RNA–Protein interactions for RNA: ENST00000454233.6

DDX39A-203, Transcript of DExD-box helicase 39A, humanhuman

TSL 3 BASIC

Gene DDX39A, Length 922 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-203ENST00000454233 TGM5O43548 720 aa11.67□□□□□ -0.54
DDX39A-203ENST00000454233 SPATA31D3P0C874 917 aa11.67□□□□□ -0.54
DDX39A-203ENST00000454233 MYBP10242 640 aa11.67□□□□□ -0.54
DDX39A-203ENST00000454233 PDIA4P13667 645 aaKnown RBP11.67□□□□□ -0.54
DDX39A-203ENST00000454233 KCNE1P15382 129 aa11.67□□□□□ -0.54
DDX39A-203ENST00000454233 CLCNKBP51801 687 aa11.67□□□□□ -0.54
DDX39A-203ENST00000454233 MCL1Q07820 350 aa11.67□□□□□ -0.54
DDX39A-203ENST00000454233 SLC39A14Q15043 492 aa11.67□□□□□ -0.54
DDX39A-203ENST00000454233 STK38Q15208 465 aa11.67□□□□□ -0.54
DDX39A-203ENST00000454233 KYAT1Q16773 422 aa11.67□□□□□ -0.54
DDX39A-203ENST00000454233 PTPN21Q16825 1174 aa11.67□□□□□ -0.54
DDX39A-203ENST00000454233 UPP1Q16831 310 aa11.67□□□□□ -0.54
DDX39A-203ENST00000454233 TRIM67Q6ZTA4 783 aa11.67□□□□□ -0.54
DDX39A-203ENST00000454233 SPATA31D4Q6ZUB0 917 aa11.67□□□□□ -0.54
DDX39A-203ENST00000454233 USP49Q70CQ1 688 aa11.67□□□□□ -0.54
DDX39A-203ENST00000454233 OTOP3Q7RTS5 596 aa11.67□□□□□ -0.54
DDX39A-203ENST00000454233 ZDHHC14Q8IZN3 488 aa11.67□□□□□ -0.54
DDX39A-203ENST00000454233 KREMEN2Q8NCW0 462 aa11.67□□□□□ -0.54
DDX39A-203ENST00000454233 SMG7Q92540 1137 aaKnown RBP11.67□□□□□ -0.54
DDX39A-203ENST00000454233 KCNN1Q92952 543 aa11.67□□□□□ -0.54
DDX39A-203ENST00000454233 CLIC6Q96NY7 704 aa11.67□□□□□ -0.54
DDX39A-203ENST00000454233 USP28Q96RU2 1077 aa11.67□□□□□ -0.54
DDX39A-203ENST00000454233 RHOBTB2Q9BYZ6 727 aa11.67□□□□□ -0.54
DDX39A-203ENST00000454233 PIDD1Q9HB75 910 aa11.67□□□□□ -0.54
DDX39A-203ENST00000454233 GOLGA2P5Q9HBQ8 144 aa11.67□□□□□ -0.54
DDX39A-203ENST00000454233 ZDHHC7Q9NXF8 308 aa11.67□□□□□ -0.54
DDX39A-203ENST00000454233 CNTN3Q9P232 1028 aa11.67□□□□□ -0.54
DDX39A-203ENST00000454233 TBX20Q9UMR3 447 aa11.67□□□□□ -0.54
DDX39A-203ENST00000454233 GTF3C3Q9Y5Q9 886 aa11.67□□□□□ -0.54
DDX39A-203ENST00000454233 MORC2Q9Y6X9 1032 aaPredicted RBP11.67□□□□□ -0.54
DDX39A-203ENST00000454233 TRIP11Q15643 1979 aa11.67□□□□□ -0.54
DDX39A-203ENST00000454233 CITO14578 2027 aa11.66□□□□□ -0.54
DDX39A-203ENST00000454233 PODXLO00592 558 aa11.66□□□□□ -0.54
DDX39A-203ENST00000454233 CLTAP09496 248 aa11.66□□□□□ -0.54
DDX39A-203ENST00000454233 FGFR3P22607 806 aa11.66□□□□□ -0.54
DDX39A-203ENST00000454233 RPL9P32969 192 aaKnown RBP11.66□□□□□ -0.54
DDX39A-203ENST00000454233 SOX4Q06945 474 aaPredicted RBP11.66□□□□□ -0.54
DDX39A-203ENST00000454233 SIGLEC14Q08ET2 396 aa11.66□□□□□ -0.54
DDX39A-203ENST00000454233 SLC10A6Q3KNW5 377 aa11.66□□□□□ -0.54
DDX39A-203ENST00000454233 SEZ6Q53EL9 994 aa11.66□□□□□ -0.54
DDX39A-203ENST00000454233 LIN9Q5TKA1 542 aa11.66□□□□□ -0.54
DDX39A-203ENST00000454233 LILRA6Q6PI73 481 aa11.66□□□□□ -0.54
DDX39A-203ENST00000454233 CCDC73Q6ZRK6 1079 aa11.66□□□□□ -0.54
DDX39A-203ENST00000454233 ANKS3Q6ZW76 656 aa11.66□□□□□ -0.54
DDX39A-203ENST00000454233 SV2BQ7L1I2 683 aa11.66□□□□□ -0.54
DDX39A-203ENST00000454233 DYMQ7RTS9 669 aa11.66□□□□□ -0.54
DDX39A-203ENST00000454233 LNX1Q8TBB1 728 aaPredicted RBP11.66□□□□□ -0.54
DDX39A-203ENST00000454233 STAMQ92783 540 aa11.66□□□□□ -0.54
DDX39A-203ENST00000454233 MFSD14AQ96MC6 490 aa11.66□□□□□ -0.54
DDX39A-203ENST00000454233 ZNF396Q96N95 335 aaPredicted RBP11.66□□□□□ -0.54
DDX39A-203ENST00000454233 ZMAT2Q96NC0 199 aaKnown RBP11.66□□□□□ -0.54
DDX39A-203ENST00000454233 CLSTN3Q9BQT9 956 aa11.66□□□□□ -0.54
DDX39A-203ENST00000454233 PLEKHA5Q9HAU0 1116 aa11.66□□□□□ -0.54
DDX39A-203ENST00000454233 SORCS3Q9UPU3 1222 aa11.66□□□□□ -0.54
DDX39A-203ENST00000454233 NUB1Q9Y5A7 615 aa11.66□□□□□ -0.54
DDX39A-203ENST00000454233 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.66□□□□□ -0.54
DDX39A-203ENST00000454233 PLXNA3P51805 1871 aa11.66□□□□□ -0.54
DDX39A-203ENST00000454233 TMEM221A6NGB7 291 aa11.65□□□□□ -0.54
DDX39A-203ENST00000454233 M0R296 226 aa11.65□□□□□ -0.54
DDX39A-203ENST00000454233 OGTO15294 1046 aa11.65□□□□□ -0.54
DDX39A-203ENST00000454233 RFPL2O75678 378 aa11.65□□□□□ -0.54
DDX39A-203ENST00000454233 ZMYND10O75800 440 aa11.65□□□□□ -0.54
DDX39A-203ENST00000454233 PIGRP01833 764 aa11.65□□□□□ -0.54
DDX39A-203ENST00000454233 CXCL8P10145 99 aa11.65□□□□□ -0.54
DDX39A-203ENST00000454233 NMT1P30419 496 aaKnown RBP11.65□□□□□ -0.54
DDX39A-203ENST00000454233 STAT6P42226 847 aa11.65□□□□□ -0.54
DDX39A-203ENST00000454233 BRCC3P46736 316 aa11.65□□□□□ -0.54
DDX39A-203ENST00000454233 NASPP49321 788 aaPredicted RBP11.65□□□□□ -0.54
DDX39A-203ENST00000454233 MTMR3Q13615 1198 aa11.65□□□□□ -0.54
DDX39A-203ENST00000454233 HFE2Q6ZVN8 426 aa11.65□□□□□ -0.54
DDX39A-203ENST00000454233 DDX12PQ92771 950 aa11.65□□□□□ -0.54
DDX39A-203ENST00000454233 PBXIP1Q96AQ6 731 aa11.65□□□□□ -0.54
DDX39A-203ENST00000454233 C18orf25Q96B23 403 aaPredicted RBP11.65□□□□□ -0.54
DDX39A-203ENST00000454233 PRKD2Q9BZL6 878 aa11.65□□□□□ -0.54
DDX39A-203ENST00000454233 MTRRQ9UBK8 725 aa11.65□□□□□ -0.54
DDX39A-203ENST00000454233 LIMD1Q9UGP4 676 aa11.65□□□□□ -0.54
DDX39A-203ENST00000454233 FBXW11Q9UKB1 542 aa11.65□□□□□ -0.54
DDX39A-203ENST00000454233 ARIH1Q9Y4X5 557 aaPredicted RBP11.65□□□□□ -0.54
DDX39A-203ENST00000454233 CLUHO75153 1309 aa11.64□□□□□ -0.55
DDX39A-203ENST00000454233 C5orf42Q9H799 3197 aa11.64□□□□□ -0.55
DDX39A-203ENST00000454233 I3L4J1 428 aa11.64□□□□□ -0.55
DDX39A-203ENST00000454233 SPTLC2O15270 562 aa11.64□□□□□ -0.55
DDX39A-203ENST00000454233 XPOTO43592 962 aaKnown RBP11.64□□□□□ -0.55
DDX39A-203ENST00000454233 GAP43P17677 238 aa11.64□□□□□ -0.55
DDX39A-203ENST00000454233 TKTP29401 623 aaKnown RBP11.64□□□□□ -0.55
DDX39A-203ENST00000454233 GBP2P32456 591 aaPredicted RBP11.64□□□□□ -0.55
DDX39A-203ENST00000454233 MCM4P33991 863 aa11.64□□□□□ -0.55
DDX39A-203ENST00000454233 OR1D2P34982 312 aa11.64□□□□□ -0.55
DDX39A-203ENST00000454233 GTF2BQ00403 316 aa11.64□□□□□ -0.55
DDX39A-203ENST00000454233 PPP2R3AQ06190 1150 aa11.64□□□□□ -0.55
DDX39A-203ENST00000454233 RAB33AQ14088 237 aa11.64□□□□□ -0.55
DDX39A-203ENST00000454233 PPM1LQ5SGD2 360 aa11.64□□□□□ -0.55
DDX39A-203ENST00000454233 CD300LGQ6UXG3 332 aa11.64□□□□□ -0.55
DDX39A-203ENST00000454233 BMP8AQ7Z5Y6 402 aa11.64□□□□□ -0.55
DDX39A-203ENST00000454233 SFR1Q86XK3 245 aa11.64□□□□□ -0.55
DDX39A-203ENST00000454233 MAP4K3Q8IVH8 894 aa11.64□□□□□ -0.55
DDX39A-203ENST00000454233 SUGP1Q8IWZ8 645 aaKnown RBP11.64□□□□□ -0.55
DDX39A-203ENST00000454233 UBALD2Q8IYN6 164 aa11.64□□□□□ -0.55
DDX39A-203ENST00000454233 LINC00301Q8NCQ3 95 aa11.64□□□□□ -0.55
DDX39A-203ENST00000454233 C3orf58Q8NDZ4 430 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms