RNA–Protein interactions for RNA: ENST00000453963.5

SEC16A-207, Transcript of SEC16 homolog A, endoplasmic reticulum export factor, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene SEC16A, Length 4,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC16A-207ENST00000453963 ENO1P06733 434 aaKnown RBP12.71□□□□□ -0.38
SEC16A-207ENST00000453963 HNRNPCP07910 306 aaKnown RBP eCLIP12.71□□□□□ -0.382e-6■■■■□ 20.1
SEC16A-207ENST00000453963 NMT1P30419 496 aaKnown RBP12.71□□□□□ -0.38
SEC16A-207ENST00000453963 CIITAP33076 1130 aa12.71□□□□□ -0.38
SEC16A-207ENST00000453963 YWHAHQ04917 246 aaPredicted RBP12.71□□□□□ -0.38
SEC16A-207ENST00000453963 GRIN1Q05586 938 aa12.71□□□□□ -0.38
SEC16A-207ENST00000453963 PRR5LQ6MZQ0 368 aa12.71□□□□□ -0.38
SEC16A-207ENST00000453963 KIF2BQ8N4N8 673 aa12.71□□□□□ -0.38
SEC16A-207ENST00000453963 CCNYL1Q8N7R7 359 aa12.71□□□□□ -0.38
SEC16A-207ENST00000453963 MTBPQ96DY7 904 aa12.71□□□□□ -0.38
SEC16A-207ENST00000453963 KCNK16Q96T55 309 aa12.71□□□□□ -0.38
SEC16A-207ENST00000453963 MAP3K14Q99558 947 aa12.71□□□□□ -0.38
SEC16A-207ENST00000453963 CD248Q9HCU0 757 aa12.71□□□□□ -0.38
SEC16A-207ENST00000453963 GEMIN8Q9NWZ8 242 aaKnown RBP12.71□□□□□ -0.38
SEC16A-207ENST00000453963 ALG6Q9Y672 507 aa12.71□□□□□ -0.38
SEC16A-207ENST00000453963 ABCA6Q8N139 1617 aa12.71□□□□□ -0.38
SEC16A-207ENST00000453963 ZNF189O75820 626 aaPredicted RBP12.71□□□□□ -0.38
SEC16A-207ENST00000453963 AKR1B1P15121 316 aa12.71□□□□□ -0.38
SEC16A-207ENST00000453963 ZFXP17010 805 aaPredicted RBP12.71□□□□□ -0.38
SEC16A-207ENST00000453963 PSMC5P62195 406 aa12.71□□□□□ -0.38
SEC16A-207ENST00000453963 CNGA3Q16281 694 aa12.71□□□□□ -0.38
SEC16A-207ENST00000453963 SMIM5Q71RC9 77 aa12.71□□□□□ -0.38
SEC16A-207ENST00000453963 ARL8AQ96BM9 186 aa12.71□□□□□ -0.38
SEC16A-207ENST00000453963 MKNK1Q9BUB5 465 aa12.71□□□□□ -0.38
SEC16A-207ENST00000453963 SPATA31A6Q5VVP1 1343 aa12.7□□□□□ -0.38
SEC16A-207ENST00000453963 SLC9A1P19634 815 aa12.7□□□□□ -0.38
SEC16A-207ENST00000453963 CHRNA5P30532 468 aa12.7□□□□□ -0.38
SEC16A-207ENST00000453963 KLK7P49862 253 aa12.7□□□□□ -0.38
SEC16A-207ENST00000453963 TNFAIP2Q03169 654 aa12.7□□□□□ -0.38
SEC16A-207ENST00000453963 KYNUQ16719 465 aa12.7□□□□□ -0.38
SEC16A-207ENST00000453963 TIPINQ9BVW5 301 aa12.7□□□□□ -0.38
SEC16A-207ENST00000453963 CELF4Q9BZC1 486 aaKnown RBP12.7□□□□□ -0.38
SEC16A-207ENST00000453963 SYCE1LA8MT33 242 aa12.7□□□□□ -0.38
SEC16A-207ENST00000453963 CAMTA2O94983 1202 aa12.7□□□□□ -0.38
SEC16A-207ENST00000453963 HDAC4P56524 1084 aa12.7□□□□□ -0.38
SEC16A-207ENST00000453963 ANKZF1Q9H8Y5 726 aa12.7□□□□□ -0.38
SEC16A-207ENST00000453963 TMBIM4Q9HC24 238 aa12.7□□□□□ -0.38
SEC16A-207ENST00000453963 ALG13Q9NP73 1137 aaKnown RBP12.7□□□□□ -0.38
SEC16A-207ENST00000453963 KIAA0391O15091 583 aaKnown RBP12.7□□□□□ -0.38
SEC16A-207ENST00000453963 ACADSP16219 412 aa12.7□□□□□ -0.38
SEC16A-207ENST00000453963 KLHDC7AQ5VTJ3 777 aa12.7□□□□□ -0.38
SEC16A-207ENST00000453963 ANKMY2Q8IV38 441 aa12.7□□□□□ -0.38
SEC16A-207ENST00000453963 LRRC34Q8IZ02 419 aa12.7□□□□□ -0.38
SEC16A-207ENST00000453963 NDUFAF2Q8N183 169 aa12.7□□□□□ -0.38
SEC16A-207ENST00000453963 C4orf33Q8N1A6 199 aa12.7□□□□□ -0.38
SEC16A-207ENST00000453963 KCTD17Q8N5Z5 321 aa12.7□□□□□ -0.38
SEC16A-207ENST00000453963 CERKQ8TCT0 537 aa12.7□□□□□ -0.38
SEC16A-207ENST00000453963 LMTK2Q8IWU2 1503 aa12.69□□□□□ -0.38
SEC16A-207ENST00000453963 PIK3R2O00459 728 aa12.69□□□□□ -0.38
SEC16A-207ENST00000453963 E2F6O75461 281 aa12.69□□□□□ -0.38
SEC16A-207ENST00000453963 SPAG6O75602 509 aa12.69□□□□□ -0.38
SEC16A-207ENST00000453963 VHLP40337 213 aa12.69□□□□□ -0.38
SEC16A-207ENST00000453963 MAGEA4P43358 317 aa12.69□□□□□ -0.38
SEC16A-207ENST00000453963 RFX5P48382 616 aaPredicted RBP12.69□□□□□ -0.38
SEC16A-207ENST00000453963 RAPGEF5Q92565 580 aa12.69□□□□□ -0.38
SEC16A-207ENST00000453963 SPATA31A1Q5TZJ5 1347 aa12.69□□□□□ -0.38
SEC16A-207ENST00000453963 PCYT1AP49585 367 aa12.69□□□□□ -0.38
SEC16A-207ENST00000453963 EIF3EP60228 445 aaKnown RBP12.69□□□□□ -0.38
SEC16A-207ENST00000453963 STX3Q13277 289 aa12.69□□□□□ -0.38
SEC16A-207ENST00000453963 TTC8Q8TAM2 541 aa12.69□□□□□ -0.38
SEC16A-207ENST00000453963 CAVIN3Q969G5 261 aa12.69□□□□□ -0.38
SEC16A-207ENST00000453963 LMCD1Q9NZU5 365 aa12.69□□□□□ -0.38
SEC16A-207ENST00000453963 KCND2Q9NZV8 630 aa12.69□□□□□ -0.38
SEC16A-207ENST00000453963 ZNRF3Q9ULT6 936 aa12.69□□□□□ -0.38
SEC16A-207ENST00000453963 CNTNAP5Q8WYK1 1306 aa12.69□□□□□ -0.38
SEC16A-207ENST00000453963 ABCA9Q8IUA7 1624 aa12.69□□□□□ -0.38
SEC16A-207ENST00000453963 MAN1A2O60476 641 aa12.69□□□□□ -0.38
SEC16A-207ENST00000453963 KLHL2O95198 593 aa12.69□□□□□ -0.38
SEC16A-207ENST00000453963 COMTP21964 271 aa12.69□□□□□ -0.38
SEC16A-207ENST00000453963 SCTRP47872 440 aa12.69□□□□□ -0.38
SEC16A-207ENST00000453963 FNTAP49354 379 aa12.69□□□□□ -0.38
SEC16A-207ENST00000453963 ALDH18A1P54886 795 aaKnown RBP12.69□□□□□ -0.38
SEC16A-207ENST00000453963 CDH6P55285 790 aa12.69□□□□□ -0.38
SEC16A-207ENST00000453963 STRIP1Q5VSL9 837 aa12.69□□□□□ -0.38
SEC16A-207ENST00000453963 TFR2Q9UP52 801 aa12.69□□□□□ -0.38
SEC16A-207ENST00000453963 GOLGA8RI6L899 631 aa12.69□□□□□ -0.38
SEC16A-207ENST00000453963 DNAJC6O75061 913 aa12.69□□□□□ -0.38
SEC16A-207ENST00000453963 CSF1RP07333 972 aa12.69□□□□□ -0.38
SEC16A-207ENST00000453963 SERPINB9P50453 376 aa12.69□□□□□ -0.38
SEC16A-207ENST00000453963 GPC3P51654 580 aa12.69□□□□□ -0.38
SEC16A-207ENST00000453963 CENPCQ03188 943 aa12.69□□□□□ -0.38
SEC16A-207ENST00000453963 CDKAL1Q5VV42 579 aa12.69□□□□□ -0.38
SEC16A-207ENST00000453963 TPCN2Q8NHX9 752 aa12.69□□□□□ -0.38
SEC16A-207ENST00000453963 MDM1Q8TC05 714 aa12.69□□□□□ -0.38
SEC16A-207ENST00000453963 PSPC1Q8WXF1 523 aaKnown RBP12.69□□□□□ -0.38
SEC16A-207ENST00000453963 REEP2Q9BRK0 252 aa12.69□□□□□ -0.38
SEC16A-207ENST00000453963 SENP2Q9HC62 589 aa12.69□□□□□ -0.38
SEC16A-207ENST00000453963 EPB41L4AQ9HCS5 686 aaPredicted RBP12.69□□□□□ -0.38
SEC16A-207ENST00000453963 NPHP3-ACAD11A0A0J9YXS1 232 aa12.68□□□□□ -0.38
SEC16A-207ENST00000453963 NQO1P15559 274 aaKnown RBP12.68□□□□□ -0.38
SEC16A-207ENST00000453963 CD44P16070 742 aaKnown RBP12.68□□□□□ -0.38
SEC16A-207ENST00000453963 IL10P22301 178 aa12.68□□□□□ -0.38
SEC16A-207ENST00000453963 FXR2P51116 673 aaKnown RBP eCLIP12.68□□□□□ -0.389e-7■■■□□ 18.2
SEC16A-207ENST00000453963 POTEAQ6S8J7 498 aa12.68□□□□□ -0.38
SEC16A-207ENST00000453963 OTUD5Q96G74 571 aa12.68□□□□□ -0.38
SEC16A-207ENST00000453963 PDP2Q9P2J9 529 aa12.68□□□□□ -0.38
SEC16A-207ENST00000453963 DAGLAQ9Y4D2 1042 aa12.68□□□□□ -0.38
SEC16A-207ENST00000453963 P4HA2O15460 535 aa12.68□□□□□ -0.38
SEC16A-207ENST00000453963 AARSP49588 968 aaKnown RBP eCLIP12.68□□□□□ -0.38
SEC16A-207ENST00000453963 NKX1-1Q15270 411 aaPredicted RBP12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms