RNA–Protein interactions for RNA: ENST00000444712.5

SNX13-204, Transcript of sorting nexin 13, humanhuman

TSL 5

Gene SNX13, Length 2,018 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-204ENST00000444712 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.84■□□□□ 0.29
SNX13-204ENST00000444712 TAS2R14Q9NYV8 317 aa16.84■□□□□ 0.29
SNX13-204ENST00000444712 ZHX1Q9UKY1 873 aaPredicted RBP16.84■□□□□ 0.29
SNX13-204ENST00000444712 PTPRJQ12913 1337 aa16.83■□□□□ 0.28
SNX13-204ENST00000444712 ABLIM1O14639 778 aa16.83■□□□□ 0.28
SNX13-204ENST00000444712 MTA2O94776 668 aa16.83■□□□□ 0.28
SNX13-204ENST00000444712 MMP3P08254 477 aa16.83■□□□□ 0.28
SNX13-204ENST00000444712 MMEP08473 750 aa16.83■□□□□ 0.28
SNX13-204ENST00000444712 CLTAP09496 248 aa16.83■□□□□ 0.28
SNX13-204ENST00000444712 VSNL1P62760 191 aa16.83■□□□□ 0.28
SNX13-204ENST00000444712 NOP14P78316 857 aaKnown RBP16.83■□□□□ 0.28
SNX13-204ENST00000444712 IGBP1P78318 339 aa16.83■□□□□ 0.28
SNX13-204ENST00000444712 NCOA4Q13772 614 aa16.83■□□□□ 0.28
SNX13-204ENST00000444712 DUOXA2Q1HG44 320 aa16.83■□□□□ 0.28
SNX13-204ENST00000444712 GJC2Q5T442 439 aaPredicted RBP16.83■□□□□ 0.28
SNX13-204ENST00000444712 TAF3Q5VWG9 929 aa16.83■□□□□ 0.28
SNX13-204ENST00000444712 CST9Q5W186 159 aa16.83■□□□□ 0.28
SNX13-204ENST00000444712 TRIM72Q6ZMU5 477 aa16.83■□□□□ 0.28
SNX13-204ENST00000444712 PALB2Q86YC2 1186 aa16.83■□□□□ 0.28
SNX13-204ENST00000444712 RASAL3Q86YV0 1011 aa16.83■□□□□ 0.28
SNX13-204ENST00000444712 ACTRT1Q8TDG2 376 aa16.83■□□□□ 0.28
SNX13-204ENST00000444712 TRIM11Q96F44 468 aa16.83■□□□□ 0.28
SNX13-204ENST00000444712 HES6Q96HZ4 224 aa16.83■□□□□ 0.28
SNX13-204ENST00000444712 FAM53CQ9NYF3 392 aa16.83■□□□□ 0.28
SNX13-204ENST00000444712 CTTNBP2NLQ9P2B4 639 aa16.83■□□□□ 0.28
SNX13-204ENST00000444712 SMPD1P17405 629 aa16.82■□□□□ 0.28
SNX13-204ENST00000444712 WNT7BP56706 349 aa16.82■□□□□ 0.28
SNX13-204ENST00000444712 TNNC1P63316 161 aa16.82■□□□□ 0.28
SNX13-204ENST00000444712 MAP2K5Q13163 448 aa16.82■□□□□ 0.28
SNX13-204ENST00000444712 CHADLQ6NUI6 762 aa16.82■□□□□ 0.28
SNX13-204ENST00000444712 DNAAF5Q86Y56 855 aa16.82■□□□□ 0.28
SNX13-204ENST00000444712 OSGEPQ9NPF4 335 aa16.82■□□□□ 0.28
SNX13-204ENST00000444712 UVRAGQ9P2Y5 699 aa16.82■□□□□ 0.28
SNX13-204ENST00000444712 GTF3C4Q9UKN8 822 aa16.82■□□□□ 0.28
SNX13-204ENST00000444712 PACSIN2Q9UNF0 486 aaPredicted RBP16.82■□□□□ 0.28
SNX13-204ENST00000444712 AKT3Q9Y243 479 aa16.82■□□□□ 0.28
SNX13-204ENST00000444712 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.82■□□□□ 0.28
SNX13-204ENST00000444712 RRN3P2A6NIE6 340 aa16.82■□□□□ 0.28
SNX13-204ENST00000444712 MIF4GDA9UHW6 222 aaKnown RBP16.82■□□□□ 0.28
SNX13-204ENST00000444712 BUB1BO60566 1050 aaPredicted RBP16.82■□□□□ 0.28
SNX13-204ENST00000444712 ZNF286BP0CG31 522 aa16.82■□□□□ 0.28
SNX13-204ENST00000444712 ZNF157P51786 506 aaPredicted RBP16.82■□□□□ 0.28
SNX13-204ENST00000444712 INHBEP58166 350 aa16.82■□□□□ 0.28
SNX13-204ENST00000444712 PPFIA1Q13136 1202 aa16.82■□□□□ 0.28
SNX13-204ENST00000444712 MORN1Q5T089 497 aa16.82■□□□□ 0.28
SNX13-204ENST00000444712 ACAD10Q6JQN1 1059 aa16.82■□□□□ 0.28
SNX13-204ENST00000444712 C8orf74Q6P047 294 aa16.82■□□□□ 0.28
SNX13-204ENST00000444712 MTHFD1LQ6UB35 978 aa16.82■□□□□ 0.28
SNX13-204ENST00000444712 HDXQ7Z353 690 aa16.82■□□□□ 0.28
SNX13-204ENST00000444712 NPLOC4Q8TAT6 608 aa16.82■□□□□ 0.28
SNX13-204ENST00000444712 DDX1Q92499 740 aaKnown RBP16.82■□□□□ 0.28
SNX13-204ENST00000444712 ARHGEF26Q96DR7 871 aa16.82■□□□□ 0.28
SNX13-204ENST00000444712 ANKRD36BP1Q96IX9 119 aa16.82■□□□□ 0.28
SNX13-204ENST00000444712 PCDHB18PQ96TA0 734 aa16.82■□□□□ 0.28
SNX13-204ENST00000444712 TTLL13PA6NNM8 815 aa16.81■□□□□ 0.28
SNX13-204ENST00000444712 PGRMC1O00264 195 aaKnown RBP16.81■□□□□ 0.28
SNX13-204ENST00000444712 B4GALT4O60513 344 aa16.81■□□□□ 0.28
SNX13-204ENST00000444712 SEC31AO94979 1220 aaKnown RBP16.81■□□□□ 0.28
SNX13-204ENST00000444712 ITGBL1O95965 494 aaPredicted RBP16.81■□□□□ 0.28
SNX13-204ENST00000444712 TNNC2P02585 160 aa16.81■□□□□ 0.28
SNX13-204ENST00000444712 HOXC6P09630 235 aa16.81■□□□□ 0.28
SNX13-204ENST00000444712 TMEM191BP0C7N4 346 aa16.81■□□□□ 0.28
SNX13-204ENST00000444712 MYBL1P10243 752 aa16.81■□□□□ 0.28
SNX13-204ENST00000444712 MCF2P10911 925 aa16.81■□□□□ 0.28
SNX13-204ENST00000444712 TNFSF9P41273 254 aa16.81■□□□□ 0.28
SNX13-204ENST00000444712 DNA2P51530 1060 aa16.81■□□□□ 0.28
SNX13-204ENST00000444712 CDC42EP1Q00587 391 aa16.81■□□□□ 0.28
SNX13-204ENST00000444712 TAF1CQ15572 869 aaPredicted RBP16.81■□□□□ 0.28
SNX13-204ENST00000444712 CLEC16AQ2KHT3 1053 aa16.81■□□□□ 0.28
SNX13-204ENST00000444712 BEND6Q5SZJ8 279 aaPredicted RBP16.81■□□□□ 0.28
SNX13-204ENST00000444712 ZNF410Q86VK4 478 aa16.81■□□□□ 0.28
SNX13-204ENST00000444712 USP38Q8NB14 1042 aa16.81■□□□□ 0.28
SNX13-204ENST00000444712 OR5B17Q8NGF7 314 aa16.81■□□□□ 0.28
SNX13-204ENST00000444712 IFT122Q9HBG6 1241 aa16.81■□□□□ 0.28
SNX13-204ENST00000444712 CNTN6Q9UQ52 1028 aa16.81■□□□□ 0.28
SNX13-204ENST00000444712 CLSTN1O94985 981 aa16.8■□□□□ 0.28
SNX13-204ENST00000444712 TBC1D8O95759 1140 aa16.8■□□□□ 0.28
SNX13-204ENST00000444712 ASS1P00966 412 aaKnown RBP16.8■□□□□ 0.28
SNX13-204ENST00000444712 CYP1A2P05177 515 aa16.8■□□□□ 0.28
SNX13-204ENST00000444712 TRPC3Q13507 836 aa16.8■□□□□ 0.28
SNX13-204ENST00000444712 GRIK4Q16099 956 aa16.8■□□□□ 0.28
SNX13-204ENST00000444712 SGSM1Q2NKQ1 1148 aa16.8■□□□□ 0.28
SNX13-204ENST00000444712 RASGEF1CQ8N431 466 aa16.8■□□□□ 0.28
SNX13-204ENST00000444712 FAXDC2Q96IV6 333 aa16.8■□□□□ 0.28
SNX13-204ENST00000444712 NAP1L3Q99457 506 aaPredicted RBP16.8■□□□□ 0.28
SNX13-204ENST00000444712 ARID3AQ99856 593 aa16.8■□□□□ 0.28
SNX13-204ENST00000444712 RPF1Q9H9Y2 349 aaKnown RBP16.8■□□□□ 0.28
SNX13-204ENST00000444712 CPA4Q9UI42 421 aa16.8■□□□□ 0.28
SNX13-204ENST00000444712 PCDHB4Q9Y5E5 795 aa16.8■□□□□ 0.28
SNX13-204ENST00000444712 CCDC188H7C350 402 aa16.8■□□□□ 0.28
SNX13-204ENST00000444712 YWHAEP62258 255 aaKnown RBP16.8■□□□□ 0.28
SNX13-204ENST00000444712 GPS2Q13227 327 aa16.8■□□□□ 0.28
SNX13-204ENST00000444712 SEZ6Q53EL9 994 aa16.8■□□□□ 0.28
SNX13-204ENST00000444712 APBB1IPQ7Z5R6 666 aaPredicted RBP16.8■□□□□ 0.28
SNX13-204ENST00000444712 ZNF653Q96CK0 615 aa16.8■□□□□ 0.28
SNX13-204ENST00000444712 MS4A14Q96JA4 679 aa16.8■□□□□ 0.28
SNX13-204ENST00000444712 RPS6KC1Q96S38 1066 aa16.8■□□□□ 0.28
SNX13-204ENST00000444712 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.8■□□□□ 0.283e-6■■■■■ 30.2
SNX13-204ENST00000444712 CDT1Q9H211 546 aa16.8■□□□□ 0.28
SNX13-204ENST00000444712 CARD9Q9H257 536 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms