RNA–Protein interactions for RNA: ENST00000448497.1

RFC4-209, Transcript of replication factor C subunit 4, humanhuman

TSL 5

Gene RFC4, Length 453 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-209ENST00000448497 TRMT1LQ7Z2T5 733 aaKnown RBP7.47□□□□□ -1.21
RFC4-209ENST00000448497 TRAPPC11Q7Z392 1133 aa7.47□□□□□ -1.21
RFC4-209ENST00000448497 ZNF571Q7Z3V5 609 aaPredicted RBP7.47□□□□□ -1.21
RFC4-209ENST00000448497 TRIM50Q86XT4 487 aa7.47□□□□□ -1.21
RFC4-209ENST00000448497 FAM71AQ8IYT1 594 aa7.47□□□□□ -1.21
RFC4-209ENST00000448497 ZSWIM2Q8NEG5 633 aa7.47□□□□□ -1.21
RFC4-209ENST00000448497 OLIG1Q8TAK6 271 aa7.47□□□□□ -1.21
RFC4-209ENST00000448497 AFG1LQ8WV93 481 aa7.47□□□□□ -1.21
RFC4-209ENST00000448497 ANKRD7Q92527 254 aa7.47□□□□□ -1.21
RFC4-209ENST00000448497 SECISBP2LQ93073 1101 aaKnown RBP7.47□□□□□ -1.21
RFC4-209ENST00000448497 SAAL1Q96ER3 474 aa7.47□□□□□ -1.21
RFC4-209ENST00000448497 BICD1Q96G01 975 aa7.47□□□□□ -1.21
RFC4-209ENST00000448497 FAXDC2Q96IV6 333 aa7.47□□□□□ -1.21
RFC4-209ENST00000448497 ACO2Q99798 780 aaKnown RBP7.47□□□□□ -1.21
RFC4-209ENST00000448497 TARS2Q9BW92 718 aaKnown RBP7.47□□□□□ -1.21
RFC4-209ENST00000448497 PRKD2Q9BZL6 878 aa7.47□□□□□ -1.21
RFC4-209ENST00000448497 HAPLN2Q9GZV7 340 aa7.47□□□□□ -1.21
RFC4-209ENST00000448497 RNPEPQ9H4A4 650 aa7.47□□□□□ -1.21
RFC4-209ENST00000448497 ZFYVE28Q9HCC9 887 aa7.47□□□□□ -1.21
RFC4-209ENST00000448497 PTPRHQ9HD43 1115 aa7.47□□□□□ -1.21
RFC4-209ENST00000448497 PRMT7Q9NVM4 692 aaPredicted RBP7.47□□□□□ -1.21
RFC4-209ENST00000448497 SUCLA2Q9P2R7 463 aaPredicted RBP7.47□□□□□ -1.21
RFC4-209ENST00000448497 ADAMTS1Q9UHI8 967 aa7.47□□□□□ -1.21
RFC4-209ENST00000448497 AJAP1Q9UKB5 411 aaPredicted RBP7.47□□□□□ -1.21
RFC4-209ENST00000448497 GJD2Q9UKL4 321 aa7.47□□□□□ -1.21
RFC4-209ENST00000448497 GNEQ9Y223 722 aaKnown RBP7.47□□□□□ -1.21
RFC4-209ENST00000448497 JRKLQ9Y4A0 524 aa7.47□□□□□ -1.21
RFC4-209ENST00000448497 PCDHGC5Q9Y5F6 944 aa7.47□□□□□ -1.21
RFC4-209ENST00000448497 PDCD11Q14690 1871 aaKnown RBP7.47□□□□□ -1.21
RFC4-209ENST00000448497 GOLGA8IPA6NC78 632 aa7.46□□□□□ -1.22
RFC4-209ENST00000448497 GOLGA8JA6NMD2 632 aa7.46□□□□□ -1.22
RFC4-209ENST00000448497 H3BRB1 525 aa7.46□□□□□ -1.22
RFC4-209ENST00000448497 FOXN3O00409 490 aaPredicted RBP7.46□□□□□ -1.22
RFC4-209ENST00000448497 DDX3XO00571 662 aaKnown RBP eCLIP7.46□□□□□ -1.22
RFC4-209ENST00000448497 OGTO15294 1046 aa7.46□□□□□ -1.22
RFC4-209ENST00000448497 CLDN3O15551 220 aa7.46□□□□□ -1.22
RFC4-209ENST00000448497 CA12O43570 354 aa7.46□□□□□ -1.22
RFC4-209ENST00000448497 TADA3O75528 432 aa7.46□□□□□ -1.22
RFC4-209ENST00000448497 ALDH1A1P00352 501 aa7.46□□□□□ -1.22
RFC4-209ENST00000448497 C4BPAP04003 597 aaKnown RBP7.46□□□□□ -1.22
RFC4-209ENST00000448497 PRKCBP05771 671 aa7.46□□□□□ -1.22
RFC4-209ENST00000448497 ZNF865P0CJ78 1059 aaPredicted RBP7.46□□□□□ -1.22
RFC4-209ENST00000448497 MARK3P27448 753 aa7.46□□□□□ -1.22
RFC4-209ENST00000448497 TMOD1P28289 359 aa7.46□□□□□ -1.22
RFC4-209ENST00000448497 HADHBP55084 474 aaKnown RBP7.46□□□□□ -1.22
RFC4-209ENST00000448497 NKX3-2P78367 333 aa7.46□□□□□ -1.22
RFC4-209ENST00000448497 TNFAIP2Q03169 654 aa7.46□□□□□ -1.22
RFC4-209ENST00000448497 ITIH3Q06033 890 aa7.46□□□□□ -1.22
RFC4-209ENST00000448497 GFPT1Q06210 699 aaPredicted RBP7.46□□□□□ -1.22
RFC4-209ENST00000448497 DRP2Q13474 957 aa7.46□□□□□ -1.22
RFC4-209ENST00000448497 IFI16Q16666 785 aaKnown RBP7.46□□□□□ -1.22
RFC4-209ENST00000448497 KYAT1Q16773 422 aa7.46□□□□□ -1.22
RFC4-209ENST00000448497 TMEM63BQ5T3F8 832 aa7.46□□□□□ -1.22
RFC4-209ENST00000448497 RSRC2Q7L4I2 434 aaKnown RBP7.46□□□□□ -1.22
RFC4-209ENST00000448497 ZNF572Q7Z3I7 529 aaPredicted RBP7.46□□□□□ -1.22
RFC4-209ENST00000448497 MTERF4Q7Z6M4 381 aaKnown RBP7.46□□□□□ -1.22
RFC4-209ENST00000448497 ZNF410Q86VK4 478 aa7.46□□□□□ -1.22
RFC4-209ENST00000448497 BRSK2Q8IWQ3 736 aa7.46□□□□□ -1.22
RFC4-209ENST00000448497 CEP112Q8N8E3 955 aa7.46□□□□□ -1.22
RFC4-209ENST00000448497 ZNF511Q8NB15 262 aa7.46□□□□□ -1.22
RFC4-209ENST00000448497 RNF149Q8NC42 400 aa7.46□□□□□ -1.22
RFC4-209ENST00000448497 HELQQ8TDG4 1101 aa7.46□□□□□ -1.22
RFC4-209ENST00000448497 EPS8L1Q8TE68 723 aa7.46□□□□□ -1.22
RFC4-209ENST00000448497 RPGRIP1Q96KN7 1286 aa7.46□□□□□ -1.22
RFC4-209ENST00000448497 NT5C1BQ96P26 610 aa7.46□□□□□ -1.22
RFC4-209ENST00000448497 NOX5Q96PH1 765 aa7.46□□□□□ -1.22
RFC4-209ENST00000448497 ALS2CR12Q96Q35 445 aa7.46□□□□□ -1.22
RFC4-209ENST00000448497 CGRRF1Q99675 332 aa7.46□□□□□ -1.22
RFC4-209ENST00000448497 APBA2Q99767 749 aa7.46□□□□□ -1.22
RFC4-209ENST00000448497 FAM213AQ9BRX8 229 aa7.46□□□□□ -1.22
RFC4-209ENST00000448497 MSTO1Q9BUK6 570 aa7.46□□□□□ -1.22
RFC4-209ENST00000448497 TUT1Q9H6E5 874 aaKnown RBP7.46□□□□□ -1.22
RFC4-209ENST00000448497 RAB20Q9NX57 234 aa7.46□□□□□ -1.22
RFC4-209ENST00000448497 CPA4Q9UI42 421 aa7.46□□□□□ -1.22
RFC4-209ENST00000448497 TNFSF13BQ9Y275 285 aa7.46□□□□□ -1.22
RFC4-209ENST00000448497 CNTNAP2Q9UHC6 1331 aa7.46□□□□□ -1.22
RFC4-209ENST00000448497 TRIP12Q14669 1992 aaPredicted RBP7.46□□□□□ -1.22
RFC4-209ENST00000448497 SCN10AQ9Y5Y9 1956 aa7.46□□□□□ -1.22
RFC4-209ENST00000448497 C11orf97A0A1B0GVM6 126 aaPredicted RBP7.45□□□□□ -1.22
RFC4-209ENST00000448497 MBLAC1A4D2B0 266 aaPredicted RBP7.45□□□□□ -1.22
RFC4-209ENST00000448497 HAS3O00219 553 aa7.45□□□□□ -1.22
RFC4-209ENST00000448497 B4GALT4O60513 344 aa7.45□□□□□ -1.22
RFC4-209ENST00000448497 F2P00734 622 aa7.45□□□□□ -1.22
RFC4-209ENST00000448497 EDN1P05305 212 aa7.45□□□□□ -1.22
RFC4-209ENST00000448497 GZMAP12544 262 aa7.45□□□□□ -1.22
RFC4-209ENST00000448497 KLRC1P26715 233 aa7.45□□□□□ -1.22
RFC4-209ENST00000448497 PHKA2P46019 1235 aa7.45□□□□□ -1.22
RFC4-209ENST00000448497 NLRP11P59045 1033 aaKnown RBP7.45□□□□□ -1.22
RFC4-209ENST00000448497 MAP2K1Q02750 393 aaPredicted RBP7.45□□□□□ -1.22
RFC4-209ENST00000448497 MBTD1Q05BQ5 628 aa7.45□□□□□ -1.22
RFC4-209ENST00000448497 NCBP1Q09161 790 aaKnown RBP7.45□□□□□ -1.22
RFC4-209ENST00000448497 PRPF4BQ13523 1007 aaKnown RBP7.45□□□□□ -1.22
RFC4-209ENST00000448497 KIAA0753Q2KHM9 967 aa7.45□□□□□ -1.22
RFC4-209ENST00000448497 ALKBH5Q6P6C2 394 aaKnown RBP7.45□□□□□ -1.22
RFC4-209ENST00000448497 GJB7Q6PEY0 223 aa7.45□□□□□ -1.22
RFC4-209ENST00000448497 MTHFD1LQ6UB35 978 aa7.45□□□□□ -1.22
RFC4-209ENST00000448497 MPZL3Q6UWV2 235 aa7.45□□□□□ -1.22
RFC4-209ENST00000448497 SRGAP1Q7Z6B7 1085 aa7.45□□□□□ -1.22
RFC4-209ENST00000448497 ZNF598Q86UK7 904 aaKnown RBP7.45□□□□□ -1.22
RFC4-209ENST00000448497 BPHLQ86WA6 291 aaPredicted RBP7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms