RNA–Protein interactions for RNA: ENST00000449049.7

SHMT2-203, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2 BASIC

Gene SHMT2, Length 2,121 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-203ENST00000449049 KCNE1P15382 129 aa15.21■□□□□ 0.03
SHMT2-203ENST00000449049 PBX1P40424 430 aa15.21■□□□□ 0.03
SHMT2-203ENST00000449049 FPGSQ05932 587 aa15.21■□□□□ 0.03
SHMT2-203ENST00000449049 LMBRD2Q68DH5 695 aaPredicted RBP15.21■□□□□ 0.03
SHMT2-203ENST00000449049 KRT39Q6A163 491 aa15.21■□□□□ 0.03
SHMT2-203ENST00000449049 CRIPAKQ8N1N5 446 aa15.21■□□□□ 0.03
SHMT2-203ENST00000449049 OR5B17Q8NGF7 314 aa15.21■□□□□ 0.03
SHMT2-203ENST00000449049 ZMAT2Q96NC0 199 aaKnown RBP15.21■□□□□ 0.03
SHMT2-203ENST00000449049 ERGIC2Q96RQ1 377 aa15.21■□□□□ 0.03
SHMT2-203ENST00000449049 RSAD1Q9HA92 442 aa15.21■□□□□ 0.03
SHMT2-203ENST00000449049 KLK14Q9P0G3 267 aa15.21■□□□□ 0.03
SHMT2-203ENST00000449049 PCDH10Q9P2E7 1040 aa15.21■□□□□ 0.03
SHMT2-203ENST00000449049 MXI1P50539 228 aa15.2■□□□□ 0.02
SHMT2-203ENST00000449049 MYL7Q01449 175 aa15.2■□□□□ 0.02
SHMT2-203ENST00000449049 TMEM132DQ14C87 1099 aa15.2■□□□□ 0.02
SHMT2-203ENST00000449049 ZACNQ401N2 412 aa15.2■□□□□ 0.02
SHMT2-203ENST00000449049 GSTCDQ8NEC7 633 aa15.2■□□□□ 0.02
SHMT2-203ENST00000449049 MMRN2Q9H8L6 949 aa15.2■□□□□ 0.02
SHMT2-203ENST00000449049 SMIM28A0A1B0GU29 152 aa15.2■□□□□ 0.02
SHMT2-203ENST00000449049 A0A1W2PQC6 194 aa15.2■□□□□ 0.02
SHMT2-203ENST00000449049 PTGESO14684 152 aa15.2■□□□□ 0.02
SHMT2-203ENST00000449049 EFCAB14O75071 495 aa15.2■□□□□ 0.02
SHMT2-203ENST00000449049 BAIAP3O94812 1187 aa15.2■□□□□ 0.02
SHMT2-203ENST00000449049 SYN1P17600 705 aa15.2■□□□□ 0.02
SHMT2-203ENST00000449049 MLH1P40692 756 aa15.2■□□□□ 0.02
SHMT2-203ENST00000449049 ZBTB6Q15916 424 aa15.2■□□□□ 0.02
SHMT2-203ENST00000449049 DUOXA2Q1HG44 320 aa15.2■□□□□ 0.02
SHMT2-203ENST00000449049 TDRD10Q5VZ19 366 aaKnown RBP15.2■□□□□ 0.02
SHMT2-203ENST00000449049 SV2AQ7L0J3 742 aa15.2■□□□□ 0.02
SHMT2-203ENST00000449049 RNF169Q8NCN4 708 aa15.2■□□□□ 0.02
SHMT2-203ENST00000449049 DPF3Q92784 378 aa15.2■□□□□ 0.02
SHMT2-203ENST00000449049 KIF12Q96FN5 646 aa15.2■□□□□ 0.02
SHMT2-203ENST00000449049 FAM84AQ96KN4 292 aa15.2■□□□□ 0.02
SHMT2-203ENST00000449049 MTMR12Q9C0I1 747 aa15.2■□□□□ 0.02
SHMT2-203ENST00000449049 RNF19AQ9NV58 838 aa15.2■□□□□ 0.02
SHMT2-203ENST00000449049 RNF216Q9NWF9 866 aaPredicted RBP15.2■□□□□ 0.02
SHMT2-203ENST00000449049 COQ4Q9Y3A0 265 aa15.2■□□□□ 0.02
SHMT2-203ENST00000449049 ARL5CA6NH57 179 aa15.19■□□□□ 0.02
SHMT2-203ENST00000449049 TULP1O00294 542 aaPredicted RBP15.19■□□□□ 0.02
SHMT2-203ENST00000449049 TMEM191BP0C7N4 346 aa15.19■□□□□ 0.02
SHMT2-203ENST00000449049 ACRP10323 421 aa15.19■□□□□ 0.02
SHMT2-203ENST00000449049 CDC25BP30305 580 aa15.19■□□□□ 0.02
SHMT2-203ENST00000449049 TFAMQ00059 246 aaKnown RBP15.19■□□□□ 0.02
SHMT2-203ENST00000449049 KCNMA1Q12791 1236 aa15.19■□□□□ 0.02
SHMT2-203ENST00000449049 EPC2Q52LR7 807 aa15.19■□□□□ 0.02
SHMT2-203ENST00000449049 C16orf59Q7L2K0 433 aa15.19■□□□□ 0.02
SHMT2-203ENST00000449049 CACTINQ8WUQ7 758 aaKnown RBP15.19■□□□□ 0.02
SHMT2-203ENST00000449049 ANKRD36BP1Q96IX9 119 aa15.19■□□□□ 0.02
SHMT2-203ENST00000449049 ZFP42Q96MM3 310 aa15.19■□□□□ 0.02
SHMT2-203ENST00000449049 GAD1Q99259 594 aa15.19■□□□□ 0.02
SHMT2-203ENST00000449049 ZMYND8Q9ULU4 1186 aaPredicted RBP15.19■□□□□ 0.02
SHMT2-203ENST00000449049 OFD1O75665 1012 aa15.19■□□□□ 0.02
SHMT2-203ENST00000449049 TNNC2P02585 160 aa15.19■□□□□ 0.02
SHMT2-203ENST00000449049 ACTN1P12814 892 aa15.19■□□□□ 0.02
SHMT2-203ENST00000449049 GLRA4Q5JXX5 417 aa15.19■□□□□ 0.02
SHMT2-203ENST00000449049 LIN28BQ6ZN17 250 aaKnown RBP eCLIP15.19■□□□□ 0.024e-7■□□□□ 9.3
SHMT2-203ENST00000449049 GBP6Q6ZN66 633 aa15.19■□□□□ 0.02
SHMT2-203ENST00000449049 TRAPPC11Q7Z392 1133 aa15.19■□□□□ 0.02
SHMT2-203ENST00000449049 NPAS4Q8IUM7 802 aa15.19■□□□□ 0.02
SHMT2-203ENST00000449049 VSTM4Q8IW00 320 aa15.19■□□□□ 0.02
SHMT2-203ENST00000449049 PPP1R10Q96QC0 940 aaKnown RBP15.19■□□□□ 0.02
SHMT2-203ENST00000449049 SIK3Q9Y2K2 1263 aa15.19■□□□□ 0.02
SHMT2-203ENST00000449049 PCDHB7Q9Y5E2 793 aa15.19■□□□□ 0.02
SHMT2-203ENST00000449049 CETN1Q12798 172 aa15.18■□□□□ 0.02
SHMT2-203ENST00000449049 SYCP1Q15431 976 aa15.18■□□□□ 0.02
SHMT2-203ENST00000449049 CLLU1OSQ5K130 101 aa15.18■□□□□ 0.02
SHMT2-203ENST00000449049 ARHGAP30Q7Z6I6 1101 aaPredicted RBP15.18■□□□□ 0.02
SHMT2-203ENST00000449049 FBXL13Q8NEE6 735 aa15.18■□□□□ 0.02
SHMT2-203ENST00000449049 LMO3Q8TAP4 145 aa15.18■□□□□ 0.02
SHMT2-203ENST00000449049 TAS1R2Q8TE23 839 aa15.18■□□□□ 0.02
SHMT2-203ENST00000449049 RPS6KC1Q96S38 1066 aa15.18■□□□□ 0.02
SHMT2-203ENST00000449049 ZMYND15Q9H091 742 aa15.18■□□□□ 0.02
SHMT2-203ENST00000449049 MIOSQ9NXC5 875 aa15.18■□□□□ 0.02
SHMT2-203ENST00000449049 UBQLN1Q9UMX0 589 aaKnown RBP15.18■□□□□ 0.02
SHMT2-203ENST00000449049 ITIH6Q6UXX5 1313 aa15.18■□□□□ 0.02
SHMT2-203ENST00000449049 MKI67P46013 3256 aaKnown RBP15.18■□□□□ 0.02
SHMT2-203ENST00000449049 TRIP11Q15643 1979 aa15.18■□□□□ 0.02
SHMT2-203ENST00000449049 VNN1O95497 513 aa15.17■□□□□ 0.02
SHMT2-203ENST00000449049 CYP3A5P20815 502 aa15.17■□□□□ 0.02
SHMT2-203ENST00000449049 IBSPP21815 317 aaPredicted RBP15.17■□□□□ 0.02
SHMT2-203ENST00000449049 AFF1P51825 1210 aaKnown RBP15.17■□□□□ 0.02
SHMT2-203ENST00000449049 EPHB4P54760 987 aa15.17■□□□□ 0.02
SHMT2-203ENST00000449049 WDR5P61964 334 aaKnown RBP15.17■□□□□ 0.02
SHMT2-203ENST00000449049 NAB2Q15742 525 aa15.17■□□□□ 0.02
SHMT2-203ENST00000449049 PTPN21Q16825 1174 aa15.17■□□□□ 0.02
SHMT2-203ENST00000449049 EXOC3L4Q17RC7 722 aa15.17■□□□□ 0.02
SHMT2-203ENST00000449049 PSRC1Q6PGN9 363 aaPredicted RBP15.17■□□□□ 0.02
SHMT2-203ENST00000449049 GLB1LQ6UWU2 654 aa15.17■□□□□ 0.02
SHMT2-203ENST00000449049 C1orf127Q8N9H9 656 aa15.17■□□□□ 0.02
SHMT2-203ENST00000449049 CXorf38Q8TB03 319 aa15.17■□□□□ 0.02
SHMT2-203ENST00000449049 GCNT4Q9P109 453 aa15.17■□□□□ 0.02
SHMT2-203ENST00000449049 TUBGCP4Q9UGJ1 667 aa15.17■□□□□ 0.02
SHMT2-203ENST00000449049 LRFN2Q9ULH4 789 aa15.17■□□□□ 0.02
SHMT2-203ENST00000449049 PLAGL2Q9UPG8 496 aa15.17■□□□□ 0.02
SHMT2-203ENST00000449049 GTF3C5Q9Y5Q8 519 aaPredicted RBP15.17■□□□□ 0.02
SHMT2-203ENST00000449049 TTC3P53804 2025 aa15.17■□□□□ 0.02
SHMT2-203ENST00000449049 HOXA2O43364 376 aa15.17■□□□□ 0.02
SHMT2-203ENST00000449049 XPOTO43592 962 aaKnown RBP15.17■□□□□ 0.02
SHMT2-203ENST00000449049 FGBP02675 491 aa15.17■□□□□ 0.02
SHMT2-203ENST00000449049 FGFR1P11362 822 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms