RNA–Protein interactions for RNA: ENST00000455343.5

RBM39-220, Transcript of RNA binding motif protein 39, humanhuman

TSL 5

Gene RBM39, Length 441 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-220ENST00000455343 NUP88Q99567 741 aaPredicted RBP4.4□□□□□ -1.71
RBM39-220ENST00000455343 SLF1Q9BQI6 1058 aa4.4□□□□□ -1.71
RBM39-220ENST00000455343 CRNKL1Q9BZJ0 848 aaKnown RBP4.4□□□□□ -1.71
RBM39-220ENST00000455343 CCDC8Q9H0W5 538 aaPredicted RBP4.4□□□□□ -1.71
RBM39-220ENST00000455343 GP6Q9HCN6 339 aa4.4□□□□□ -1.71
RBM39-220ENST00000455343 A1CFQ9NQ94 594 aaKnown RBP4.4□□□□□ -1.71
RBM39-220ENST00000455343 PDGFCQ9NRA1 345 aa4.4□□□□□ -1.71
RBM39-220ENST00000455343 METTL5Q9NRN9 209 aaKnown RBP4.4□□□□□ -1.71
RBM39-220ENST00000455343 ATP8A2Q9NTI2 1148 aa4.4□□□□□ -1.71
RBM39-220ENST00000455343 TRMT13Q9NUP7 481 aaKnown RBP4.4□□□□□ -1.71
RBM39-220ENST00000455343 NYAP2Q9P242 653 aa4.4□□□□□ -1.71
RBM39-220ENST00000455343 PRKAG3Q9UGI9 489 aa4.4□□□□□ -1.71
RBM39-220ENST00000455343 PCDHGB7Q9Y5F8 929 aa4.4□□□□□ -1.71
RBM39-220ENST00000455343 FHOD1Q9Y613 1164 aa4.4□□□□□ -1.71
RBM39-220ENST00000455343 CACNA1AO00555 2505 aa4.4□□□□□ -1.71
RBM39-220ENST00000455343 ZBED9Q6R2W3 1325 aa4.4□□□□□ -1.71
RBM39-220ENST00000455343 ZFHX4Q86UP3 3567 aa4.4□□□□□ -1.71
RBM39-220ENST00000455343 PLXNA1Q9UIW2 1896 aa4.39□□□□□ -1.71
RBM39-220ENST00000455343 MYO9BQ13459 2157 aa4.39□□□□□ -1.71
RBM39-220ENST00000455343 CYP2D7A0A087X1C5 515 aa4.39□□□□□ -1.71
RBM39-220ENST00000455343 IGKV6D-41A0A0C4DH26 115 aa4.39□□□□□ -1.71
RBM39-220ENST00000455343 LINC01553A4QN01 128 aa4.39□□□□□ -1.71
RBM39-220ENST00000455343 OTOL1A6NHN0 477 aaPredicted RBP4.39□□□□□ -1.71
RBM39-220ENST00000455343 ASB14A6NK59 587 aa4.39□□□□□ -1.71
RBM39-220ENST00000455343 PRKAB2O43741 272 aa4.39□□□□□ -1.71
RBM39-220ENST00000455343 FOXD2O60548 495 aaPredicted RBP4.39□□□□□ -1.71
RBM39-220ENST00000455343 ZBED4O75132 1171 aa4.39□□□□□ -1.71
RBM39-220ENST00000455343 SURF6O75683 361 aaKnown RBP4.39□□□□□ -1.71
RBM39-220ENST00000455343 CXCL10P02778 98 aa4.39□□□□□ -1.71
RBM39-220ENST00000455343 TRIM27P14373 513 aa4.39□□□□□ -1.71
RBM39-220ENST00000455343 GUCY2CP25092 1073 aa4.39□□□□□ -1.71
RBM39-220ENST00000455343 MAPKAPK2P49137 400 aa4.39□□□□□ -1.71
RBM39-220ENST00000455343 NCKAP1LP55160 1127 aa4.39□□□□□ -1.71
RBM39-220ENST00000455343 WDR5P61964 334 aaKnown RBP4.39□□□□□ -1.71
RBM39-220ENST00000455343 PURAQ00577 322 aaKnown RBP4.39□□□□□ -1.71
RBM39-220ENST00000455343 RBL2Q08999 1139 aa4.39□□□□□ -1.71
RBM39-220ENST00000455343 NR1I3Q14994 352 aa4.39□□□□□ -1.71
RBM39-220ENST00000455343 TTF1Q15361 905 aaPredicted RBP4.39□□□□□ -1.71
RBM39-220ENST00000455343 VMACQ2NL98 169 aa4.39□□□□□ -1.71
RBM39-220ENST00000455343 DUSP28Q4G0W2 176 aa4.39□□□□□ -1.71
RBM39-220ENST00000455343 HERC4Q5GLZ8 1057 aaPredicted RBP4.39□□□□□ -1.71
RBM39-220ENST00000455343 HLA-DQA1Q5Y7H0 255 aa4.39□□□□□ -1.71
RBM39-220ENST00000455343 NFRKBQ6P4R8 1299 aa4.39□□□□□ -1.71
RBM39-220ENST00000455343 ZC3H14Q6PJT7 736 aaKnown RBP4.39□□□□□ -1.71
RBM39-220ENST00000455343 UNC5AQ6ZN44 842 aa4.39□□□□□ -1.71
RBM39-220ENST00000455343 LSRQ86X29 649 aaPredicted RBP4.39□□□□□ -1.71
RBM39-220ENST00000455343 ADHFE1Q8IWW8 467 aa4.39□□□□□ -1.71
RBM39-220ENST00000455343 FAM9BQ8IZU0 186 aa4.39□□□□□ -1.71
RBM39-220ENST00000455343 CPXCR1Q8N123 301 aa4.39□□□□□ -1.71
RBM39-220ENST00000455343 PRSS33Q8NF86 280 aa4.39□□□□□ -1.71
RBM39-220ENST00000455343 CXorf38Q8TB03 319 aa4.39□□□□□ -1.71
RBM39-220ENST00000455343 FEZF2Q8TBJ5 459 aa4.39□□□□□ -1.71
RBM39-220ENST00000455343 GDPD5Q8WTR4 605 aa4.39□□□□□ -1.71
RBM39-220ENST00000455343 PPIL4Q8WUA2 492 aaKnown RBP eCLIP4.39□□□□□ -1.71
RBM39-220ENST00000455343 BRF1Q92994 677 aa4.39□□□□□ -1.71
RBM39-220ENST00000455343 TGS1Q96RS0 853 aaKnown RBP4.39□□□□□ -1.71
RBM39-220ENST00000455343 CTAGE1Q96RT6 745 aa4.39□□□□□ -1.71
RBM39-220ENST00000455343 RAD9AQ99638 391 aa4.39□□□□□ -1.71
RBM39-220ENST00000455343 BACH2Q9BYV9 841 aa4.39□□□□□ -1.71
RBM39-220ENST00000455343 AP5M1Q9H0R1 490 aa4.39□□□□□ -1.71
RBM39-220ENST00000455343 RAVER2Q9HCJ3 691 aaKnown RBP4.39□□□□□ -1.71
RBM39-220ENST00000455343 PPT2Q9UMR5 302 aa4.39□□□□□ -1.71
RBM39-220ENST00000455343 SYNPO2Q9UMS6 1093 aa4.39□□□□□ -1.71
RBM39-220ENST00000455343 TCF20Q9UGU0 1960 aaKnown RBP4.39□□□□□ -1.71
RBM39-220ENST00000455343 ZNF536O15090 1300 aa4.39□□□□□ -1.71
RBM39-220ENST00000455343 ZNF532Q9HCE3 1301 aa4.39□□□□□ -1.71
RBM39-220ENST00000455343 ADAMTS20P59510 1910 aa4.38□□□□□ -1.71
RBM39-220ENST00000455343 LRRC37A2A6NM11 1700 aa4.38□□□□□ -1.71
RBM39-220ENST00000455343 LOC102724159A0A0B4J2E5 919 aa4.38□□□□□ -1.71
RBM39-220ENST00000455343 ABHD14A-ACY1A0A1B0GW23 586 aa4.38□□□□□ -1.71
RBM39-220ENST00000455343 A0A1W2PQ27 194 aa4.38□□□□□ -1.71
RBM39-220ENST00000455343 A0A1W2PQ64 194 aa4.38□□□□□ -1.71
RBM39-220ENST00000455343 A0A1W2PQC6 194 aa4.38□□□□□ -1.71
RBM39-220ENST00000455343 A0A1W2PQD8 194 aa4.38□□□□□ -1.71
RBM39-220ENST00000455343 H3BQ06 376 aaPredicted RBP4.38□□□□□ -1.71
RBM39-220ENST00000455343 BUB1BO60566 1050 aaPredicted RBP4.38□□□□□ -1.71
RBM39-220ENST00000455343 DBHP09172 617 aa4.38□□□□□ -1.71
RBM39-220ENST00000455343 CD247P20963 164 aa4.38□□□□□ -1.71
RBM39-220ENST00000455343 IGFBP6P24592 240 aaPredicted RBP4.38□□□□□ -1.71
RBM39-220ENST00000455343 LTBRP36941 435 aa4.38□□□□□ -1.71
RBM39-220ENST00000455343 DEFB103AP81534 67 aa4.38□□□□□ -1.71
RBM39-220ENST00000455343 ZNF200P98182 395 aaPredicted RBP4.38□□□□□ -1.71
RBM39-220ENST00000455343 TCF15Q12870 199 aa4.38□□□□□ -1.71
RBM39-220ENST00000455343 BFSP2Q13515 415 aa4.38□□□□□ -1.71
RBM39-220ENST00000455343 PWP2Q15269 919 aaKnown RBP4.38□□□□□ -1.71
RBM39-220ENST00000455343 SMAD2Q15796 467 aaKnown RBP4.38□□□□□ -1.71
RBM39-220ENST00000455343 TCTN1Q2MV58 587 aa4.38□□□□□ -1.71
RBM39-220ENST00000455343 CTR9Q6PD62 1173 aa4.38□□□□□ -1.71
RBM39-220ENST00000455343 RUFY4Q6ZNE9 571 aa4.38□□□□□ -1.71
RBM39-220ENST00000455343 NOL8Q76FK4 1167 aaKnown RBP4.38□□□□□ -1.71
RBM39-220ENST00000455343 TMCO2Q7Z6W1 182 aaPredicted RBP4.38□□□□□ -1.71
RBM39-220ENST00000455343 SESTD1Q86VW0 696 aa4.38□□□□□ -1.71
RBM39-220ENST00000455343 JAMLQ86YT9 394 aa4.38□□□□□ -1.71
RBM39-220ENST00000455343 FBXO16Q8IX29 292 aaPredicted RBP4.38□□□□□ -1.71
RBM39-220ENST00000455343 RPAP2Q8IXW5 612 aaPredicted RBP4.38□□□□□ -1.71
RBM39-220ENST00000455343 FIBCD1Q8N539 461 aa4.38□□□□□ -1.71
RBM39-220ENST00000455343 LINC01356Q8N9X3 169 aa4.38□□□□□ -1.71
RBM39-220ENST00000455343 CAGE1Q8TC20 777 aa4.38□□□□□ -1.71
RBM39-220ENST00000455343 PABPC5Q96DU9 382 aaKnown RBP4.38□□□□□ -1.71
RBM39-220ENST00000455343 MRPL38Q96DV4 380 aaKnown RBP4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms