RNA–Protein interactions for RNA: ENST00000448238.2

NIPBL-202, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 1 (best) BASIC

Gene NIPBL, Length 8,729 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-202ENST00000448238 TCF4P15884 667 aa9.37□□□□□ -0.91
NIPBL-202ENST00000448238 CNBD1Q8NA66 436 aa9.37□□□□□ -0.91
NIPBL-202ENST00000448238 RBBP8NLQ8NC74 664 aaPredicted RBP9.37□□□□□ -0.91
NIPBL-202ENST00000448238 JPH4Q96JJ6 628 aa9.37□□□□□ -0.91
NIPBL-202ENST00000448238 OSBPL11Q9BXB4 747 aa9.37□□□□□ -0.91
NIPBL-202ENST00000448238 VPS9D1Q9Y2B5 631 aa9.37□□□□□ -0.91
NIPBL-202ENST00000448238 CLPTM1O96005 669 aa9.36□□□□□ -0.91
NIPBL-202ENST00000448238 PAICSP22234 425 aaKnown RBP9.36□□□□□ -0.91
NIPBL-202ENST00000448238 ITGA3P26006 1051 aa9.36□□□□□ -0.91
NIPBL-202ENST00000448238 KCNK10P57789 538 aa9.36□□□□□ -0.91
NIPBL-202ENST00000448238 TFAMQ00059 246 aaKnown RBP9.36□□□□□ -0.91
NIPBL-202ENST00000448238 DCAF15Q66K64 600 aa9.36□□□□□ -0.91
NIPBL-202ENST00000448238 KSR2Q6VAB6 950 aa9.36□□□□□ -0.91
NIPBL-202ENST00000448238 ULK2Q8IYT8 1036 aa9.36□□□□□ -0.91
NIPBL-202ENST00000448238 ZNF786Q8N393 782 aa9.36□□□□□ -0.91
NIPBL-202ENST00000448238 C17orf53Q8N3J3 647 aaPredicted RBP9.36□□□□□ -0.91
NIPBL-202ENST00000448238 RIN3Q8TB24 985 aa9.36□□□□□ -0.91
NIPBL-202ENST00000448238 SGSM3Q96HU1 749 aa9.36□□□□□ -0.91
NIPBL-202ENST00000448238 ZFRQ96KR1 1074 aaKnown RBP9.36□□□□□ -0.91
NIPBL-202ENST00000448238 FAM227BQ96M60 508 aa9.36□□□□□ -0.91
NIPBL-202ENST00000448238 C1orf50Q9BV19 199 aa9.36□□□□□ -0.91
NIPBL-202ENST00000448238 PARD6BQ9BYG5 372 aa9.36□□□□□ -0.91
NIPBL-202ENST00000448238 SP110Q9HB58 689 aa9.36□□□□□ -0.91
NIPBL-202ENST00000448238 ABI2Q9NYB9 513 aaPredicted RBP9.36□□□□□ -0.91
NIPBL-202ENST00000448238 UBA6A0AVT1 1052 aaPredicted RBP9.36□□□□□ -0.91
NIPBL-202ENST00000448238 LRRC14BA6NHZ5 514 aa9.36□□□□□ -0.91
NIPBL-202ENST00000448238 TOM1O60784 492 aa9.36□□□□□ -0.91
NIPBL-202ENST00000448238 SRP72O76094 671 aaKnown RBP9.36□□□□□ -0.91
NIPBL-202ENST00000448238 TUBA3EQ6PEY2 450 aa9.36□□□□□ -0.91
NIPBL-202ENST00000448238 PRR23BQ6ZRT6 265 aa9.36□□□□□ -0.91
NIPBL-202ENST00000448238 EPHX4Q8IUS5 362 aa9.36□□□□□ -0.91
NIPBL-202ENST00000448238 GALNT4Q8N4A0 578 aa9.36□□□□□ -0.91
NIPBL-202ENST00000448238 CAMKK2Q96RR4 588 aa9.36□□□□□ -0.91
NIPBL-202ENST00000448238 AIFM2Q9BRQ8 373 aa9.36□□□□□ -0.91
NIPBL-202ENST00000448238 BLZF1Q9H2G9 400 aa9.36□□□□□ -0.91
NIPBL-202ENST00000448238 STAP1Q9ULZ2 295 aa9.36□□□□□ -0.91
NIPBL-202ENST00000448238 AOX1Q06278 1338 aa9.36□□□□□ -0.91
NIPBL-202ENST00000448238 CCDC88CQ9P219 2028 aa9.36□□□□□ -0.91
NIPBL-202ENST00000448238 SUPT6HQ7KZ85 1726 aaKnown RBP9.36□□□□□ -0.91
NIPBL-202ENST00000448238 ASB14A6NK59 587 aa9.36□□□□□ -0.91
NIPBL-202ENST00000448238 MBD4O95243 580 aa9.36□□□□□ -0.91
NIPBL-202ENST00000448238 MPOP05164 745 aa9.36□□□□□ -0.91
NIPBL-202ENST00000448238 ATP6V1B1P15313 513 aa9.36□□□□□ -0.91
NIPBL-202ENST00000448238 DGKKQ5KSL6 1271 aa9.36□□□□□ -0.91
NIPBL-202ENST00000448238 ZBTB33Q86T24 672 aa9.36□□□□□ -0.91
NIPBL-202ENST00000448238 MINDY2Q8NBR6 621 aa9.36□□□□□ -0.91
NIPBL-202ENST00000448238 VMP1Q96GC9 406 aa9.36□□□□□ -0.91
NIPBL-202ENST00000448238 DAPK2Q9UIK4 370 aa9.36□□□□□ -0.91
NIPBL-202ENST00000448238 DOLKQ9UPQ8 538 aa9.36□□□□□ -0.91
NIPBL-202ENST00000448238 SNX9Q9Y5X1 595 aa9.36□□□□□ -0.91
NIPBL-202ENST00000448238 GFPT2O94808 682 aa9.36□□□□□ -0.91
NIPBL-202ENST00000448238 ACLYP53396 1101 aa9.36□□□□□ -0.91
NIPBL-202ENST00000448238 PGBD2Q6P3X8 592 aa9.36□□□□□ -0.91
NIPBL-202ENST00000448238 NLRP14Q86W24 1093 aa9.36□□□□□ -0.91
NIPBL-202ENST00000448238 RNF135Q8IUD6 432 aa9.36□□□□□ -0.91
NIPBL-202ENST00000448238 SUPT20HQ8NEM7 779 aa9.36□□□□□ -0.91
NIPBL-202ENST00000448238 LINC00854A0A1B0GVQ3 168 aa9.36□□□□□ -0.91
NIPBL-202ENST00000448238 PRODHO43272 600 aa9.36□□□□□ -0.91
NIPBL-202ENST00000448238 SEMA3DO95025 777 aa9.36□□□□□ -0.91
NIPBL-202ENST00000448238 ENO1P06733 434 aaKnown RBP9.36□□□□□ -0.91
NIPBL-202ENST00000448238 PPP3CCP48454 512 aa9.36□□□□□ -0.91
NIPBL-202ENST00000448238 RPS6P62753 249 aaKnown RBP9.36□□□□□ -0.91
NIPBL-202ENST00000448238 LPIN1Q14693 890 aa9.36□□□□□ -0.91
NIPBL-202ENST00000448238 STAT4Q14765 748 aa9.36□□□□□ -0.91
NIPBL-202ENST00000448238 UBE2Q1Q7Z7E8 422 aa9.36□□□□□ -0.91
NIPBL-202ENST00000448238 TRIM66O15016 1216 aa9.36□□□□□ -0.91
NIPBL-202ENST00000448238 CAND2O75155 1236 aa9.36□□□□□ -0.91
NIPBL-202ENST00000448238 PLCG1P19174 1290 aa9.36□□□□□ -0.91
NIPBL-202ENST00000448238 DNAJC3Q13217 504 aa9.36□□□□□ -0.91
NIPBL-202ENST00000448238 DGUOKQ16854 277 aa9.36□□□□□ -0.91
NIPBL-202ENST00000448238 C4orf46Q504U0 113 aa9.36□□□□□ -0.91
NIPBL-202ENST00000448238 LONP2Q86WA8 852 aa9.36□□□□□ -0.91
NIPBL-202ENST00000448238 MMGT1Q8N4V1 131 aa9.36□□□□□ -0.91
NIPBL-202ENST00000448238 IL17RAQ96F46 866 aa9.36□□□□□ -0.91
NIPBL-202ENST00000448238 AP5M1Q9H0R1 490 aa9.36□□□□□ -0.91
NIPBL-202ENST00000448238 ANAPC2Q9UJX6 822 aa9.36□□□□□ -0.91
NIPBL-202ENST00000448238 PCDHGA4Q9Y5G9 962 aa9.36□□□□□ -0.91
NIPBL-202ENST00000448238 KMOO15229 486 aa9.36□□□□□ -0.91
NIPBL-202ENST00000448238 SNUPNO95149 360 aaKnown RBP9.36□□□□□ -0.91
NIPBL-202ENST00000448238 RPS6KA3P51812 740 aa9.36□□□□□ -0.91
NIPBL-202ENST00000448238 CHRNB3Q05901 458 aa9.36□□□□□ -0.91
NIPBL-202ENST00000448238 TYW3Q6IPR3 259 aaKnown RBP9.36□□□□□ -0.91
NIPBL-202ENST00000448238 SYTL5Q8TDW5 730 aaPredicted RBP9.36□□□□□ -0.91
NIPBL-202ENST00000448238 GAL3ST3Q96A11 431 aa9.36□□□□□ -0.91
NIPBL-202ENST00000448238 ZNF318Q5VUA4 2279 aa9.36□□□□□ -0.91
NIPBL-202ENST00000448238 PTPRGP23470 1445 aa9.36□□□□□ -0.91
NIPBL-202ENST00000448238 CCDC182A6NF36 153 aa9.35□□□□□ -0.91
NIPBL-202ENST00000448238 ZMYND10O75800 440 aa9.35□□□□□ -0.91
NIPBL-202ENST00000448238 GSPT1P15170 499 aaKnown RBP9.35□□□□□ -0.91
NIPBL-202ENST00000448238 CMA1P23946 247 aa9.35□□□□□ -0.91
NIPBL-202ENST00000448238 CSNK2BP67870 215 aa9.35□□□□□ -0.91
NIPBL-202ENST00000448238 CCNA1P78396 465 aa9.35□□□□□ -0.91
NIPBL-202ENST00000448238 LRRC36Q1X8D7 754 aa9.35□□□□□ -0.91
NIPBL-202ENST00000448238 OOSP2Q86WS3 158 aa9.35□□□□□ -0.91
NIPBL-202ENST00000448238 PPM1NQ8N819 430 aa9.35□□□□□ -0.91
NIPBL-202ENST00000448238 GJA10Q969M2 543 aa9.35□□□□□ -0.91
NIPBL-202ENST00000448238 DGCR14Q96DF8 476 aaKnown RBP9.35□□□□□ -0.91
NIPBL-202ENST00000448238 EPB41L4BQ9H329 900 aa9.35□□□□□ -0.91
NIPBL-202ENST00000448238 POLG2Q9UHN1 485 aa9.35□□□□□ -0.91
NIPBL-202ENST00000448238 RTCBQ9Y3I0 505 aaKnown RBP9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms