RNA–Protein interactions for RNA: ENST00000444191.5

HCFC1-203, Transcript of host cell factor C1, humanhuman

TSL 5

Gene HCFC1, Length 3,624 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1-203ENST00000444191 COL23A1Q86Y22 540 aaPredicted RBP12.37□□□□□ -0.43
HCFC1-203ENST00000444191 TRAF3IP1Q8TDR0 691 aaPredicted RBP12.37□□□□□ -0.43
HCFC1-203ENST00000444191 EPS8L1Q8TE68 723 aa12.37□□□□□ -0.43
HCFC1-203ENST00000444191 PYROXD1Q8WU10 500 aa12.37□□□□□ -0.43
HCFC1-203ENST00000444191 RMDN3Q96TC7 470 aa12.37□□□□□ -0.43
HCFC1-203ENST00000444191 POLR3CQ9BUI4 534 aaPredicted RBP12.37□□□□□ -0.43
HCFC1-203ENST00000444191 OSBPL8Q9BZF1 889 aa12.37□□□□□ -0.43
HCFC1-203ENST00000444191 TUFT1Q9NNX1 390 aa12.37□□□□□ -0.43
HCFC1-203ENST00000444191 WRAP73Q9P2S5 460 aaPredicted RBP12.37□□□□□ -0.43
HCFC1-203ENST00000444191 GABBR1Q9UBS5 961 aa12.37□□□□□ -0.43
HCFC1-203ENST00000444191 ATF5Q9Y2D1 282 aaPredicted RBP12.37□□□□□ -0.43
HCFC1-203ENST00000444191 PKD1L3Q7Z443 1732 aa12.37□□□□□ -0.43
HCFC1-203ENST00000444191 MAGEA4P43358 317 aa12.37□□□□□ -0.43
HCFC1-203ENST00000444191 POLE2P56282 527 aa12.37□□□□□ -0.43
HCFC1-203ENST00000444191 TRPC3Q13507 836 aa12.37□□□□□ -0.43
HCFC1-203ENST00000444191 SPARCL1Q14515 664 aa12.37□□□□□ -0.43
HCFC1-203ENST00000444191 PLCB4Q15147 1175 aa12.37□□□□□ -0.43
HCFC1-203ENST00000444191 KCNT1Q5JUK3 1230 aa12.37□□□□□ -0.43
HCFC1-203ENST00000444191 CDR2LQ86X02 465 aaPredicted RBP12.37□□□□□ -0.43
HCFC1-203ENST00000444191 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.37□□□□□ -0.43
HCFC1-203ENST00000444191 OLFML3Q9NRN5 406 aa12.37□□□□□ -0.43
HCFC1-203ENST00000444191 R3HDM2Q9Y2K5 976 aaKnown RBP12.37□□□□□ -0.43
HCFC1-203ENST00000444191 MYH3P11055 1940 aa12.37□□□□□ -0.43
HCFC1-203ENST00000444191 RPTORQ8N122 1335 aa12.36□□□□□ -0.43
HCFC1-203ENST00000444191 PPP1R12AO14974 1030 aaPredicted RBP12.36□□□□□ -0.43
HCFC1-203ENST00000444191 MAPK13O15264 365 aa12.36□□□□□ -0.43
HCFC1-203ENST00000444191 GABPAQ06546 454 aa12.36□□□□□ -0.43
HCFC1-203ENST00000444191 PPP2R5DQ14738 602 aa12.36□□□□□ -0.43
HCFC1-203ENST00000444191 CDO1Q16878 200 aa12.36□□□□□ -0.43
HCFC1-203ENST00000444191 TSNAXIP1Q2TAA8 658 aa12.36□□□□□ -0.43
HCFC1-203ENST00000444191 SWSAP1Q6NVH7 229 aa12.36□□□□□ -0.43
HCFC1-203ENST00000444191 CCDC62Q6P9F0 684 aa12.36□□□□□ -0.43
HCFC1-203ENST00000444191 ZDHHC24Q6UX98 284 aa12.36□□□□□ -0.43
HCFC1-203ENST00000444191 PDCD7Q8N8D1 485 aaKnown RBP12.36□□□□□ -0.43
HCFC1-203ENST00000444191 ATL2Q8NHH9 583 aa12.36□□□□□ -0.43
HCFC1-203ENST00000444191 CFAP61Q8NHU2 1237 aa12.36□□□□□ -0.43
HCFC1-203ENST00000444191 GLIS2Q9BZE0 524 aaPredicted RBP12.36□□□□□ -0.43
HCFC1-203ENST00000444191 SEL1LQ9UBV2 794 aa12.36□□□□□ -0.43
HCFC1-203ENST00000444191 NEU2Q9Y3R4 380 aa12.36□□□□□ -0.43
HCFC1-203ENST00000444191 CCDC160A6NGH7 325 aa12.36□□□□□ -0.43
HCFC1-203ENST00000444191 TXNDC9O14530 226 aa12.36□□□□□ -0.43
HCFC1-203ENST00000444191 C21orf2O43822 256 aa12.36□□□□□ -0.43
HCFC1-203ENST00000444191 CDH16O75309 829 aa12.36□□□□□ -0.43
HCFC1-203ENST00000444191 CLK2P49760 499 aaKnown RBP12.36□□□□□ -0.43
HCFC1-203ENST00000444191 RASSF2P50749 326 aa12.36□□□□□ -0.43
HCFC1-203ENST00000444191 POLGP54098 1239 aaPredicted RBP12.36□□□□□ -0.43
HCFC1-203ENST00000444191 MARSP56192 900 aaKnown RBP12.36□□□□□ -0.43
HCFC1-203ENST00000444191 TFAMQ00059 246 aaKnown RBP12.36□□□□□ -0.43
HCFC1-203ENST00000444191 ORC1Q13415 861 aa12.36□□□□□ -0.43
HCFC1-203ENST00000444191 CASC4Q6P4E1 433 aa12.36□□□□□ -0.43
HCFC1-203ENST00000444191 DEPTORQ8TB45 409 aa12.36□□□□□ -0.43
HCFC1-203ENST00000444191 PGM2Q96G03 612 aa12.36□□□□□ -0.43
HCFC1-203ENST00000444191 RMDN2Q96LZ7 410 aa12.36□□□□□ -0.43
HCFC1-203ENST00000444191 CFAP57Q96MR6 1250 aa12.36□□□□□ -0.43
HCFC1-203ENST00000444191 MAK16Q9BXY0 300 aaKnown RBP12.36□□□□□ -0.43
HCFC1-203ENST00000444191 TMEM39BQ9GZU3 492 aa12.36□□□□□ -0.43
HCFC1-203ENST00000444191 LRRC4BQ9NT99 713 aa12.36□□□□□ -0.43
HCFC1-203ENST00000444191 ZFP69BQ9UJL9 534 aa12.36□□□□□ -0.43
HCFC1-203ENST00000444191 MAD1L1Q9Y6D9 718 aa12.36□□□□□ -0.43
HCFC1-203ENST00000444191 SLIT2O94813 1529 aa12.36□□□□□ -0.43
HCFC1-203ENST00000444191 CCDC189A1A4V9 331 aa12.36□□□□□ -0.43
HCFC1-203ENST00000444191 EIF3DO15371 548 aaKnown RBP eCLIP12.36□□□□□ -0.43
HCFC1-203ENST00000444191 TTC4O95801 387 aa12.36□□□□□ -0.43
HCFC1-203ENST00000444191 NT5C2P49902 561 aa12.36□□□□□ -0.43
HCFC1-203ENST00000444191 ZRSR2Q15696 482 aaKnown RBP12.36□□□□□ -0.43
HCFC1-203ENST00000444191 RASGEF1CQ8N431 466 aa12.36□□□□□ -0.43
HCFC1-203ENST00000444191 PPFIBP2Q8ND30 876 aa12.36□□□□□ -0.43
HCFC1-203ENST00000444191 MAIP1Q8WWC4 291 aa12.36□□□□□ -0.43
HCFC1-203ENST00000444191 TMEM143Q96AN5 459 aa12.36□□□□□ -0.43
HCFC1-203ENST00000444191 TRAIPQ9BWF2 469 aa12.36□□□□□ -0.43
HCFC1-203ENST00000444191 TXLNGQ9NUQ3 528 aa12.36□□□□□ -0.43
HCFC1-203ENST00000444191 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.36□□□□□ -0.432e-7■■□□□ 12.3
HCFC1-203ENST00000444191 CFAP73A6NFT4 308 aa12.35□□□□□ -0.43
HCFC1-203ENST00000444191 ARHGAP42A6NI28 874 aa12.35□□□□□ -0.43
HCFC1-203ENST00000444191 O00370 1275 aa12.35□□□□□ -0.43
HCFC1-203ENST00000444191 ADRB2P07550 413 aa12.35□□□□□ -0.43
HCFC1-203ENST00000444191 SNHG28P0DPA3 235 aa12.35□□□□□ -0.43
HCFC1-203ENST00000444191 GNA15P30679 374 aa12.35□□□□□ -0.43
HCFC1-203ENST00000444191 MMP13P45452 471 aa12.35□□□□□ -0.43
HCFC1-203ENST00000444191 JAM2P57087 298 aa12.35□□□□□ -0.43
HCFC1-203ENST00000444191 RRP1BQ14684 758 aaKnown RBP12.35□□□□□ -0.43
HCFC1-203ENST00000444191 LRRC36Q1X8D7 754 aa12.35□□□□□ -0.43
HCFC1-203ENST00000444191 RC3H1Q5TC82 1133 aaKnown RBP12.35□□□□□ -0.43
HCFC1-203ENST00000444191 TRMT10CQ7L0Y3 403 aaKnown RBP12.35□□□□□ -0.43
HCFC1-203ENST00000444191 ZC3H18Q86VM9 953 aaKnown RBP12.35□□□□□ -0.43
HCFC1-203ENST00000444191 RHPN2Q8IUC4 686 aa12.35□□□□□ -0.43
HCFC1-203ENST00000444191 SP8Q8IXZ3 490 aa12.35□□□□□ -0.43
HCFC1-203ENST00000444191 CYP4X1Q8N118 509 aa12.35□□□□□ -0.43
HCFC1-203ENST00000444191 CCDC33Q8N5R6 958 aa12.35□□□□□ -0.43
HCFC1-203ENST00000444191 HSPH1Q92598 858 aa12.35□□□□□ -0.43
HCFC1-203ENST00000444191 P3H4Q92791 437 aa12.35□□□□□ -0.43
HCFC1-203ENST00000444191 HSD17B14Q9BPX1 270 aa12.35□□□□□ -0.43
HCFC1-203ENST00000444191 MKNK1Q9BUB5 465 aa12.35□□□□□ -0.43
HCFC1-203ENST00000444191 GRHL1Q9NZI5 618 aa12.35□□□□□ -0.43
HCFC1-203ENST00000444191 LAMB4A4D0S4 1761 aa12.35□□□□□ -0.43
HCFC1-203ENST00000444191 TRPM3Q9HCF6 1732 aaPredicted RBP12.35□□□□□ -0.43
HCFC1-203ENST00000444191 STRCP1A6NGW2 1772 aa12.35□□□□□ -0.43
HCFC1-203ENST00000444191 FAM47DPA6NHR8 397 aa12.35□□□□□ -0.43
HCFC1-203ENST00000444191 ITIH2P19823 946 aa12.35□□□□□ -0.43
HCFC1-203ENST00000444191 DDR1Q08345 913 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms