RNA–Protein interactions for RNA: ENST00000451876.5

CPSF4-207, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 5 BASIC

Gene CPSF4, Length 1,644 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-207ENST00000451876 ZC3H11AO75152 810 aaKnown RBP eCLIP26.11■■□□□ 1.779e-6■■□□□ 13.5
CPSF4-207ENST00000451876 PLEKHO2Q8TD55 490 aa26.11■■□□□ 1.77
CPSF4-207ENST00000451876 CLP1Q92989 425 aaKnown RBP26.11■■□□□ 1.77
CPSF4-207ENST00000451876 C18orf25Q96B23 403 aaPredicted RBP26.11■■□□□ 1.77
CPSF4-207ENST00000451876 TIFAQ96CG3 184 aa26.11■■□□□ 1.77
CPSF4-207ENST00000451876 GOLGA2P5Q9HBQ8 144 aa26.11■■□□□ 1.77
CPSF4-207ENST00000451876 PLXNA4Q9HCM2 1894 aa26.11■■□□□ 1.77
CPSF4-207ENST00000451876 PTPRJQ12913 1337 aa26.11■■□□□ 1.77
CPSF4-207ENST00000451876 CETN3O15182 167 aa26.1■■□□□ 1.77
CPSF4-207ENST00000451876 IL18RAPO95256 599 aa26.1■■□□□ 1.77
CPSF4-207ENST00000451876 PPP2R2DQ66LE6 453 aa26.1■■□□□ 1.77
CPSF4-207ENST00000451876 CD302Q8IX05 232 aa26.1■■□□□ 1.77
CPSF4-207ENST00000451876 COLGALT2Q8IYK4 626 aa26.1■■□□□ 1.77
CPSF4-207ENST00000451876 CSGALNACT2Q8N6G5 542 aa26.1■■□□□ 1.77
CPSF4-207ENST00000451876 KIF12Q96FN5 646 aa26.1■■□□□ 1.77
CPSF4-207ENST00000451876 MFSD14AQ96MC6 490 aa26.1■■□□□ 1.77
CPSF4-207ENST00000451876 C17orf80Q9BSJ5 609 aa26.1■■□□□ 1.77
CPSF4-207ENST00000451876 TUBGCP4Q9UGJ1 667 aa26.1■■□□□ 1.77
CPSF4-207ENST00000451876 FRMD4BQ9Y2L6 1034 aa26.1■■□□□ 1.77
CPSF4-207ENST00000451876 ERCC5P28715 1186 aaPredicted RBP26.1■■□□□ 1.77
CPSF4-207ENST00000451876 ZBTB6Q15916 424 aa26.1■■□□□ 1.77
CPSF4-207ENST00000451876 SPOUT1Q5T280 376 aaKnown RBP26.1■■□□□ 1.77
CPSF4-207ENST00000451876 CCDC127Q96BQ5 260 aa26.1■■□□□ 1.77
CPSF4-207ENST00000451876 LRCH3Q96II8 777 aa26.1■■□□□ 1.77
CPSF4-207ENST00000451876 PAAF1Q9BRP4 392 aa26.1■■□□□ 1.77
CPSF4-207ENST00000451876 SLC28A3Q9HAS3 691 aa26.1■■□□□ 1.77
CPSF4-207ENST00000451876 MTUS1Q9ULD2 1270 aa26.1■■□□□ 1.77
CPSF4-207ENST00000451876 TRANK1O15050 2925 aa26.1■■□□□ 1.77
CPSF4-207ENST00000451876 TUSC3Q13454 348 aa26.09■■□□□ 1.77
CPSF4-207ENST00000451876 LMBRD2Q68DH5 695 aaPredicted RBP26.09■■□□□ 1.77
CPSF4-207ENST00000451876 FAM186BQ8IYM0 893 aa26.09■■□□□ 1.77
CPSF4-207ENST00000451876 RABGGTAQ92696 567 aa26.09■■□□□ 1.77
CPSF4-207ENST00000451876 FAM193BQ96PV7 902 aaPredicted RBP26.09■■□□□ 1.77
CPSF4-207ENST00000451876 COL4A4P53420 1690 aaPredicted RBP26.08■■□□□ 1.77
CPSF4-207ENST00000451876 CASTOR2A6NHX0 329 aa26.08■■□□□ 1.77
CPSF4-207ENST00000451876 CCDC192P0DO97 292 aa26.08■■□□□ 1.77
CPSF4-207ENST00000451876 PSMC2P35998 433 aaKnown RBP26.08■■□□□ 1.77
CPSF4-207ENST00000451876 GUCY2FP51841 1108 aa26.08■■□□□ 1.77
CPSF4-207ENST00000451876 TMEM132DQ14C87 1099 aa26.08■■□□□ 1.77
CPSF4-207ENST00000451876 PSMD6Q15008 389 aa26.08■■□□□ 1.77
CPSF4-207ENST00000451876 ANO6Q4KMQ2 910 aa26.08■■□□□ 1.77
CPSF4-207ENST00000451876 HABP4Q5JVS0 413 aaKnown RBP26.08■■□□□ 1.77
CPSF4-207ENST00000451876 POP1Q99575 1024 aaKnown RBP26.08■■□□□ 1.77
CPSF4-207ENST00000451876 MKNK1Q9BUB5 465 aa26.08■■□□□ 1.77
CPSF4-207ENST00000451876 C2CD2Q9Y426 696 aa26.08■■□□□ 1.77
CPSF4-207ENST00000451876 NT5C1B-RDH14C9J2C7 533 aa26.07■■□□□ 1.76
CPSF4-207ENST00000451876 F8W810 466 aa26.07■■□□□ 1.76
CPSF4-207ENST00000451876 DLATP10515 647 aaKnown RBP26.07■■□□□ 1.76
CPSF4-207ENST00000451876 SLC11A1P49279 550 aa26.07■■□□□ 1.76
CPSF4-207ENST00000451876 BCAR1P56945 870 aa26.07■■□□□ 1.76
CPSF4-207ENST00000451876 DLG4P78352 724 aa26.07■■□□□ 1.76
CPSF4-207ENST00000451876 TMEM173Q86WV6 379 aaPredicted RBP26.07■■□□□ 1.76
CPSF4-207ENST00000451876 COLGALT1Q8NBJ5 622 aa26.07■■□□□ 1.76
CPSF4-207ENST00000451876 SRRTQ9BXP5 876 aaKnown RBP26.07■■□□□ 1.76
CPSF4-207ENST00000451876 CERS4Q9HA82 394 aa26.07■■□□□ 1.76
CPSF4-207ENST00000451876 SLC38A7Q9NVC3 462 aa26.07■■□□□ 1.76
CPSF4-207ENST00000451876 MAPK13O15264 365 aa26.06■■□□□ 1.76
CPSF4-207ENST00000451876 LAG3P18627 525 aa26.06■■□□□ 1.76
CPSF4-207ENST00000451876 HSP90AA2PQ14568 343 aaPredicted RBP26.06■■□□□ 1.76
CPSF4-207ENST00000451876 CT47A1Q5JQC4 288 aaPredicted RBP26.06■■□□□ 1.76
CPSF4-207ENST00000451876 KCNT2Q6UVM3 1135 aa26.06■■□□□ 1.76
CPSF4-207ENST00000451876 PARD3BQ8TEW8 1205 aa26.06■■□□□ 1.76
CPSF4-207ENST00000451876 BORCS6Q96GS4 357 aa26.06■■□□□ 1.76
CPSF4-207ENST00000451876 CEP63Q96MT8 703 aa26.06■■□□□ 1.76
CPSF4-207ENST00000451876 UBQLN1Q9UMX0 589 aaKnown RBP26.06■■□□□ 1.76
CPSF4-207ENST00000451876 DERAQ9Y315 318 aa26.06■■□□□ 1.76
CPSF4-207ENST00000451876 SLC16A3O15427 465 aaKnown RBP26.06■■□□□ 1.76
CPSF4-207ENST00000451876 GALTP07902 379 aa26.06■■□□□ 1.76
CPSF4-207ENST00000451876 EPB41P11171 864 aaKnown RBP26.06■■□□□ 1.76
CPSF4-207ENST00000451876 CTNNB1P35222 781 aa26.06■■□□□ 1.76
CPSF4-207ENST00000451876 CLCNKBP51801 687 aa26.06■■□□□ 1.76
CPSF4-207ENST00000451876 OR5B17Q8NGF7 314 aa26.06■■□□□ 1.76
CPSF4-207ENST00000451876 TGS1Q96RS0 853 aaKnown RBP26.06■■□□□ 1.76
CPSF4-207ENST00000451876 FNBP1Q96RU3 617 aa26.06■■□□□ 1.76
CPSF4-207ENST00000451876 PRG3Q9Y2Y8 225 aaPredicted RBP26.06■■□□□ 1.76
CPSF4-207ENST00000451876 SCN1AP35498 2009 aa26.05■■□□□ 1.76
CPSF4-207ENST00000451876 LRRIQ3A6PVS8 624 aaPredicted RBP26.05■■□□□ 1.76
CPSF4-207ENST00000451876 NRP1O14786 923 aa26.05■■□□□ 1.76
CPSF4-207ENST00000451876 IGFBP6P24592 240 aaPredicted RBP26.05■■□□□ 1.76
CPSF4-207ENST00000451876 OR1G1P47890 313 aa26.05■■□□□ 1.76
CPSF4-207ENST00000451876 ERVK-21P61565 698 aa26.05■■□□□ 1.76
CPSF4-207ENST00000451876 TFAMQ00059 246 aaKnown RBP26.05■■□□□ 1.76
CPSF4-207ENST00000451876 EPC2Q52LR7 807 aa26.05■■□□□ 1.76
CPSF4-207ENST00000451876 SPATA1Q5VX52 437 aa26.05■■□□□ 1.76
CPSF4-207ENST00000451876 BCL7CQ8WUZ0 217 aaPredicted RBP26.05■■□□□ 1.76
CPSF4-207ENST00000451876 ZNF558Q96NG5 402 aa26.05■■□□□ 1.76
CPSF4-207ENST00000451876 TSPAN18Q96SJ8 248 aa26.05■■□□□ 1.76
CPSF4-207ENST00000451876 TMEM175Q9BSA9 504 aa26.05■■□□□ 1.76
CPSF4-207ENST00000451876 MTMR12Q9C0I1 747 aa26.05■■□□□ 1.76
CPSF4-207ENST00000451876 BMPR1AP36894 532 aa26.04■■□□□ 1.76
CPSF4-207ENST00000451876 ALDH7A1P49419 539 aaKnown RBP26.04■■□□□ 1.76
CPSF4-207ENST00000451876 BFSP1Q12934 665 aa26.04■■□□□ 1.76
CPSF4-207ENST00000451876 SURF1Q15526 300 aa26.04■■□□□ 1.76
CPSF4-207ENST00000451876 C1orf220Q5T0J3 134 aa26.04■■□□□ 1.76
CPSF4-207ENST00000451876 SCARA3Q6AZY7 606 aa26.04■■□□□ 1.76
CPSF4-207ENST00000451876 INTS8Q75QN2 995 aaKnown RBP26.04■■□□□ 1.76
CPSF4-207ENST00000451876 FILIP1Q7Z7B0 1213 aa26.04■■□□□ 1.76
CPSF4-207ENST00000451876 WDR49Q8IV35 697 aa26.04■■□□□ 1.76
CPSF4-207ENST00000451876 CGRRF1Q99675 332 aa26.04■■□□□ 1.76
CPSF4-207ENST00000451876 INTS13Q9NVM9 706 aa26.04■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms