RNA–Protein interactions for RNA: ENST00000454542.5

HDAC4-205, Transcript of histone deacetylase 4, humanhuman

TSL 4

Gene HDAC4, Length 565 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-205ENST00000454542 MATR3P43243 847 aaKnown RBP eCLIP15.44■□□□□ 0.06
HDAC4-205ENST00000454542 PPP2R3AQ06190 1150 aa15.44■□□□□ 0.06
HDAC4-205ENST00000454542 DPYDQ12882 1025 aa15.44■□□□□ 0.06
HDAC4-205ENST00000454542 POSTNQ15063 836 aa15.44■□□□□ 0.06
HDAC4-205ENST00000454542 ZBTB6Q15916 424 aa15.44■□□□□ 0.06
HDAC4-205ENST00000454542 UPP1Q16831 310 aa15.44■□□□□ 0.06
HDAC4-205ENST00000454542 CD300LGQ6UXG3 332 aa15.44■□□□□ 0.06
HDAC4-205ENST00000454542 MRPL43Q8N983 215 aaKnown RBP15.44■□□□□ 0.06
HDAC4-205ENST00000454542 KIAA0895Q8NCT3 520 aa15.44■□□□□ 0.06
HDAC4-205ENST00000454542 C3orf58Q8NDZ4 430 aa15.44■□□□□ 0.06
HDAC4-205ENST00000454542 VN1R2Q8NFZ6 395 aa15.44■□□□□ 0.06
HDAC4-205ENST00000454542 HLA-CQ95604 372 aa15.44■□□□□ 0.06
HDAC4-205ENST00000454542 TSPAN18Q96SJ8 248 aa15.44■□□□□ 0.06
HDAC4-205ENST00000454542 COLEC11Q9BWP8 271 aa15.44■□□□□ 0.06
HDAC4-205ENST00000454542 GOLGA2P5Q9HBQ8 144 aa15.44■□□□□ 0.06
HDAC4-205ENST00000454542 CHST7Q9NS84 486 aa15.44■□□□□ 0.06
HDAC4-205ENST00000454542 AGO2Q9UKV8 859 aaKnown RBP15.44■□□□□ 0.06
HDAC4-205ENST00000454542 TSC2P49815 1807 aa15.44■□□□□ 0.06
HDAC4-205ENST00000454542 SF3B1O75533 1304 aaKnown RBP eCLIP15.43■□□□□ 0.06
HDAC4-205ENST00000454542 TGFB1I1O43294 461 aa15.43■□□□□ 0.06
HDAC4-205ENST00000454542 NRIP1P48552 1158 aa15.43■□□□□ 0.06
HDAC4-205ENST00000454542 DSG1Q02413 1049 aa15.43■□□□□ 0.06
HDAC4-205ENST00000454542 FAM160A1Q05DH4 1040 aa15.43■□□□□ 0.06
HDAC4-205ENST00000454542 ADAM15Q13444 863 aa15.43■□□□□ 0.06
HDAC4-205ENST00000454542 SKIV2LQ15477 1246 aaKnown RBP15.43■□□□□ 0.06
HDAC4-205ENST00000454542 KMT5BQ4FZB7 885 aa15.43■□□□□ 0.06
HDAC4-205ENST00000454542 TMEM184AQ6ZMB5 413 aa15.43■□□□□ 0.06
HDAC4-205ENST00000454542 TMC7Q7Z402 723 aa15.43■□□□□ 0.06
HDAC4-205ENST00000454542 CD302Q8IX05 232 aa15.43■□□□□ 0.06
HDAC4-205ENST00000454542 POMGNT1Q8WZA1 660 aa15.43■□□□□ 0.06
HDAC4-205ENST00000454542 CBWD1Q9BRT8 395 aa15.43■□□□□ 0.06
HDAC4-205ENST00000454542 GPR62Q9BZJ7 368 aa15.43■□□□□ 0.06
HDAC4-205ENST00000454542 RPF1Q9H9Y2 349 aaKnown RBP15.43■□□□□ 0.06
HDAC4-205ENST00000454542 PLXNA3P51805 1871 aa15.42■□□□□ 0.06
HDAC4-205ENST00000454542 VCANP13611 3396 aa15.42■□□□□ 0.06
HDAC4-205ENST00000454542 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP15.42■□□□□ 0.06
HDAC4-205ENST00000454542 KIAA0391O15091 583 aaKnown RBP15.42■□□□□ 0.06
HDAC4-205ENST00000454542 LINC01565O15544 149 aa15.42■□□□□ 0.06
HDAC4-205ENST00000454542 RHOBTB3O94955 611 aa15.42■□□□□ 0.06
HDAC4-205ENST00000454542 CYP3A5P20815 502 aa15.42■□□□□ 0.06
HDAC4-205ENST00000454542 LRPAP1P30533 357 aa15.42■□□□□ 0.06
HDAC4-205ENST00000454542 CLCNKBP51801 687 aa15.42■□□□□ 0.06
HDAC4-205ENST00000454542 SNRPFP62306 86 aaKnown RBP15.42■□□□□ 0.06
HDAC4-205ENST00000454542 TFF2Q03403 129 aa15.42■□□□□ 0.06
HDAC4-205ENST00000454542 LEXMQ3ZCV2 418 aa15.42■□□□□ 0.06
HDAC4-205ENST00000454542 KIAA0319Q5VV43 1072 aa15.42■□□□□ 0.06
HDAC4-205ENST00000454542 BRSK2Q8IWQ3 736 aa15.42■□□□□ 0.06
HDAC4-205ENST00000454542 ZSWIM2Q8NEG5 633 aa15.42■□□□□ 0.06
HDAC4-205ENST00000454542 AUTS2Q8WXX7 1259 aa15.42■□□□□ 0.06
HDAC4-205ENST00000454542 C18orf25Q96B23 403 aaPredicted RBP15.42■□□□□ 0.06
HDAC4-205ENST00000454542 MSLNLQ96KJ4 702 aa15.42■□□□□ 0.06
HDAC4-205ENST00000454542 TIGD1Q96MW7 591 aa15.42■□□□□ 0.06
HDAC4-205ENST00000454542 TLE6Q9H808 572 aa15.42■□□□□ 0.06
HDAC4-205ENST00000454542 RXFP1Q9HBX9 757 aa15.42■□□□□ 0.06
HDAC4-205ENST00000454542 EXOC1Q9NV70 894 aa15.42■□□□□ 0.06
HDAC4-205ENST00000454542 TUBGCP4Q9UGJ1 667 aa15.42■□□□□ 0.06
HDAC4-205ENST00000454542 DERAQ9Y315 318 aa15.42■□□□□ 0.06
HDAC4-205ENST00000454542 C2CD2Q9Y426 696 aa15.42■□□□□ 0.06
HDAC4-205ENST00000454542 LACTBL1A8MY62 500 aa15.41■□□□□ 0.06
HDAC4-205ENST00000454542 PODXLO00592 558 aa15.41■□□□□ 0.06
HDAC4-205ENST00000454542 RPN1P04843 607 aaKnown RBP15.41■□□□□ 0.06
HDAC4-205ENST00000454542 URODP06132 367 aa15.41■□□□□ 0.06
HDAC4-205ENST00000454542 IGFBP6P24592 240 aaPredicted RBP15.41■□□□□ 0.06
HDAC4-205ENST00000454542 RPL9P32969 192 aaKnown RBP15.41■□□□□ 0.06
HDAC4-205ENST00000454542 GLUD2P49448 558 aa15.41■□□□□ 0.06
HDAC4-205ENST00000454542 ACOT2P49753 483 aa15.41■□□□□ 0.06
HDAC4-205ENST00000454542 DLX2Q07687 328 aaPredicted RBP15.41■□□□□ 0.06
HDAC4-205ENST00000454542 ELAVL2Q12926 359 aaKnown RBP15.41■□□□□ 0.06
HDAC4-205ENST00000454542 STK4Q13043 487 aa15.41■□□□□ 0.06
HDAC4-205ENST00000454542 PSMD2Q13200 908 aa15.41■□□□□ 0.06
HDAC4-205ENST00000454542 BMS1Q14692 1282 aaKnown RBP15.41■□□□□ 0.06
HDAC4-205ENST00000454542 KCNB1Q14721 858 aa15.41■□□□□ 0.06
HDAC4-205ENST00000454542 KANK3Q6NY19 840 aa15.41■□□□□ 0.06
HDAC4-205ENST00000454542 DCLRE1AQ6PJP8 1040 aa15.41■□□□□ 0.06
HDAC4-205ENST00000454542 TAS1R1Q7RTX1 841 aa15.41■□□□□ 0.06
HDAC4-205ENST00000454542 C12orf56Q8IXR9 622 aa15.41■□□□□ 0.06
HDAC4-205ENST00000454542 SYCP3Q8IZU3 236 aa15.41■□□□□ 0.06
HDAC4-205ENST00000454542 MICAL1Q8TDZ2 1067 aa15.41■□□□□ 0.06
HDAC4-205ENST00000454542 TMEM174Q8WUU8 243 aa15.41■□□□□ 0.06
HDAC4-205ENST00000454542 RABGGTAQ92696 567 aa15.41■□□□□ 0.06
HDAC4-205ENST00000454542 DDX27Q96GQ7 796 aaKnown RBP15.41■□□□□ 0.06
HDAC4-205ENST00000454542 FBXL18Q96ME1 805 aa15.41■□□□□ 0.06
HDAC4-205ENST00000454542 ASB2Q96Q27 587 aa15.41■□□□□ 0.06
HDAC4-205ENST00000454542 ASB7Q9H672 318 aa15.41■□□□□ 0.06
HDAC4-205ENST00000454542 SLC39A2Q9NP94 309 aa15.41■□□□□ 0.06
HDAC4-205ENST00000454542 AGPAT3Q9NRZ7 376 aa15.41■□□□□ 0.06
HDAC4-205ENST00000454542 CLDND1Q9NY35 253 aa15.41■□□□□ 0.06
HDAC4-205ENST00000454542 CLEC1BQ9P126 229 aa15.41■□□□□ 0.06
HDAC4-205ENST00000454542 UBQLN1Q9UMX0 589 aaKnown RBP15.41■□□□□ 0.06
HDAC4-205ENST00000454542 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.4■□□□□ 0.06
HDAC4-205ENST00000454542 PER2O15055 1255 aa15.4■□□□□ 0.06
HDAC4-205ENST00000454542 EXTL3O43909 919 aa15.4■□□□□ 0.06
HDAC4-205ENST00000454542 CLASP2O75122 1294 aaKnown RBP15.4■□□□□ 0.06
HDAC4-205ENST00000454542 LDHAP00338 332 aaKnown RBP15.4■□□□□ 0.06
HDAC4-205ENST00000454542 NFICP08651 508 aa15.4■□□□□ 0.06
HDAC4-205ENST00000454542 KCNA5P22460 613 aa15.4■□□□□ 0.06
HDAC4-205ENST00000454542 AARSP49588 968 aaKnown RBP eCLIP15.4■□□□□ 0.06
HDAC4-205ENST00000454542 WNT7BP56706 349 aa15.4■□□□□ 0.06
HDAC4-205ENST00000454542 MRPS5P82675 430 aaKnown RBP15.4■□□□□ 0.06
HDAC4-205ENST00000454542 USP41Q3LFD5 358 aa15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms