1Q12841 308 aa13.07□□□□□ -0.32
SEMA4D-213ENST00000455551 EMC2Q15006 297 aa13.07□□□□□ -0.32
SEMA4D-213ENST00000455551 TDRD10Q5VZ19 366 aaKnown RBP13.07□□□□□ -0.32
SEMA4D-213ENST00000455551 TLCD1Q96CP7 247 aa13.07□□□□□ -0.32
SEMA4D-213ENST00000455551 C11orf70Q9BRQ4 267 aa13.07□□□□□ -0.32
SEMA4D-213ENST00000455551 HEMGNQ9BXL5 484 aa13.07□□□□□ -0.32
SEMA4D-213ENST00000455551 CYP39A1Q9NYL5 469 aa13.07□□□□□ -0.32
SEMA4D-213ENST00000455551 ASIC3Q9UHC3 531 aa13.07□□□□□ -0.32
SEMA4D-213ENST00000455551 MROH7Q68CQ1 1323 aa13.07□□□□□ -0.32
SEMA4D-213ENST00000455551 RGS16O15492 202 aaPredicted RBP13.07□□□□□ -0.32
SEMA4D-213ENST00000455551 NUDT17P0C025 328 aa13.07□□□□□ -0.32
SEMA4D-213ENST00000455551 DRG2P55039 364 aaKnown RBP13.07□□□□□ -0.32
SEMA4D-213ENST00000455551 KRT17Q04695 432 aa13.07□□□□□ -0.32
SEMA4D-213ENST00000455551 CCDC38Q502W7 563 aa13.07□□□□□ -0.32
SEMA4D-213ENST00000455551 DALRD3Q5D0E6 543 aaKnown RBP13.07□□□□□ -0.32
SEMA4D-213ENST00000455551 WDR44Q5JSH3 913 aa13.07□□□□□ -0.32
SEMA4D-213ENST00000455551 MCOLN2Q8IZK6 566 aa13.07□□□□□ -0.32
SEMA4D-213ENST00000455551 VPS33BQ9H267 617 aa13.07□□□□□ -0.32
SEMA4D-213ENST00000455551 ARHGAP28Q9P2N2 729 aa13.07□□□□□ -0.32
SEMA4D-213ENST00000455551 MYH9P35579 1960 aaKnown RBP13.07□□□□□ -0.32
SEMA4D-213ENST00000455551 GJB6O95452 261 aa13.07□□□□□ -0.32
SEMA4D-213ENST00000455551 GARTP22102 1010 aa13.07□□□□□ -0.32
SEMA4D-213ENST00000455551 GTF2H1P32780 548 aa13.07□□□□□ -0.32
SEMA4D-213ENST00000455551 DSG3P32926 999 aa13.07□□□□□ -0.32
SEMA4D-213ENST00000455551 SSR1P43307 286 aaKnown RBP13.07□□□□□ -0.32
SEMA4D-213ENST00000455551 GCNT1Q02742 428 aa13.07□□□□□ -0.32
SEMA4D-213ENST00000455551 SCARA3Q6AZY7 606 aa13.07□□□□□ -0.32
SEMA4D-213ENST00000455551 MICALCLQ6ZW33 695 aa13.07□□□□□ -0.32
SEMA4D-213ENST00000455551 CCDC50Q8IVM0 306 aa13.07□□□□□ -0.32
SEMA4D-213ENST00000455551 ASAP3Q8TDY4 903 aa13.07□□□□□ -0.32
SEMA4D-213ENST00000455551 SENP7Q9BQF6 1050 aa13.07□□□□□ -0.32
SEMA4D-213ENST00000455551 HAPLN2Q9GZV7 340 aa13.07□□□□□ -0.32
SEMA4D-213ENST00000455551 C17orf75Q9HAS0 396 aa13.07□□□□□ -0.32
SEMA4D-213ENST00000455551 PDLIM7Q9NR12 457 aa13.07□□□□□ -0.32
SEMA4D-213ENST00000455551 NSFP46459 744 aaKnown RBP13.06□□□□□ -0.32
SEMA4D-213ENST00000455551 STRN3Q13033 797 aa13.06□□□□□ -0.32
SEMA4D-213ENST00000455551 CALCOCO2Q13137 446 aa13.06□□□□□ -0.32
SEMA4D-213ENST00000455551 CYP1B1Q16678 543 aa13.06□□□□□ -0.32
SEMA4D-213ENST00000455551 XRRA1Q6P2D8 792 aa13.06□□□□□ -0.32
SEMA4D-213ENST00000455551 ABHD15Q6UXT9 468 aa13.06□□□□□ -0.32
SEMA4D-213ENST00000455551 SEPT14Q6ZU15 432 aa13.06□□□□□ -0.32
SEMA4D-213ENST00000455551 CEP89Q96ST8 783 aa13.06□□□□□ -0.32
SEMA4D-213ENST00000455551 DDX23Q9BUQ8 820 aaKnown RBP13.06□□□□□ -0.32
SEMA4D-213ENST00000455551 DDX20Q9UHI6 824 aaKnown RBP13.06□□□□□ -0.32
SEMA4D-213ENST00000455551 AGO2Q9UKV8 859 aaKnown RBP13.06□□□□□ -0.32
SEMA4D-213ENST00000455551 USTQ9Y2C2 406 aa13.06□□□□□ -0.32
SEMA4D-213ENST00000455551 MYPNQ86TC9 1320 aa13.06□□□□□ -0.32
SEMA4D-213ENST00000455551 EXTL3O43909 919 aa13.06□□□□□ -0.32
SEMA4D-213ENST00000455551 ACSL3O95573 720 aa13.06□□□□□ -0.32
SEMA4D-213ENST00000455551 UNGP13051 313 aaPredicted RBP13.06□□□□□ -0.32
SEMA4D-213ENST00000455551 CHN1P15882 459 aa13.06□□□□□ -0.32
SEMA4D-213ENST00000455551 NF2P35240 595 aa13.06□□□□□ -0.32
SEMA4D-213ENST00000455551 TMEM270Q6UE05 265 aa13.06□□□□□ -0.32
SEMA4D-213ENST00000455551 CCDC114Q96M63 670 aa13.06□□□□□ -0.32
SEMA4D-213ENST00000455551 TARS2Q9BW92 718 aaKnown RBP13.06□□□□□ -0.32
SEMA4D-213ENST00000455551 UMODL1Q5DID0 1318 aa13.06□□□□□ -0.32
SEMA4D-213ENST00000455551 H0YHG0 523 aa13.06□□□□□ -0.32
SEMA4D-213ENST00000455551 ATP2C2O75185 946 aa13.06□□□□□ -0.32
SEMA4D-213ENST00000455551 CNTN2Q02246 1040 aa13.06□□□□□ -0.32
SEMA4D-213ENST00000455551 ANGEL2Q5VTE6 544 aaKnown RBP13.06□□□□□ -0.32
SEMA4D-213ENST00000455551 DCAF15Q66K64 600 aa13.06□□□□□ -0.32
SEMA4D-213ENST00000455551 MIS18BP1Q6P0N0 1132 aa13.06□□□□□ -0.32
SEMA4D-213ENST00000455551 TEX13BQ9BXU2 312 aa13.06□□□□□ -0.32
SEMA4D-213ENST00000455551 ACAD9Q9H845 621 aa13.06□□□□□ -0.32
SEMA4D-213ENST00000455551 AS3MTQ9HBK9 375 aa13.06□□□□□ -0.32
SEMA4D-213ENST00000455551 PARP2Q9UGN5 583 aa13.06□□□□□ -0.32
SEMA4D-213ENST00000455551 R3HDM2Q9Y2K5 976 aaKnown RBP13.06□□□□□ -0.32
SEMA4D-213ENST00000455551 PCDHB4Q9Y5E5 795 aa13.06□□□□□ -0.32
SEMA4D-213ENST00000455551 ARID2Q68CP9 1835 aa13.05□□□□□ -0.32
SEMA4D-213ENST00000455551 RIPK2O43353 540 aa13.05□□□□□ -0.32
SEMA4D-213ENST00000455551 DKC1O60832 514 aaKnown RBP eCLIP13.05□□□□□ -0.32
SEMA4D-213ENST00000455551 SUPT20HL2P0C7V6 817 aa13.05□□□□□ -0.32
SEMA4D-213ENST00000455551 ATP4AP20648 1035 aa13.05□□□□□ -0.32
SEMA4D-213ENST00000455551 FNTAP49354 379 aa13.05□□□□□ -0.32
SEMA4D-213ENST00000455551 SUPT20HL1Q3ZLR7 823 aa13.05□□□□□ -0.32
SEMA4D-213ENST00000455551 CPLX4Q7Z7G2 160 aa13.05□□□□□ -0.32
SEMA4D-213ENST00000455551 DEPTORQ8TB45 409 aa13.05□□□□□ -0.32
SEMA4D-213ENST00000455551 ART4Q93070 314 aa13.05□□□□□ -0.32
SEMA4D-213ENST00000455551 APOBEC3GQ9HC16 384 aaKnown RBP13.05□□□□□ -0.32
SEMA4D-213ENST00000455551 RBAKQ9NYW8 714 aaPredicted RBP13.05□□□□□ -0.32
SEMA4D-213ENST00000455551 PCDHB2Q9Y5E7 798 aa13.05□□□□□ -0.32
SEMA4D-213ENST00000455551 ZNF541Q9H0D2 1346 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms