RNA–Protein interactions for RNA: ENST00000448192.1

DDX56-207, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 691 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-207ENST00000448192 TMEM189-UBE2V1I3L0A0 370 aa19.36■□□□□ 0.69
DDX56-207ENST00000448192 CLDN3O15551 220 aa19.36■□□□□ 0.69
DDX56-207ENST00000448192 BRD1O95696 1058 aa19.36■□□□□ 0.69
DDX56-207ENST00000448192 ASGR2P07307 311 aa19.36■□□□□ 0.69
DDX56-207ENST00000448192 NCKAP1LP55160 1127 aa19.36■□□□□ 0.69
DDX56-207ENST00000448192 SOX4Q06945 474 aaPredicted RBP19.36■□□□□ 0.69
DDX56-207ENST00000448192 XKR4Q5GH76 650 aa19.36■□□□□ 0.69
DDX56-207ENST00000448192 LILRA6Q6PI73 481 aa19.36■□□□□ 0.69
DDX56-207ENST00000448192 USP49Q70CQ1 688 aa19.36■□□□□ 0.69
DDX56-207ENST00000448192 OTOP3Q7RTS5 596 aa19.36■□□□□ 0.69
DDX56-207ENST00000448192 SMG7Q92540 1137 aaKnown RBP19.36■□□□□ 0.69
DDX56-207ENST00000448192 LARP4BQ92615 738 aaKnown RBP19.36■□□□□ 0.69
DDX56-207ENST00000448192 ZMAT2Q96NC0 199 aaKnown RBP19.36■□□□□ 0.69
DDX56-207ENST00000448192 CLSTN3Q9BQT9 956 aa19.36■□□□□ 0.69
DDX56-207ENST00000448192 CCSER1Q9C0I3 900 aa19.36■□□□□ 0.69
DDX56-207ENST00000448192 PIDD1Q9HB75 910 aa19.36■□□□□ 0.69
DDX56-207ENST00000448192 SORCS3Q9UPU3 1222 aa19.36■□□□□ 0.69
DDX56-207ENST00000448192 ARIH1Q9Y4X5 557 aaPredicted RBP19.36■□□□□ 0.69
DDX56-207ENST00000448192 I3L4J1 428 aa19.35■□□□□ 0.69
DDX56-207ENST00000448192 TRAPPC3O43617 180 aa19.35■□□□□ 0.69
DDX56-207ENST00000448192 C1RP00736 705 aa19.35■□□□□ 0.69
DDX56-207ENST00000448192 PLA2G5P39877 138 aa19.35■□□□□ 0.69
DDX56-207ENST00000448192 MTMR3Q13615 1198 aa19.35■□□□□ 0.69
DDX56-207ENST00000448192 PDXDC1Q6P996 788 aa19.35■□□□□ 0.69
DDX56-207ENST00000448192 PDZRN4Q6ZMN7 1036 aaPredicted RBP19.35■□□□□ 0.69
DDX56-207ENST00000448192 BMP8AQ7Z5Y6 402 aa19.35■□□□□ 0.69
DDX56-207ENST00000448192 C3orf58Q8NDZ4 430 aa19.35■□□□□ 0.69
DDX56-207ENST00000448192 PARVGQ9HBI0 331 aa19.35■□□□□ 0.69
DDX56-207ENST00000448192 FBXO2Q9UK22 296 aaPredicted RBP19.35■□□□□ 0.69
DDX56-207ENST00000448192 MTMR6Q9Y217 621 aa19.35■□□□□ 0.69
DDX56-207ENST00000448192 MYH15Q9Y2K3 1946 aa19.34■□□□□ 0.69
DDX56-207ENST00000448192 K7ENM7 598 aa19.34■□□□□ 0.69
DDX56-207ENST00000448192 TBCAO75347 108 aaKnown RBP19.34■□□□□ 0.69
DDX56-207ENST00000448192 KCNE1P15382 129 aa19.34■□□□□ 0.69
DDX56-207ENST00000448192 FGFR3P22607 806 aa19.34■□□□□ 0.69
DDX56-207ENST00000448192 DDIT3P35638 169 aa19.34■□□□□ 0.69
DDX56-207ENST00000448192 BRCC3P46736 316 aa19.34■□□□□ 0.69
DDX56-207ENST00000448192 LIG4P49917 911 aa19.34■□□□□ 0.69
DDX56-207ENST00000448192 MCL1Q07820 350 aa19.34■□□□□ 0.69
DDX56-207ENST00000448192 CD300LGQ6UXG3 332 aa19.34■□□□□ 0.69
DDX56-207ENST00000448192 CYP26C1Q6V0L0 522 aa19.34■□□□□ 0.69
DDX56-207ENST00000448192 C18orf25Q96B23 403 aaPredicted RBP19.34■□□□□ 0.69
DDX56-207ENST00000448192 ZNF707Q96C28 371 aaPredicted RBP19.34■□□□□ 0.69
DDX56-207ENST00000448192 DDX27Q96GQ7 796 aaKnown RBP19.34■□□□□ 0.69
DDX56-207ENST00000448192 CLIC6Q96NY7 704 aa19.34■□□□□ 0.69
DDX56-207ENST00000448192 WDR6Q9NNW5 1121 aaKnown RBP19.34■□□□□ 0.69
DDX56-207ENST00000448192 CNTN3Q9P232 1028 aa19.34■□□□□ 0.69
DDX56-207ENST00000448192 CCDC39Q9UFE4 941 aa19.34■□□□□ 0.69
DDX56-207ENST00000448192 SRPRBQ9Y5M8 271 aaKnown RBP19.34■□□□□ 0.69
DDX56-207ENST00000448192 PODXLO00592 558 aa19.33■□□□□ 0.68
DDX56-207ENST00000448192 HNRNPDLO14979 420 aaKnown RBP19.33■□□□□ 0.68
DDX56-207ENST00000448192 MEFVO15553 781 aaPredicted RBP19.33■□□□□ 0.68
DDX56-207ENST00000448192 ADAM12O43184 909 aa19.33■□□□□ 0.68
DDX56-207ENST00000448192 STX6O43752 255 aa19.33■□□□□ 0.68
DDX56-207ENST00000448192 TRAK2O60296 914 aa19.33■□□□□ 0.68
DDX56-207ENST00000448192 TKTP29401 623 aaKnown RBP19.33■□□□□ 0.68
DDX56-207ENST00000448192 GBP2P32456 591 aaPredicted RBP19.33■□□□□ 0.68
DDX56-207ENST00000448192 OR1D2P34982 312 aa19.33■□□□□ 0.68
DDX56-207ENST00000448192 ZNF131P52739 623 aa19.33■□□□□ 0.68
DDX56-207ENST00000448192 SLC10A6Q3KNW5 377 aa19.33■□□□□ 0.68
DDX56-207ENST00000448192 SUGP1Q8IWZ8 645 aaKnown RBP19.33■□□□□ 0.68
DDX56-207ENST00000448192 UBALD2Q8IYN6 164 aa19.33■□□□□ 0.68
DDX56-207ENST00000448192 STAMQ92783 540 aa19.33■□□□□ 0.68
DDX56-207ENST00000448192 RHOBTB2Q9BYZ6 727 aa19.33■□□□□ 0.68
DDX56-207ENST00000448192 PRKD2Q9BZL6 878 aa19.33■□□□□ 0.68
DDX56-207ENST00000448192 HAPLN2Q9GZV7 340 aa19.33■□□□□ 0.68
DDX56-207ENST00000448192 SMOC2Q9H3U7 446 aa19.33■□□□□ 0.68
DDX56-207ENST00000448192 ZDHHC7Q9NXF8 308 aa19.33■□□□□ 0.68
DDX56-207ENST00000448192 TBX20Q9UMR3 447 aa19.33■□□□□ 0.68
DDX56-207ENST00000448192 WDFY4Q6ZS81 3184 aa19.33■□□□□ 0.68
DDX56-207ENST00000448192 CLUHO75153 1309 aa19.32■□□□□ 0.68
DDX56-207ENST00000448192 ZMYND10O75800 440 aa19.32■□□□□ 0.68
DDX56-207ENST00000448192 CXCL8P10145 99 aa19.32■□□□□ 0.68
DDX56-207ENST00000448192 TXLNAP40222 546 aa19.32■□□□□ 0.68
DDX56-207ENST00000448192 LIN9Q5TKA1 542 aa19.32■□□□□ 0.68
DDX56-207ENST00000448192 FBXL6Q8N531 539 aa19.32■□□□□ 0.68
DDX56-207ENST00000448192 KRI1Q8N9T8 703 aaKnown RBP19.32■□□□□ 0.68
DDX56-207ENST00000448192 ASIC4Q96FT7 647 aa19.32■□□□□ 0.68
DDX56-207ENST00000448192 USP28Q96RU2 1077 aa19.32■□□□□ 0.68
DDX56-207ENST00000448192 ZSCAN16Q9H4T2 348 aaPredicted RBP19.32■□□□□ 0.68
DDX56-207ENST00000448192 FBXW11Q9UKB1 542 aa19.32■□□□□ 0.68
DDX56-207ENST00000448192 CLTAP09496 248 aa19.31■□□□□ 0.68
DDX56-207ENST00000448192 SCP2P22307 547 aa19.31■□□□□ 0.68
DDX56-207ENST00000448192 NMT1P30419 496 aaKnown RBP19.31■□□□□ 0.68
DDX56-207ENST00000448192 RPL9P32969 192 aaKnown RBP19.31■□□□□ 0.68
DDX56-207ENST00000448192 SPAG1Q07617 926 aa19.31■□□□□ 0.68
DDX56-207ENST00000448192 PPM1LQ5SGD2 360 aa19.31■□□□□ 0.68
DDX56-207ENST00000448192 RRAGBQ5VZM2 374 aa19.31■□□□□ 0.68
DDX56-207ENST00000448192 ANKS3Q6ZW76 656 aa19.31■□□□□ 0.68
DDX56-207ENST00000448192 DYMQ7RTS9 669 aa19.31■□□□□ 0.68
DDX56-207ENST00000448192 MTRRQ9UBK8 725 aa19.31■□□□□ 0.68
DDX56-207ENST00000448192 STK17AQ9UEE5 414 aa19.31■□□□□ 0.68
DDX56-207ENST00000448192 NUB1Q9Y5A7 615 aa19.31■□□□□ 0.68
DDX56-207ENST00000448192 CDY1Q9Y6F8 540 aa19.31■□□□□ 0.68
DDX56-207ENST00000448192 ZNF318Q5VUA4 2279 aa19.31■□□□□ 0.68
DDX56-207ENST00000448192 DOCK6Q96HP0 2047 aa19.3■□□□□ 0.68
DDX56-207ENST00000448192 N4BP1O75113 896 aaKnown RBP19.3■□□□□ 0.68
DDX56-207ENST00000448192 C8AP07357 584 aa19.3■□□□□ 0.68
DDX56-207ENST00000448192 TNFSF9P41273 254 aa19.3■□□□□ 0.68
DDX56-207ENST00000448192 RAB33AQ14088 237 aa19.3■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms