RNA–Protein interactions for RNA: ENST00000444058.1

ATPAF2-201, Transcript of ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

TSL 3

Gene ATPAF2, Length 685 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2-201ENST00000444058 ATL3Q6DD88 541 aa20.57■□□□□ 0.88
ATPAF2-201ENST00000444058 PDZRN4Q6ZMN7 1036 aaPredicted RBP20.57■□□□□ 0.88
ATPAF2-201ENST00000444058 MAP4K3Q8IVH8 894 aa20.57■□□□□ 0.88
ATPAF2-201ENST00000444058 C12orf76Q8N812 135 aaPredicted RBP20.57■□□□□ 0.88
ATPAF2-201ENST00000444058 HASPINQ8TF76 798 aa20.57■□□□□ 0.88
ATPAF2-201ENST00000444058 DDX12PQ92771 950 aa20.57■□□□□ 0.88
ATPAF2-201ENST00000444058 ZMAT2Q96NC0 199 aaKnown RBP20.57■□□□□ 0.88
ATPAF2-201ENST00000444058 TSPAN18Q96SJ8 248 aa20.57■□□□□ 0.88
ATPAF2-201ENST00000444058 ZHX3Q9H4I2 956 aa20.57■□□□□ 0.88
ATPAF2-201ENST00000444058 C11orf16Q9NQ32 467 aa20.57■□□□□ 0.88
ATPAF2-201ENST00000444058 USTQ9Y2C2 406 aa20.57■□□□□ 0.88
ATPAF2-201ENST00000444058 HARSP12081 509 aaKnown RBP20.56■□□□□ 0.88
ATPAF2-201ENST00000444058 GAP43P17677 238 aa20.56■□□□□ 0.88
ATPAF2-201ENST00000444058 FGFR3P22607 806 aa20.56■□□□□ 0.88
ATPAF2-201ENST00000444058 STAT6P42226 847 aa20.56■□□□□ 0.88
ATPAF2-201ENST00000444058 LILRA6Q6PI73 481 aa20.56■□□□□ 0.88
ATPAF2-201ENST00000444058 LNX1Q8TBB1 728 aaPredicted RBP20.56■□□□□ 0.88
ATPAF2-201ENST00000444058 HVCN1Q96D96 273 aa20.56■□□□□ 0.88
ATPAF2-201ENST00000444058 LRFN3Q9BTN0 628 aa20.56■□□□□ 0.88
ATPAF2-201ENST00000444058 POMKQ9H5K3 350 aa20.56■□□□□ 0.88
ATPAF2-201ENST00000444058 MAN1C1Q9NR34 630 aa20.56■□□□□ 0.88
ATPAF2-201ENST00000444058 MYMKA6NI61 221 aa20.55■□□□□ 0.88
ATPAF2-201ENST00000444058 SPDYE4A6NLX3 237 aa20.55■□□□□ 0.88
ATPAF2-201ENST00000444058 PRR33A8MZF0 331 aa20.55■□□□□ 0.88
ATPAF2-201ENST00000444058 MEFVO15553 781 aaPredicted RBP20.55■□□□□ 0.88
ATPAF2-201ENST00000444058 F13A1P00488 732 aa20.55■□□□□ 0.88
ATPAF2-201ENST00000444058 SOX4Q06945 474 aaPredicted RBP20.55■□□□□ 0.88
ATPAF2-201ENST00000444058 CD300LGQ6UXG3 332 aa20.55■□□□□ 0.88
ATPAF2-201ENST00000444058 TMC5Q6UXY8 1006 aa20.55■□□□□ 0.88
ATPAF2-201ENST00000444058 ZNF720Q7Z2F6 126 aa20.55■□□□□ 0.88
ATPAF2-201ENST00000444058 DNAJC19Q96DA6 116 aa20.55■□□□□ 0.88
ATPAF2-201ENST00000444058 HAPLN2Q9GZV7 340 aa20.55■□□□□ 0.88
ATPAF2-201ENST00000444058 TFIP11Q9UBB9 837 aaKnown RBP20.55■□□□□ 0.88
ATPAF2-201ENST00000444058 MUTYHQ9UIF7 546 aa20.55■□□□□ 0.88
ATPAF2-201ENST00000444058 A0A0B4J269 797 aa20.54■□□□□ 0.88
ATPAF2-201ENST00000444058 TTC26A0AVF1 554 aa20.54■□□□□ 0.88
ATPAF2-201ENST00000444058 TGM5O43548 720 aa20.54■□□□□ 0.88
ATPAF2-201ENST00000444058 FAM189A1O60320 539 aa20.54■□□□□ 0.88
ATPAF2-201ENST00000444058 ADRB2P07550 413 aa20.54■□□□□ 0.88
ATPAF2-201ENST00000444058 NMT1P30419 496 aaKnown RBP20.54■□□□□ 0.88
ATPAF2-201ENST00000444058 MATR3P43243 847 aaKnown RBP eCLIP20.54■□□□□ 0.88
ATPAF2-201ENST00000444058 PSMD5Q16401 504 aa20.54■□□□□ 0.88
ATPAF2-201ENST00000444058 PRSS55Q6UWB4 352 aaPredicted RBP20.54■□□□□ 0.88
ATPAF2-201ENST00000444058 DYMQ7RTS9 669 aa20.54■□□□□ 0.88
ATPAF2-201ENST00000444058 CEP57Q86XR8 500 aa20.54■□□□□ 0.88
ATPAF2-201ENST00000444058 CLSTN3Q9BQT9 956 aa20.54■□□□□ 0.88
ATPAF2-201ENST00000444058 CUEDC2Q9H467 287 aa20.54■□□□□ 0.88
ATPAF2-201ENST00000444058 GOLGA2P5Q9HBQ8 144 aa20.54■□□□□ 0.88
ATPAF2-201ENST00000444058 OLFML3Q9NRN5 406 aa20.54■□□□□ 0.88
ATPAF2-201ENST00000444058 CDH22Q9UJ99 828 aa20.54■□□□□ 0.88
ATPAF2-201ENST00000444058 A0A087X0B3 334 aa20.53■□□□□ 0.88
ATPAF2-201ENST00000444058 PODXLO00592 558 aa20.53■□□□□ 0.88
ATPAF2-201ENST00000444058 OGTO15294 1046 aa20.53■□□□□ 0.88
ATPAF2-201ENST00000444058 CUTAO60888 179 aa20.53■□□□□ 0.88
ATPAF2-201ENST00000444058 PPP1R37O75864 691 aa20.53■□□□□ 0.88
ATPAF2-201ENST00000444058 CYP3A5P20815 502 aa20.53■□□□□ 0.88
ATPAF2-201ENST00000444058 POU5F1Q01860 360 aaKnown RBP20.53■□□□□ 0.88
ATPAF2-201ENST00000444058 SEZ6Q53EL9 994 aa20.53■□□□□ 0.88
ATPAF2-201ENST00000444058 SLFN12LQ6IEE8 588 aa20.53■□□□□ 0.88
ATPAF2-201ENST00000444058 KANK3Q6NY19 840 aa20.53■□□□□ 0.88
ATPAF2-201ENST00000444058 SFR1Q86XK3 245 aa20.53■□□□□ 0.88
ATPAF2-201ENST00000444058 PALB2Q86YC2 1186 aa20.53■□□□□ 0.88
ATPAF2-201ENST00000444058 CD302Q8IX05 232 aa20.53■□□□□ 0.88
ATPAF2-201ENST00000444058 PLCD3Q8N3E9 789 aa20.53■□□□□ 0.88
ATPAF2-201ENST00000444058 C3orf58Q8NDZ4 430 aa20.53■□□□□ 0.88
ATPAF2-201ENST00000444058 KCNG4Q8TDN1 519 aa20.53■□□□□ 0.88
ATPAF2-201ENST00000444058 EDAQ92838 391 aa20.53■□□□□ 0.88
ATPAF2-201ENST00000444058 STRA6Q9BX79 667 aa20.53■□□□□ 0.88
ATPAF2-201ENST00000444058 LRRC27Q9C0I9 530 aa20.53■□□□□ 0.88
ATPAF2-201ENST00000444058 ZDHHC7Q9NXF8 308 aa20.53■□□□□ 0.88
ATPAF2-201ENST00000444058 BACE2Q9Y5Z0 518 aa20.53■□□□□ 0.88
ATPAF2-201ENST00000444058 STYXL1Q9Y6J8 313 aa20.53■□□□□ 0.88
ATPAF2-201ENST00000444058 FRMD3A2A2Y4 597 aa20.52■□□□□ 0.88
ATPAF2-201ENST00000444058 SYN3O14994 580 aa20.52■□□□□ 0.88
ATPAF2-201ENST00000444058 WEE2P0C1S8 567 aa20.52■□□□□ 0.88
ATPAF2-201ENST00000444058 CXCL8P10145 99 aa20.52■□□□□ 0.88
ATPAF2-201ENST00000444058 RPL17P18621 184 aaKnown RBP20.52■□□□□ 0.88
ATPAF2-201ENST00000444058 PPP2R3AQ06190 1150 aa20.52■□□□□ 0.88
ATPAF2-201ENST00000444058 RAB33AQ14088 237 aa20.52■□□□□ 0.88
ATPAF2-201ENST00000444058 ZBTB6Q15916 424 aa20.52■□□□□ 0.88
ATPAF2-201ENST00000444058 ZC2HC1CQ53FD0 456 aaPredicted RBP20.52■□□□□ 0.88
ATPAF2-201ENST00000444058 SLC39A4Q6P5W5 647 aa20.52■□□□□ 0.88
ATPAF2-201ENST00000444058 ANKS3Q6ZW76 656 aa20.52■□□□□ 0.88
ATPAF2-201ENST00000444058 ZDHHC14Q8IZN3 488 aa20.52■□□□□ 0.88
ATPAF2-201ENST00000444058 MSTO1Q9BUK6 570 aa20.52■□□□□ 0.88
ATPAF2-201ENST00000444058 PANK2Q9BZ23 570 aa20.52■□□□□ 0.88
ATPAF2-201ENST00000444058 TNMDQ9H2S6 317 aa20.52■□□□□ 0.88
ATPAF2-201ENST00000444058 MRPL44Q9H9J2 332 aaKnown RBP20.52■□□□□ 0.88
ATPAF2-201ENST00000444058 MTRRQ9UBK8 725 aa20.52■□□□□ 0.88
ATPAF2-201ENST00000444058 CFAP45Q9UL16 551 aa20.52■□□□□ 0.88
ATPAF2-201ENST00000444058 CITO14578 2027 aa20.52■□□□□ 0.88
ATPAF2-201ENST00000444058 TRIP11Q15643 1979 aa20.52■□□□□ 0.87
ATPAF2-201ENST00000444058 CCDC195A0A1B0GUA6 201 aa20.51■□□□□ 0.87
ATPAF2-201ENST00000444058 COL9A1P20849 921 aa20.51■□□□□ 0.87
ATPAF2-201ENST00000444058 IGFBP6P24592 240 aaPredicted RBP20.51■□□□□ 0.87
ATPAF2-201ENST00000444058 ALCAMQ13740 583 aa20.51■□□□□ 0.87
ATPAF2-201ENST00000444058 E2F4Q16254 413 aa20.51■□□□□ 0.87
ATPAF2-201ENST00000444058 CCDC149Q6ZUS6 474 aa20.51■□□□□ 0.87
ATPAF2-201ENST00000444058 RTL10Q7L3V2 364 aa20.51■□□□□ 0.87
ATPAF2-201ENST00000444058 PDILTQ8N807 584 aa20.51■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms