RNA–Protein interactions for RNA: ENST00000452668.1

CHKB-CPT1B-201, Transcript of CHKB-CPT1B readthrough (NMD candidate), humanhuman

TSL 4

Gene CHKB-CPT1B, Length 546 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1B-201ENST00000452668 CDK5RAP3Q96JB5 506 aa13.04□□□□□ -0.32
CHKB-CPT1B-201ENST00000452668 ACAP3Q96P50 834 aa13.04□□□□□ -0.32
CHKB-CPT1B-201ENST00000452668 BCO2Q9BYV7 579 aa13.04□□□□□ -0.32
CHKB-CPT1B-201ENST00000452668 MTRRQ9UBK8 725 aa13.04□□□□□ -0.32
CHKB-CPT1B-201ENST00000452668 KCNH3Q9ULD8 1083 aa13.04□□□□□ -0.32
CHKB-CPT1B-201ENST00000452668 USP20Q9Y2K6 914 aa13.04□□□□□ -0.32
CHKB-CPT1B-201ENST00000452668 PLXNA3P51805 1871 aa13.04□□□□□ -0.32
CHKB-CPT1B-201ENST00000452668 C2orf16Q68DN1 1984 aa13.03□□□□□ -0.32
CHKB-CPT1B-201ENST00000452668 NCAM2O15394 837 aa13.03□□□□□ -0.32
CHKB-CPT1B-201ENST00000452668 DCNP07585 359 aaKnown RBP13.03□□□□□ -0.32
CHKB-CPT1B-201ENST00000452668 POU2F2P09086 479 aa13.03□□□□□ -0.32
CHKB-CPT1B-201ENST00000452668 FGFR3P22607 806 aa13.03□□□□□ -0.32
CHKB-CPT1B-201ENST00000452668 GRM5P41594 1212 aa13.03□□□□□ -0.32
CHKB-CPT1B-201ENST00000452668 ARPP19P56211 112 aa13.03□□□□□ -0.32
CHKB-CPT1B-201ENST00000452668 NTHL1P78549 312 aa13.03□□□□□ -0.32
CHKB-CPT1B-201ENST00000452668 PRKCQQ04759 706 aa13.03□□□□□ -0.32
CHKB-CPT1B-201ENST00000452668 PTGDRQ13258 359 aa13.03□□□□□ -0.32
CHKB-CPT1B-201ENST00000452668 ZRSR1Q15695 479 aaKnown RBP13.03□□□□□ -0.32
CHKB-CPT1B-201ENST00000452668 NT5DC1Q5TFE4 455 aa13.03□□□□□ -0.32
CHKB-CPT1B-201ENST00000452668 SNX27Q96L92 541 aa13.03□□□□□ -0.32
CHKB-CPT1B-201ENST00000452668 PPP1R10Q96QC0 940 aaKnown RBP13.03□□□□□ -0.32
CHKB-CPT1B-201ENST00000452668 TIPINQ9BVW5 301 aa13.03□□□□□ -0.32
CHKB-CPT1B-201ENST00000452668 TMEM134Q9H6X4 195 aa13.03□□□□□ -0.32
CHKB-CPT1B-201ENST00000452668 C17orf75Q9HAS0 396 aa13.03□□□□□ -0.32
CHKB-CPT1B-201ENST00000452668 POLD4Q9HCU8 107 aa13.03□□□□□ -0.32
CHKB-CPT1B-201ENST00000452668 BACE2Q9Y5Z0 518 aa13.03□□□□□ -0.32
CHKB-CPT1B-201ENST00000452668 SMIM28A0A1B0GU29 152 aa13.02□□□□□ -0.33
CHKB-CPT1B-201ENST00000452668 ZNF197O14709 1029 aa13.02□□□□□ -0.33
CHKB-CPT1B-201ENST00000452668 HIP1RO75146 1068 aa13.02□□□□□ -0.33
CHKB-CPT1B-201ENST00000452668 MCF2P10911 925 aa13.02□□□□□ -0.33
CHKB-CPT1B-201ENST00000452668 HARSP12081 509 aaKnown RBP13.02□□□□□ -0.33
CHKB-CPT1B-201ENST00000452668 PTPN2P17706 415 aa13.02□□□□□ -0.33
CHKB-CPT1B-201ENST00000452668 TKTP29401 623 aaKnown RBP13.02□□□□□ -0.33
CHKB-CPT1B-201ENST00000452668 MARCKSP29966 332 aaPredicted RBP13.02□□□□□ -0.33
CHKB-CPT1B-201ENST00000452668 RPL9P32969 192 aaKnown RBP13.02□□□□□ -0.33
CHKB-CPT1B-201ENST00000452668 NPTX2P47972 431 aa13.02□□□□□ -0.33
CHKB-CPT1B-201ENST00000452668 GPC5P78333 572 aa13.02□□□□□ -0.33
CHKB-CPT1B-201ENST00000452668 SNW1Q13573 536 aaKnown RBP13.02□□□□□ -0.33
CHKB-CPT1B-201ENST00000452668 UBXN2BQ14CS0 331 aa13.02□□□□□ -0.33
CHKB-CPT1B-201ENST00000452668 NAB2Q15742 525 aa13.02□□□□□ -0.33
CHKB-CPT1B-201ENST00000452668 UPP1Q16831 310 aa13.02□□□□□ -0.33
CHKB-CPT1B-201ENST00000452668 MCTP1Q6DN14 999 aa13.02□□□□□ -0.33
CHKB-CPT1B-201ENST00000452668 IQCEQ6IPM2 695 aa13.02□□□□□ -0.33
CHKB-CPT1B-201ENST00000452668 PARM1Q6UWI2 310 aa13.02□□□□□ -0.33
CHKB-CPT1B-201ENST00000452668 C1orf210Q8IVY1 113 aa13.02□□□□□ -0.33
CHKB-CPT1B-201ENST00000452668 ST13P5Q8NFI4 369 aaPredicted RBP13.02□□□□□ -0.33
CHKB-CPT1B-201ENST00000452668 PJA1Q8NG27 643 aa13.02□□□□□ -0.33
CHKB-CPT1B-201ENST00000452668 FGF14Q92915 247 aa13.02□□□□□ -0.33
CHKB-CPT1B-201ENST00000452668 ACO2Q99798 780 aaKnown RBP13.02□□□□□ -0.33
CHKB-CPT1B-201ENST00000452668 GDE1Q9NZC3 331 aa13.02□□□□□ -0.33
CHKB-CPT1B-201ENST00000452668 MRPS17Q9Y2R5 130 aaKnown RBP13.02□□□□□ -0.33
CHKB-CPT1B-201ENST00000452668 KANSL1LA0AUZ9 987 aa13.01□□□□□ -0.33
CHKB-CPT1B-201ENST00000452668 E9PMD0 336 aa13.01□□□□□ -0.33
CHKB-CPT1B-201ENST00000452668 H0YCG3 227 aa13.01□□□□□ -0.33
CHKB-CPT1B-201ENST00000452668 PODXLO00592 558 aa13.01□□□□□ -0.33
CHKB-CPT1B-201ENST00000452668 SYN3O14994 580 aa13.01□□□□□ -0.33
CHKB-CPT1B-201ENST00000452668 ADAM12O43184 909 aa13.01□□□□□ -0.33
CHKB-CPT1B-201ENST00000452668 LAMTOR5O43504 91 aa13.01□□□□□ -0.33
CHKB-CPT1B-201ENST00000452668 PRPHP41219 470 aa13.01□□□□□ -0.33
CHKB-CPT1B-201ENST00000452668 MAGEA9P43362 315 aa13.01□□□□□ -0.33
CHKB-CPT1B-201ENST00000452668 ID4P47928 161 aa13.01□□□□□ -0.33
CHKB-CPT1B-201ENST00000452668 STARD6P59095 220 aa13.01□□□□□ -0.33
CHKB-CPT1B-201ENST00000452668 MLF2Q15773 248 aaPredicted RBP13.01□□□□□ -0.33
CHKB-CPT1B-201ENST00000452668 SLC44A4Q53GD3 710 aa13.01□□□□□ -0.33
CHKB-CPT1B-201ENST00000452668 MPZL3Q6UWV2 235 aa13.01□□□□□ -0.33
CHKB-CPT1B-201ENST00000452668 RSPO2Q6UXX9 243 aaPredicted RBP13.01□□□□□ -0.33
CHKB-CPT1B-201ENST00000452668 IGSF22Q8N9C0 903 aa13.01□□□□□ -0.33
CHKB-CPT1B-201ENST00000452668 APPL2Q8NEU8 664 aa13.01□□□□□ -0.33
CHKB-CPT1B-201ENST00000452668 ZNF461Q8TAF7 563 aa13.01□□□□□ -0.33
CHKB-CPT1B-201ENST00000452668 ITFG1Q8TB96 612 aa13.01□□□□□ -0.33
CHKB-CPT1B-201ENST00000452668 ING5Q8WYH8 240 aa13.01□□□□□ -0.33
CHKB-CPT1B-201ENST00000452668 BICD1Q96G01 975 aa13.01□□□□□ -0.33
CHKB-CPT1B-201ENST00000452668 BORCS6Q96GS4 357 aa13.01□□□□□ -0.33
CHKB-CPT1B-201ENST00000452668 NELL2Q99435 816 aa13.01□□□□□ -0.33
CHKB-CPT1B-201ENST00000452668 KXD1Q9BQD3 176 aa13.01□□□□□ -0.33
CHKB-CPT1B-201ENST00000452668 TARS2Q9BW92 718 aaKnown RBP13.01□□□□□ -0.33
CHKB-CPT1B-201ENST00000452668 CDT1Q9H211 546 aa13.01□□□□□ -0.33
CHKB-CPT1B-201ENST00000452668 GOLGA2P5Q9HBQ8 144 aa13.01□□□□□ -0.33
CHKB-CPT1B-201ENST00000452668 SPATA6Q9NWH7 488 aaPredicted RBP13.01□□□□□ -0.33
CHKB-CPT1B-201ENST00000452668 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.01□□□□□ -0.33
CHKB-CPT1B-201ENST00000452668 PTPRZ1P23471 2315 aaPredicted RBP13.01□□□□□ -0.33
CHKB-CPT1B-201ENST00000452668 H3BQV1 296 aa13□□□□□ -0.33
CHKB-CPT1B-201ENST00000452668 I3L4J1 428 aa13□□□□□ -0.33
CHKB-CPT1B-201ENST00000452668 KINO60870 393 aaKnown RBP13□□□□□ -0.33
CHKB-CPT1B-201ENST00000452668 RHOP08100 348 aa13□□□□□ -0.33
CHKB-CPT1B-201ENST00000452668 U2AF2P26368 475 aaKnown RBP eCLIP13□□□□□ -0.33
CHKB-CPT1B-201ENST00000452668 MCM4P33991 863 aa13□□□□□ -0.33
CHKB-CPT1B-201ENST00000452668 BRCC3P46736 316 aa13□□□□□ -0.33
CHKB-CPT1B-201ENST00000452668 ST3GAL1Q11201 340 aa13□□□□□ -0.33
CHKB-CPT1B-201ENST00000452668 NBR1Q14596 966 aa13□□□□□ -0.33
CHKB-CPT1B-201ENST00000452668 ECM1Q16610 540 aa13□□□□□ -0.33
CHKB-CPT1B-201ENST00000452668 CTXN3Q4LDR2 81 aa13□□□□□ -0.33
CHKB-CPT1B-201ENST00000452668 VARS2Q5ST30 1063 aaKnown RBP13□□□□□ -0.33
CHKB-CPT1B-201ENST00000452668 CYP4A22Q5TCH4 519 aa13□□□□□ -0.33
CHKB-CPT1B-201ENST00000452668 TPGS2Q68CL5 300 aa13□□□□□ -0.33
CHKB-CPT1B-201ENST00000452668 ZNF280DQ6N043 979 aa13□□□□□ -0.33
CHKB-CPT1B-201ENST00000452668 NPAS3Q8IXF0 933 aa13□□□□□ -0.33
CHKB-CPT1B-201ENST00000452668 KCTD17Q8N5Z5 321 aa13□□□□□ -0.33
CHKB-CPT1B-201ENST00000452668 MCRS1Q96EZ8 462 aa13□□□□□ -0.33
CHKB-CPT1B-201ENST00000452668 ZNF512Q96ME7 567 aaPredicted RBP13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms