RNA–Protein interactions for RNA: ENST00000447734.5

PMS1-216, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 5

Gene PMS1, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-216ENST00000447734 MANSC1Q9H8J5 431 aa4.4□□□□□ -1.71
PMS1-216ENST00000447734 SH3GLB2Q9NR46 395 aa4.4□□□□□ -1.71
PMS1-216ENST00000447734 ANKEF1Q9NU02 776 aa4.4□□□□□ -1.71
PMS1-216ENST00000447734 UCKL1Q9NWZ5 548 aa4.4□□□□□ -1.71
PMS1-216ENST00000447734 NSMCE4AQ9NXX6 385 aa4.4□□□□□ -1.71
PMS1-216ENST00000447734 TNFRSF10DQ9UBN6 386 aa4.4□□□□□ -1.71
PMS1-216ENST00000447734 FBLN5Q9UBX5 448 aa4.4□□□□□ -1.71
PMS1-216ENST00000447734 PCDHA1Q9Y5I3 950 aa4.4□□□□□ -1.71
PMS1-216ENST00000447734 A0A087X0M5 115 aa4.39□□□□□ -1.71
PMS1-216ENST00000447734 A0A1B0GX30 115 aa4.39□□□□□ -1.71
PMS1-216ENST00000447734 A0A1W2PQ45 241 aaPredicted RBP4.39□□□□□ -1.71
PMS1-216ENST00000447734 A0A1W2PQY0 241 aa4.39□□□□□ -1.71
PMS1-216ENST00000447734 FAM170AA1A519 330 aa4.39□□□□□ -1.71
PMS1-216ENST00000447734 FAM234BA2RU67 622 aa4.39□□□□□ -1.71
PMS1-216ENST00000447734 SYNDIG1LA6NDD5 238 aa4.39□□□□□ -1.71
PMS1-216ENST00000447734 FADS2P1A8MWK0 482 aa4.39□□□□□ -1.71
PMS1-216ENST00000447734 ENDOD1O94919 500 aa4.39□□□□□ -1.71
PMS1-216ENST00000447734 TNFRSF6BO95407 300 aa4.39□□□□□ -1.71
PMS1-216ENST00000447734 SYN1P17600 705 aa4.39□□□□□ -1.71
PMS1-216ENST00000447734 CTSSP25774 331 aa4.39□□□□□ -1.71
PMS1-216ENST00000447734 STAT5AP42229 794 aa4.39□□□□□ -1.71
PMS1-216ENST00000447734 CLCN7P51798 805 aa4.39□□□□□ -1.71
PMS1-216ENST00000447734 ATXN1P54253 815 aaKnown RBP4.39□□□□□ -1.71
PMS1-216ENST00000447734 NR1H2P55055 460 aa4.39□□□□□ -1.71
PMS1-216ENST00000447734 ZBED6P86452 979 aa4.39□□□□□ -1.71
PMS1-216ENST00000447734 FOXO4P98177 505 aa4.39□□□□□ -1.71
PMS1-216ENST00000447734 MAPK7Q13164 816 aa4.39□□□□□ -1.71
PMS1-216ENST00000447734 RAB39AQ14964 217 aa4.39□□□□□ -1.71
PMS1-216ENST00000447734 PLCL1Q15111 1095 aa4.39□□□□□ -1.71
PMS1-216ENST00000447734 SURF1Q15526 300 aa4.39□□□□□ -1.71
PMS1-216ENST00000447734 RAB30Q15771 203 aa4.39□□□□□ -1.71
PMS1-216ENST00000447734 GJC2Q5T442 439 aaPredicted RBP4.39□□□□□ -1.71
PMS1-216ENST00000447734 TANGO2Q6ICL3 276 aa4.39□□□□□ -1.71
PMS1-216ENST00000447734 LIN54Q6MZP7 749 aa4.39□□□□□ -1.71
PMS1-216ENST00000447734 CATSPERGQ6ZRH7 1159 aa4.39□□□□□ -1.71
PMS1-216ENST00000447734 ZAR1Q86SH2 424 aa4.39□□□□□ -1.71
PMS1-216ENST00000447734 SLCO6A1Q86UG4 719 aa4.39□□□□□ -1.71
PMS1-216ENST00000447734 CABP7Q86V35 215 aa4.39□□□□□ -1.71
PMS1-216ENST00000447734 CPOQ8IVL8 374 aa4.39□□□□□ -1.71
PMS1-216ENST00000447734 SPACA3Q8IXA5 215 aa4.39□□□□□ -1.71
PMS1-216ENST00000447734 TCP11L2Q8N4U5 519 aa4.39□□□□□ -1.71
PMS1-216ENST00000447734 OR6B3Q8NGW1 331 aa4.39□□□□□ -1.71
PMS1-216ENST00000447734 DDX55Q8NHQ9 600 aaKnown RBP eCLIP4.39□□□□□ -1.71
PMS1-216ENST00000447734 STT3BQ8TCJ2 826 aa4.39□□□□□ -1.71
PMS1-216ENST00000447734 ADAMTS18Q8TE60 1221 aa4.39□□□□□ -1.71
PMS1-216ENST00000447734 HERVK_113Q902F9 699 aa4.39□□□□□ -1.71
PMS1-216ENST00000447734 SEC14L1Q92503 715 aa4.39□□□□□ -1.71
PMS1-216ENST00000447734 RILPL2Q969X0 211 aa4.39□□□□□ -1.71
PMS1-216ENST00000447734 RRP36Q96EU6 259 aaKnown RBP4.39□□□□□ -1.71
PMS1-216ENST00000447734 MAP6Q96JE9 813 aa4.39□□□□□ -1.71
PMS1-216ENST00000447734 TMX3Q96JJ7 454 aa4.39□□□□□ -1.71
PMS1-216ENST00000447734 MRGPRX4Q96LA9 322 aa4.39□□□□□ -1.71
PMS1-216ENST00000447734 MRGPRX1Q96LB2 322 aa4.39□□□□□ -1.71
PMS1-216ENST00000447734 TIGD1Q96MW7 591 aa4.39□□□□□ -1.71
PMS1-216ENST00000447734 DMRTA2Q96SC8 542 aa4.39□□□□□ -1.71
PMS1-216ENST00000447734 TREX2Q9BQ50 279 aaPredicted RBP4.39□□□□□ -1.71
PMS1-216ENST00000447734 PDGFDQ9GZP0 370 aaPredicted RBP4.39□□□□□ -1.71
PMS1-216ENST00000447734 AP5M1Q9H0R1 490 aa4.39□□□□□ -1.71
PMS1-216ENST00000447734 DHX36Q9H2U1 1008 aaKnown RBP4.39□□□□□ -1.71
PMS1-216ENST00000447734 SAYSD1Q9NPB0 183 aa4.39□□□□□ -1.71
PMS1-216ENST00000447734 BTBD7Q9P203 1132 aa4.39□□□□□ -1.71
PMS1-216ENST00000447734 FTSJ1Q9UET6 329 aa4.39□□□□□ -1.71
PMS1-216ENST00000447734 GPR34Q9UPC5 381 aa4.39□□□□□ -1.71
PMS1-216ENST00000447734 A0A0B4J269 797 aa4.38□□□□□ -1.71
PMS1-216ENST00000447734 CCDC196A0A1B0GTZ2 297 aa4.38□□□□□ -1.71
PMS1-216ENST00000447734 A0A1W2PQJ5 194 aa4.38□□□□□ -1.71
PMS1-216ENST00000447734 TCRBV5S2A0A599 114 aa4.38□□□□□ -1.71
PMS1-216ENST00000447734 HMX2A2RU54 273 aa4.38□□□□□ -1.71
PMS1-216ENST00000447734 F5H0A9 414 aaPredicted RBP4.38□□□□□ -1.71
PMS1-216ENST00000447734 PIP5K1BO14986 540 aa4.38□□□□□ -1.71
PMS1-216ENST00000447734 AKR1B10O60218 316 aa4.38□□□□□ -1.71
PMS1-216ENST00000447734 TBC1D4O60343 1298 aa4.38□□□□□ -1.71
PMS1-216ENST00000447734 NDST3O95803 873 aa4.38□□□□□ -1.71
PMS1-216ENST00000447734 MT-ND5P03915 603 aa4.38□□□□□ -1.71
PMS1-216ENST00000447734 HNRNPLP14866 589 aaKnown RBP eCLIP4.38□□□□□ -1.712e-11■■■□□ 14.6
PMS1-216ENST00000447734 ALOX15P16050 662 aaPredicted RBP4.38□□□□□ -1.71
PMS1-216ENST00000447734 FAHP16930 419 aa4.38□□□□□ -1.71
PMS1-216ENST00000447734 MALP21145 153 aa4.38□□□□□ -1.71
PMS1-216ENST00000447734 OXCT1P55809 520 aa4.38□□□□□ -1.71
PMS1-216ENST00000447734 CYP27A1Q02318 531 aa4.38□□□□□ -1.71
PMS1-216ENST00000447734 MGAT5Q09328 741 aa4.38□□□□□ -1.71
PMS1-216ENST00000447734 DBPQ10586 325 aaPredicted RBP4.38□□□□□ -1.71
PMS1-216ENST00000447734 TARDBPQ13148 414 aaKnown RBP eCLIP4.38□□□□□ -1.71
PMS1-216ENST00000447734 SNAPC2Q13487 334 aa4.38□□□□□ -1.71
PMS1-216ENST00000447734 EFR3AQ14156 821 aa4.38□□□□□ -1.71
PMS1-216ENST00000447734 KRT32Q14532 448 aa4.38□□□□□ -1.71
PMS1-216ENST00000447734 DLGAP5Q15398 846 aa4.38□□□□□ -1.71
PMS1-216ENST00000447734 MEA1Q16626 185 aa4.38□□□□□ -1.71
PMS1-216ENST00000447734 AOC3Q16853 763 aa4.38□□□□□ -1.71
PMS1-216ENST00000447734 CFAP58Q5T655 872 aa4.38□□□□□ -1.71
PMS1-216ENST00000447734 MFSD4BQ5TF39 518 aa4.38□□□□□ -1.71
PMS1-216ENST00000447734 RNF44Q7L0R7 432 aa4.38□□□□□ -1.71
PMS1-216ENST00000447734 ENOSF1Q7L5Y1 443 aa4.38□□□□□ -1.71
PMS1-216ENST00000447734 FAM129CQ86XR2 697 aa4.38□□□□□ -1.71
PMS1-216ENST00000447734 SIAH1Q8IUQ4 282 aa4.38□□□□□ -1.71
PMS1-216ENST00000447734 ANKRD52Q8NB46 1076 aa4.38□□□□□ -1.71
PMS1-216ENST00000447734 GPR156Q8NFN8 814 aa4.38□□□□□ -1.71
PMS1-216ENST00000447734 TTLL11Q8NHH1 800 aa4.38□□□□□ -1.71
PMS1-216ENST00000447734 KBTBD7Q8WVZ9 684 aa4.38□□□□□ -1.71
PMS1-216ENST00000447734 NELL1Q92832 810 aa4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms