RNA–Protein interactions for RNA: ENST00000447199.1

SPTLC1P1-201, Transcript of serine palmitoyltransferase long chain base subunit 1 pseudogene 1, humanhuman

BASIC

Gene SPTLC1P1, Length 261 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1P1-201ENST00000447199 AVPR2P30518 371 aa17.37■□□□□ 0.37
SPTLC1P1-201ENST00000447199 YARSP54577 528 aaKnown RBP17.37■□□□□ 0.37
SPTLC1P1-201ENST00000447199 OSTNP61366 133 aa17.37■□□□□ 0.37
SPTLC1P1-201ENST00000447199 TCF15Q12870 199 aa17.37■□□□□ 0.37
SPTLC1P1-201ENST00000447199 PDXDC1Q6P996 788 aa17.37■□□□□ 0.37
SPTLC1P1-201ENST00000447199 CEP57Q86XR8 500 aa17.37■□□□□ 0.37
SPTLC1P1-201ENST00000447199 STAMQ92783 540 aa17.37■□□□□ 0.37
SPTLC1P1-201ENST00000447199 MYADMQ96S97 322 aa17.37■□□□□ 0.37
SPTLC1P1-201ENST00000447199 BLOC1S4Q9NUP1 217 aa17.37■□□□□ 0.37
SPTLC1P1-201ENST00000447199 KCNG1Q9UIX4 513 aa17.37■□□□□ 0.37
SPTLC1P1-201ENST00000447199 BMP15O95972 392 aa17.36■□□□□ 0.37
SPTLC1P1-201ENST00000447199 NCKAP1LP55160 1127 aa17.36■□□□□ 0.37
SPTLC1P1-201ENST00000447199 CACNB1Q02641 598 aaPredicted RBP17.36■□□□□ 0.37
SPTLC1P1-201ENST00000447199 TDGQ13569 410 aa17.36■□□□□ 0.37
SPTLC1P1-201ENST00000447199 RAB33AQ14088 237 aa17.36■□□□□ 0.37
SPTLC1P1-201ENST00000447199 RSPO2Q6UXX9 243 aaPredicted RBP17.36■□□□□ 0.37
SPTLC1P1-201ENST00000447199 ZPBP2Q6X784 338 aa17.36■□□□□ 0.37
SPTLC1P1-201ENST00000447199 CDK5RAP3Q96JB5 506 aa17.36■□□□□ 0.37
SPTLC1P1-201ENST00000447199 ACAP3Q96P50 834 aa17.36■□□□□ 0.37
SPTLC1P1-201ENST00000447199 PRRX2Q99811 253 aa17.36■□□□□ 0.37
SPTLC1P1-201ENST00000447199 HAPLN2Q9GZV7 340 aa17.36■□□□□ 0.37
SPTLC1P1-201ENST00000447199 MTRRQ9UBK8 725 aa17.36■□□□□ 0.37
SPTLC1P1-201ENST00000447199 VPS13AQ96RL7 3174 aa17.36■□□□□ 0.37
SPTLC1P1-201ENST00000447199 VWA8A3KMH1 1905 aa17.35■□□□□ 0.37
SPTLC1P1-201ENST00000447199 I3L4J1 428 aa17.35■□□□□ 0.37
SPTLC1P1-201ENST00000447199 TKTP29401 623 aaKnown RBP17.35■□□□□ 0.37
SPTLC1P1-201ENST00000447199 HOXA9P31269 272 aa17.35■□□□□ 0.37
SPTLC1P1-201ENST00000447199 LONP1P36776 959 aaKnown RBP17.35■□□□□ 0.37
SPTLC1P1-201ENST00000447199 ZNF131P52739 623 aa17.35■□□□□ 0.37
SPTLC1P1-201ENST00000447199 SMTNP53814 917 aa17.35■□□□□ 0.37
SPTLC1P1-201ENST00000447199 MCL1Q07820 350 aa17.35■□□□□ 0.37
SPTLC1P1-201ENST00000447199 STRN3Q13033 797 aa17.35■□□□□ 0.37
SPTLC1P1-201ENST00000447199 NOLC1Q14978 699 aaKnown RBP eCLIP17.35■□□□□ 0.37
SPTLC1P1-201ENST00000447199 SF3A1Q15459 793 aaKnown RBP17.35■□□□□ 0.37
SPTLC1P1-201ENST00000447199 SLC10A6Q3KNW5 377 aa17.35■□□□□ 0.37
SPTLC1P1-201ENST00000447199 DDX27Q96GQ7 796 aaKnown RBP17.35■□□□□ 0.37
SPTLC1P1-201ENST00000447199 REEP2Q9BRK0 252 aa17.35■□□□□ 0.37
SPTLC1P1-201ENST00000447199 TCHPQ9BT92 498 aa17.35■□□□□ 0.37
SPTLC1P1-201ENST00000447199 SLC38A7Q9NVC3 462 aa17.35■□□□□ 0.37
SPTLC1P1-201ENST00000447199 IGSF9Q9P2J2 1179 aa17.35■□□□□ 0.37
SPTLC1P1-201ENST00000447199 ODF2LQ9ULJ1 636 aa17.35■□□□□ 0.37
SPTLC1P1-201ENST00000447199 DUSP12Q9UNI6 340 aa17.35■□□□□ 0.37
SPTLC1P1-201ENST00000447199 BACE2Q9Y5Z0 518 aa17.35■□□□□ 0.37
SPTLC1P1-201ENST00000447199 PODXLO00592 558 aa17.34■□□□□ 0.37
SPTLC1P1-201ENST00000447199 C8AP07357 584 aa17.34■□□□□ 0.37
SPTLC1P1-201ENST00000447199 POU2F2P09086 479 aa17.34■□□□□ 0.37
SPTLC1P1-201ENST00000447199 HNRNPA1P09651 372 aaKnown RBP eCLIP17.34■□□□□ 0.37
SPTLC1P1-201ENST00000447199 OR1D2P34982 312 aa17.34■□□□□ 0.37
SPTLC1P1-201ENST00000447199 UBA7P41226 1012 aa17.34■□□□□ 0.37
SPTLC1P1-201ENST00000447199 BRCC3P46736 316 aa17.34■□□□□ 0.37
SPTLC1P1-201ENST00000447199 PTPN5P54829 565 aa17.34■□□□□ 0.37
SPTLC1P1-201ENST00000447199 C18orf25Q96B23 403 aaPredicted RBP17.34■□□□□ 0.37
SPTLC1P1-201ENST00000447199 CALML4Q96GE6 196 aa17.34■□□□□ 0.37
SPTLC1P1-201ENST00000447199 LARSQ9P2J5 1176 aaKnown RBP17.34■□□□□ 0.37
SPTLC1P1-201ENST00000447199 ANKFY1Q9P2R3 1169 aa17.34■□□□□ 0.37
SPTLC1P1-201ENST00000447199 MTCL1Q9Y4B5 1905 aaKnown RBP17.34■□□□□ 0.37
SPTLC1P1-201ENST00000447199 TRAPPC3O43617 180 aa17.33■□□□□ 0.36
SPTLC1P1-201ENST00000447199 FAM189A1O60320 539 aa17.33■□□□□ 0.36
SPTLC1P1-201ENST00000447199 TBC1D4O60343 1298 aa17.33■□□□□ 0.36
SPTLC1P1-201ENST00000447199 HARSP12081 509 aaKnown RBP17.33■□□□□ 0.36
SPTLC1P1-201ENST00000447199 LAMP2P13473 410 aa17.33■□□□□ 0.36
SPTLC1P1-201ENST00000447199 PLCG1P19174 1290 aa17.33■□□□□ 0.36
SPTLC1P1-201ENST00000447199 GBP2P32456 591 aaPredicted RBP17.33■□□□□ 0.36
SPTLC1P1-201ENST00000447199 RPL9P32969 192 aaKnown RBP17.33■□□□□ 0.36
SPTLC1P1-201ENST00000447199 NUBP1P53384 320 aa17.33■□□□□ 0.36
SPTLC1P1-201ENST00000447199 KARSQ15046 597 aaKnown RBP17.33■□□□□ 0.36
SPTLC1P1-201ENST00000447199 PTPAQ15257 358 aa17.33■□□□□ 0.36
SPTLC1P1-201ENST00000447199 SEZ6Q53EL9 994 aa17.33■□□□□ 0.36
SPTLC1P1-201ENST00000447199 ANKS3Q6ZW76 656 aa17.33■□□□□ 0.36
SPTLC1P1-201ENST00000447199 HAUS6Q7Z4H7 955 aa17.33■□□□□ 0.36
SPTLC1P1-201ENST00000447199 ALYREFQ86V81 257 aaKnown RBP17.33■□□□□ 0.36
SPTLC1P1-201ENST00000447199 GPBP1Q86WP2 473 aa17.33■□□□□ 0.36
SPTLC1P1-201ENST00000447199 TMEM105Q8N8V8 129 aa17.33■□□□□ 0.36
SPTLC1P1-201ENST00000447199 RSAD2Q8WXG1 361 aa17.33■□□□□ 0.36
SPTLC1P1-201ENST00000447199 RAD54LQ92698 747 aa17.33■□□□□ 0.36
SPTLC1P1-201ENST00000447199 FIZ1Q96SL8 496 aa17.33■□□□□ 0.36
SPTLC1P1-201ENST00000447199 PIDD1Q9HB75 910 aa17.33■□□□□ 0.36
SPTLC1P1-201ENST00000447199 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP17.33■□□□□ 0.36
SPTLC1P1-201ENST00000447199 CDY1Q9Y6F8 540 aa17.33■□□□□ 0.36
SPTLC1P1-201ENST00000447199 DOCK8Q8NF50 2099 aa17.32■□□□□ 0.36
SPTLC1P1-201ENST00000447199 ANHXE9PGG2 379 aa17.32■□□□□ 0.36
SPTLC1P1-201ENST00000447199 H0YCG3 227 aa17.32■□□□□ 0.36
SPTLC1P1-201ENST00000447199 CLDN3O15551 220 aa17.32■□□□□ 0.36
SPTLC1P1-201ENST00000447199 NARSO43776 548 aaKnown RBP17.32■□□□□ 0.36
SPTLC1P1-201ENST00000447199 PIGRP01833 764 aa17.32■□□□□ 0.36
SPTLC1P1-201ENST00000447199 PDCP20941 246 aa17.32■□□□□ 0.36
SPTLC1P1-201ENST00000447199 MRE11P49959 708 aa17.32■□□□□ 0.36
SPTLC1P1-201ENST00000447199 MRPL58Q14197 206 aaKnown RBP17.32■□□□□ 0.36
SPTLC1P1-201ENST00000447199 MCM6Q14566 821 aa17.32■□□□□ 0.36
SPTLC1P1-201ENST00000447199 UVSSAQ2YD98 709 aa17.32■□□□□ 0.36
SPTLC1P1-201ENST00000447199 AXDND1Q5T1B0 1012 aaPredicted RBP17.32■□□□□ 0.36
SPTLC1P1-201ENST00000447199 LIN9Q5TKA1 542 aa17.32■□□□□ 0.36
SPTLC1P1-201ENST00000447199 SLC8B1Q6J4K2 584 aa17.32■□□□□ 0.36
SPTLC1P1-201ENST00000447199 RTL10Q7L3V2 364 aa17.32■□□□□ 0.36
SPTLC1P1-201ENST00000447199 GRASPQ7Z6J2 395 aaPredicted RBP17.32■□□□□ 0.36
SPTLC1P1-201ENST00000447199 SLC7A14Q8TBB6 771 aa17.32■□□□□ 0.36
SPTLC1P1-201ENST00000447199 NXPE3Q969Y0 559 aa17.32■□□□□ 0.36
SPTLC1P1-201ENST00000447199 PHOX2BQ99453 314 aa17.32■□□□□ 0.36
SPTLC1P1-201ENST00000447199 CCSER1Q9C0I3 900 aa17.32■□□□□ 0.36
SPTLC1P1-201ENST00000447199 TRIP11Q15643 1979 aa17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms