RNA–Protein interactions for RNA: ENST00000449307.3

AC006001.3-201, humanhuman

TSL 3 BASIC

Gene AC006001.3, Length 7,092 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC006001.3-201ENST00000449307 PRR12Q9ULL5 1215 aa13.45□□□□□ -0.26
AC006001.3-201ENST00000449307 CAPN11Q9UMQ6 739 aa13.45□□□□□ -0.26
AC006001.3-201ENST00000449307 EEF2KO00418 725 aaKnown RBP13.44□□□□□ -0.26
AC006001.3-201ENST00000449307 PCDH8O95206 1070 aa13.44□□□□□ -0.26
AC006001.3-201ENST00000449307 USP11P51784 963 aa13.44□□□□□ -0.26
AC006001.3-201ENST00000449307 EIF2B5Q13144 721 aaKnown RBP13.44□□□□□ -0.26
AC006001.3-201ENST00000449307 TBC1D1Q86TI0 1168 aaPredicted RBP13.44□□□□□ -0.26
AC006001.3-201ENST00000449307 GTPBP10A4D1E9 387 aaKnown RBP13.44□□□□□ -0.26
AC006001.3-201ENST00000449307 DEUP1Q05D60 604 aa13.44□□□□□ -0.26
AC006001.3-201ENST00000449307 GPS1Q13098 491 aa13.44□□□□□ -0.26
AC006001.3-201ENST00000449307 CHAMP1Q96JM3 812 aa13.44□□□□□ -0.26
AC006001.3-201ENST00000449307 ZMYND12Q9H0C1 365 aa13.44□□□□□ -0.26
AC006001.3-201ENST00000449307 PDHXO00330 501 aa13.44□□□□□ -0.26
AC006001.3-201ENST00000449307 KCNN4O15554 427 aa13.44□□□□□ -0.26
AC006001.3-201ENST00000449307 HOXA2O43364 376 aa13.44□□□□□ -0.26
AC006001.3-201ENST00000449307 IGKV5-2P06315 115 aa13.44□□□□□ -0.26
AC006001.3-201ENST00000449307 TGFB2P61812 414 aa13.44□□□□□ -0.26
AC006001.3-201ENST00000449307 AMPD2Q01433 879 aa13.44□□□□□ -0.26
AC006001.3-201ENST00000449307 KRT72Q14CN4 511 aa13.44□□□□□ -0.26
AC006001.3-201ENST00000449307 CHMP1BQ7LBR1 199 aa13.44□□□□□ -0.26
AC006001.3-201ENST00000449307 RD3Q7Z3Z2 195 aa13.44□□□□□ -0.26
AC006001.3-201ENST00000449307 FBXO16Q8IX29 292 aaPredicted RBP13.44□□□□□ -0.26
AC006001.3-201ENST00000449307 TSEN34Q9BSV6 310 aaKnown RBP13.44□□□□□ -0.26
AC006001.3-201ENST00000449307 CIPCQ9C0C6 399 aa13.44□□□□□ -0.26
AC006001.3-201ENST00000449307 PP2D1A8MPX8 630 aa13.44□□□□□ -0.26
AC006001.3-201ENST00000449307 ZNF263O14978 683 aa13.44□□□□□ -0.26
AC006001.3-201ENST00000449307 AMHP03971 560 aa13.44□□□□□ -0.26
AC006001.3-201ENST00000449307 ERAP2Q6P179 960 aa13.44□□□□□ -0.26
AC006001.3-201ENST00000449307 LRRC37BQ96QE4 947 aa13.44□□□□□ -0.26
AC006001.3-201ENST00000449307 SENP7Q9BQF6 1050 aa13.44□□□□□ -0.26
AC006001.3-201ENST00000449307 APOL5Q9BWW9 433 aa13.44□□□□□ -0.26
AC006001.3-201ENST00000449307 TUFT1Q9NNX1 390 aa13.44□□□□□ -0.26
AC006001.3-201ENST00000449307 DDX56Q9NY93 547 aaKnown RBP13.44□□□□□ -0.26
AC006001.3-201ENST00000449307 CPSF2Q9P2I0 782 aaKnown RBP13.44□□□□□ -0.26
AC006001.3-201ENST00000449307 NIPSNAP3AQ9UFN0 247 aaPredicted RBP13.44□□□□□ -0.26
AC006001.3-201ENST00000449307 ASS1P00966 412 aaKnown RBP13.44□□□□□ -0.26
AC006001.3-201ENST00000449307 NCAM1P13591 858 aa13.44□□□□□ -0.26
AC006001.3-201ENST00000449307 ZBED6P86452 979 aa13.44□□□□□ -0.26
AC006001.3-201ENST00000449307 PKP1Q13835 747 aa13.44□□□□□ -0.26
AC006001.3-201ENST00000449307 GOLGA7BQ2TAP0 167 aa13.44□□□□□ -0.26
AC006001.3-201ENST00000449307 FMO2Q99518 471 aa13.44□□□□□ -0.26
AC006001.3-201ENST00000449307 CINPQ9BW66 212 aaPredicted RBP13.44□□□□□ -0.26
AC006001.3-201ENST00000449307 LY9Q9HBG7 655 aa13.44□□□□□ -0.26
AC006001.3-201ENST00000449307 THG1LQ9NWX6 298 aaKnown RBP13.44□□□□□ -0.26
AC006001.3-201ENST00000449307 BFARQ9NZS9 450 aa13.44□□□□□ -0.26
AC006001.3-201ENST00000449307 FTLP02792 175 aaPredicted RBP13.43□□□□□ -0.26
AC006001.3-201ENST00000449307 ANKS6Q68DC2 871 aa13.43□□□□□ -0.26
AC006001.3-201ENST00000449307 SMAP1Q8IYB5 467 aaPredicted RBP13.43□□□□□ -0.26
AC006001.3-201ENST00000449307 AGBL3Q8NEM8 1001 aa13.43□□□□□ -0.26
AC006001.3-201ENST00000449307 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.43□□□□□ -0.26
AC006001.3-201ENST00000449307 CHST12Q9NRB3 414 aa13.43□□□□□ -0.26
AC006001.3-201ENST00000449307 MAD2L2Q9UI95 211 aa13.43□□□□□ -0.26
AC006001.3-201ENST00000449307 CPSF1Q10570 1443 aaKnown RBP13.43□□□□□ -0.26
AC006001.3-201ENST00000449307 A2ML1A8K2U0 1454 aa13.43□□□□□ -0.26
AC006001.3-201ENST00000449307 A0A1B0GUA9 196 aa13.43□□□□□ -0.26
AC006001.3-201ENST00000449307 ENDOD1O94919 500 aa13.43□□□□□ -0.26
AC006001.3-201ENST00000449307 ERVK-10P10266 1014 aa13.43□□□□□ -0.26
AC006001.3-201ENST00000449307 NBPF20Q3BBV1 942 aa13.43□□□□□ -0.26
AC006001.3-201ENST00000449307 DCAF6Q58WW2 860 aa13.43□□□□□ -0.26
AC006001.3-201ENST00000449307 NBPF10Q6P3W6 841 aaKnown RBP13.43□□□□□ -0.26
AC006001.3-201ENST00000449307 ERO1BQ86YB8 467 aa13.43□□□□□ -0.26
AC006001.3-201ENST00000449307 UBA3Q8TBC4 463 aa13.43□□□□□ -0.26
AC006001.3-201ENST00000449307 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP13.43□□□□□ -0.26
AC006001.3-201ENST00000449307 PALMO75781 387 aa13.43□□□□□ -0.26
AC006001.3-201ENST00000449307 ZNF177Q13360 481 aaPredicted RBP13.43□□□□□ -0.26
AC006001.3-201ENST00000449307 CAPN7Q9Y6W3 813 aa13.43□□□□□ -0.26
AC006001.3-201ENST00000449307 DGAT1O75907 488 aa13.43□□□□□ -0.26
AC006001.3-201ENST00000449307 AVPR1AP37288 418 aa13.43□□□□□ -0.26
AC006001.3-201ENST00000449307 E4F1Q66K89 784 aaPredicted RBP13.43□□□□□ -0.26
AC006001.3-201ENST00000449307 AHCYL2Q96HN2 611 aaKnown RBP13.43□□□□□ -0.26
AC006001.3-201ENST00000449307 FBXO10Q9UK96 956 aa13.43□□□□□ -0.26
AC006001.3-201ENST00000449307 KRT87PA6NCN2 255 aa13.43□□□□□ -0.26
AC006001.3-201ENST00000449307 SOAT1P35610 550 aa13.43□□□□□ -0.26
AC006001.3-201ENST00000449307 HES6Q96HZ4 224 aa13.43□□□□□ -0.26
AC006001.3-201ENST00000449307 CLMNQ96JQ2 1002 aa13.43□□□□□ -0.26
AC006001.3-201ENST00000449307 HMX1Q9NP08 348 aaPredicted RBP13.43□□□□□ -0.26
AC006001.3-201ENST00000449307 SPATA31A5Q5VU36 1347 aa13.43□□□□□ -0.26
AC006001.3-201ENST00000449307 SPATA31A7Q8IWB4 1347 aa13.43□□□□□ -0.26
AC006001.3-201ENST00000449307 ASAP2O43150 1006 aa13.43□□□□□ -0.26
AC006001.3-201ENST00000449307 B3GAT3O94766 335 aa13.43□□□□□ -0.26
AC006001.3-201ENST00000449307 VTNP04004 478 aa13.43□□□□□ -0.26
AC006001.3-201ENST00000449307 GCLCP48506 637 aaPredicted RBP13.43□□□□□ -0.26
AC006001.3-201ENST00000449307 CCT5P48643 541 aa13.43□□□□□ -0.26
AC006001.3-201ENST00000449307 GFPT1Q06210 699 aaPredicted RBP13.43□□□□□ -0.26
AC006001.3-201ENST00000449307 BTG3Q14201 252 aaPredicted RBP13.43□□□□□ -0.26
AC006001.3-201ENST00000449307 POLD3Q15054 466 aaPredicted RBP13.43□□□□□ -0.26
AC006001.3-201ENST00000449307 C11orf57Q6ZUT1 292 aaPredicted RBP13.43□□□□□ -0.26
AC006001.3-201ENST00000449307 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.43□□□□□ -0.26
AC006001.3-201ENST00000449307 PHACTR4Q8IZ21 702 aa13.43□□□□□ -0.26
AC006001.3-201ENST00000449307 NAF1Q96HR8 494 aaKnown RBP13.43□□□□□ -0.26
AC006001.3-201ENST00000449307 ELMO2Q96JJ3 720 aa13.43□□□□□ -0.26
AC006001.3-201ENST00000449307 RUBCNLQ9H714 662 aa13.43□□□□□ -0.26
AC006001.3-201ENST00000449307 CATSPERBQ9H7T0 1116 aa13.43□□□□□ -0.26
AC006001.3-201ENST00000449307 GIMAP4Q9NUV9 329 aa13.43□□□□□ -0.26
AC006001.3-201ENST00000449307 MTMR4Q9NYA4 1195 aa13.43□□□□□ -0.26
AC006001.3-201ENST00000449307 SLC39A10Q9ULF5 831 aa13.43□□□□□ -0.26
AC006001.3-201ENST00000449307 PACSIN2Q9UNF0 486 aaPredicted RBP13.43□□□□□ -0.26
AC006001.3-201ENST00000449307 ARHGEF5Q12774 1597 aa13.42□□□□□ -0.26
AC006001.3-201ENST00000449307 EIF4E1BA6NMX2 242 aaKnown RBP13.42□□□□□ -0.26
AC006001.3-201ENST00000449307 MEFVO15553 781 aaPredicted RBP13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms