RNA–Protein interactions for RNA: ENST00000441703.5

HDAC6-210, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 599 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-210ENST00000441703 LIN9Q5TKA1 542 aa7.11□□□□□ -1.27
HDAC6-210ENST00000441703 FAM160B1Q5W0V3 765 aa7.11□□□□□ -1.27
HDAC6-210ENST00000441703 LARP1BQ659C4 914 aaKnown RBP7.11□□□□□ -1.27
HDAC6-210ENST00000441703 TCEAL6Q6IPX3 200 aa7.11□□□□□ -1.27
HDAC6-210ENST00000441703 MMS22LQ6ZRQ5 1243 aa7.11□□□□□ -1.27
HDAC6-210ENST00000441703 RSRC2Q7L4I2 434 aaKnown RBP7.11□□□□□ -1.27
HDAC6-210ENST00000441703 PACS2Q86VP3 889 aa7.11□□□□□ -1.27
HDAC6-210ENST00000441703 GLYCTKQ8IVS8 523 aa7.11□□□□□ -1.27
HDAC6-210ENST00000441703 DEFB124Q8NES8 71 aa7.11□□□□□ -1.27
HDAC6-210ENST00000441703 LEO1Q8WVC0 666 aaPredicted RBP7.11□□□□□ -1.27
HDAC6-210ENST00000441703 RABGGTAQ92696 567 aa7.11□□□□□ -1.27
HDAC6-210ENST00000441703 LPPQ93052 612 aa7.11□□□□□ -1.27
HDAC6-210ENST00000441703 TCEAL3Q969E4 200 aa7.11□□□□□ -1.27
HDAC6-210ENST00000441703 BPIFA3Q9BQP9 254 aa7.11□□□□□ -1.27
HDAC6-210ENST00000441703 SDF4Q9BRK5 362 aa7.11□□□□□ -1.27
HDAC6-210ENST00000441703 TMEM175Q9BSA9 504 aa7.11□□□□□ -1.27
HDAC6-210ENST00000441703 FUT8Q9BYC5 575 aa7.11□□□□□ -1.27
HDAC6-210ENST00000441703 KRT23Q9C075 422 aa7.11□□□□□ -1.27
HDAC6-210ENST00000441703 DNAJC25Q9H1X3 360 aa7.11□□□□□ -1.27
HDAC6-210ENST00000441703 ZSCAN16Q9H4T2 348 aaPredicted RBP7.11□□□□□ -1.27
HDAC6-210ENST00000441703 ZSWIM6Q9HCJ5 1215 aa7.11□□□□□ -1.27
HDAC6-210ENST00000441703 TMEM9BQ9NQ34 198 aa7.11□□□□□ -1.27
HDAC6-210ENST00000441703 PDRG1Q9NUG6 133 aa7.11□□□□□ -1.27
HDAC6-210ENST00000441703 ZSWIM5Q9P217 1185 aa7.11□□□□□ -1.27
HDAC6-210ENST00000441703 UBIAD1Q9Y5Z9 338 aa7.11□□□□□ -1.27
HDAC6-210ENST00000441703 DOCK6Q96HP0 2047 aa7.11□□□□□ -1.27
HDAC6-210ENST00000441703 NFASCO94856 1347 aa7.1□□□□□ -1.27
HDAC6-210ENST00000441703 CCDC151A5D8V7 595 aa7.1□□□□□ -1.27
HDAC6-210ENST00000441703 GOLGA6L9A6NEM1 432 aa7.1□□□□□ -1.27
HDAC6-210ENST00000441703 EIF3CLB5ME19 914 aaKnown RBP7.1□□□□□ -1.27
HDAC6-210ENST00000441703 H0Y626 953 aa7.1□□□□□ -1.27
HDAC6-210ENST00000441703 K7ESF4 209 aa7.1□□□□□ -1.27
HDAC6-210ENST00000441703 MEIS2O14770 477 aa7.1□□□□□ -1.27
HDAC6-210ENST00000441703 TGM5O43548 720 aa7.1□□□□□ -1.27
HDAC6-210ENST00000441703 CYTH3O43739 400 aa7.1□□□□□ -1.27
HDAC6-210ENST00000441703 SASH3O75995 380 aa7.1□□□□□ -1.27
HDAC6-210ENST00000441703 PAPSS2O95340 614 aaPredicted RBP7.1□□□□□ -1.27
HDAC6-210ENST00000441703 TRIM16O95361 564 aa7.1□□□□□ -1.27
HDAC6-210ENST00000441703 PAPLNO95428 1278 aa7.1□□□□□ -1.27
HDAC6-210ENST00000441703 C1RP00736 705 aa7.1□□□□□ -1.27
HDAC6-210ENST00000441703 PRB1P04280 392 aa7.1□□□□□ -1.27
HDAC6-210ENST00000441703 TUBBP07437 444 aa7.1□□□□□ -1.27
HDAC6-210ENST00000441703 EIF4BP23588 611 aaKnown RBP7.1□□□□□ -1.27
HDAC6-210ENST00000441703 TMOD1P28289 359 aa7.1□□□□□ -1.27
HDAC6-210ENST00000441703 RAP1GAPP47736 663 aa7.1□□□□□ -1.27
HDAC6-210ENST00000441703 GYS2P54840 703 aa7.1□□□□□ -1.27
HDAC6-210ENST00000441703 NLRP11P59045 1033 aaKnown RBP7.1□□□□□ -1.27
HDAC6-210ENST00000441703 ACTR2P61160 394 aa7.1□□□□□ -1.27
HDAC6-210ENST00000441703 SCAPQ12770 1279 aa7.1□□□□□ -1.27
HDAC6-210ENST00000441703 TRDNQ13061 729 aa7.1□□□□□ -1.27
HDAC6-210ENST00000441703 TUBB2AQ13885 445 aa7.1□□□□□ -1.27
HDAC6-210ENST00000441703 ARID5BQ14865 1188 aa7.1□□□□□ -1.27
HDAC6-210ENST00000441703 ZRSR1Q15695 479 aaKnown RBP7.1□□□□□ -1.27
HDAC6-210ENST00000441703 CAMK4Q16566 473 aa7.1□□□□□ -1.27
HDAC6-210ENST00000441703 UAP1L1Q3KQV9 507 aa7.1□□□□□ -1.27
HDAC6-210ENST00000441703 PPM1LQ5SGD2 360 aa7.1□□□□□ -1.27
HDAC6-210ENST00000441703 ATL3Q6DD88 541 aa7.1□□□□□ -1.27
HDAC6-210ENST00000441703 TWF2Q6IBS0 349 aaKnown RBP7.1□□□□□ -1.27
HDAC6-210ENST00000441703 TRIM65Q6PJ69 517 aa7.1□□□□□ -1.27
HDAC6-210ENST00000441703 USP17L6PQ6QN14 398 aa7.1□□□□□ -1.27
HDAC6-210ENST00000441703 KBTBD6Q86V97 674 aa7.1□□□□□ -1.27
HDAC6-210ENST00000441703 EFCAB13Q8IY85 973 aa7.1□□□□□ -1.27
HDAC6-210ENST00000441703 CKAP2LQ8IYA6 745 aa7.1□□□□□ -1.27
HDAC6-210ENST00000441703 ITFG1Q8TB96 612 aa7.1□□□□□ -1.27
HDAC6-210ENST00000441703 GAB3Q8WWW8 586 aa7.1□□□□□ -1.27
HDAC6-210ENST00000441703 PGBD4Q96DM1 585 aa7.1□□□□□ -1.27
HDAC6-210ENST00000441703 SPATA32Q96LK8 384 aa7.1□□□□□ -1.27
HDAC6-210ENST00000441703 UBL7Q96S82 380 aaPredicted RBP7.1□□□□□ -1.27
HDAC6-210ENST00000441703 EIF3CQ99613 913 aaKnown RBP7.1□□□□□ -1.27
HDAC6-210ENST00000441703 TUBB2BQ9BVA1 445 aa7.1□□□□□ -1.27
HDAC6-210ENST00000441703 NAT10Q9H0A0 1025 aaKnown RBP7.1□□□□□ -1.27
HDAC6-210ENST00000441703 CXorf56Q9H5V9 222 aa7.1□□□□□ -1.27
HDAC6-210ENST00000441703 CCDC86Q9H6F5 360 aaKnown RBP7.1□□□□□ -1.27
HDAC6-210ENST00000441703 CNNM2Q9H8M5 875 aa7.1□□□□□ -1.27
HDAC6-210ENST00000441703 RXFP1Q9HBX9 757 aa7.1□□□□□ -1.27
HDAC6-210ENST00000441703 JADE2Q9NQC1 790 aa7.1□□□□□ -1.27
HDAC6-210ENST00000441703 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP7.1□□□□□ -1.27
HDAC6-210ENST00000441703 PRG3Q9Y2Y8 225 aaPredicted RBP7.1□□□□□ -1.27
HDAC6-210ENST00000441703 RAI2Q9Y5P3 530 aa7.1□□□□□ -1.27
HDAC6-210ENST00000441703 PIAS3Q9Y6X2 628 aa7.1□□□□□ -1.27
HDAC6-210ENST00000441703 SPAG17Q6Q759 2223 aa7.09□□□□□ -1.27
HDAC6-210ENST00000441703 SDK1Q7Z5N4 2213 aa7.09□□□□□ -1.27
HDAC6-210ENST00000441703 BPTFQ12830 3046 aa7.09□□□□□ -1.27
HDAC6-210ENST00000441703 HELZ2Q9BYK8 2649 aaKnown RBP7.09□□□□□ -1.27
HDAC6-210ENST00000441703 SHISA7A6NL88 538 aa7.09□□□□□ -1.27
HDAC6-210ENST00000441703 BECN2A8MW95 431 aa7.09□□□□□ -1.27
HDAC6-210ENST00000441703 J3QKU1 62 aa7.09□□□□□ -1.27
HDAC6-210ENST00000441703 NRP1O14786 923 aa7.09□□□□□ -1.27
HDAC6-210ENST00000441703 CCL16O15467 120 aa7.09□□□□□ -1.27
HDAC6-210ENST00000441703 ARHGAP6O43182 974 aa7.09□□□□□ -1.27
HDAC6-210ENST00000441703 MAP3K13O43283 966 aa7.09□□□□□ -1.27
HDAC6-210ENST00000441703 NR1I2O75469 434 aa7.09□□□□□ -1.27
HDAC6-210ENST00000441703 HNRNPA1P09651 372 aaKnown RBP eCLIP7.09□□□□□ -1.27
HDAC6-210ENST00000441703 CHRNB1P11230 501 aa7.09□□□□□ -1.27
HDAC6-210ENST00000441703 FGFR4P22455 802 aa7.09□□□□□ -1.27
HDAC6-210ENST00000441703 USP8P40818 1118 aa7.09□□□□□ -1.27
HDAC6-210ENST00000441703 PHKA2P46019 1235 aa7.09□□□□□ -1.27
HDAC6-210ENST00000441703 OR1G1P47890 313 aa7.09□□□□□ -1.27
HDAC6-210ENST00000441703 LMAN1P49257 510 aa7.09□□□□□ -1.27
HDAC6-210ENST00000441703 CLCN3P51790 818 aa7.09□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms