RNA–Protein interactions for RNA: ENST00000441443.6

SHOX2-203, Transcript of short stature homeobox 2, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHOX2, Length 3,038 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-203ENST00000441443 KHDC1Q4VXA5 237 aaKnown RBP21.61■■□□□ 1.05
SHOX2-203ENST00000441443 CYP4F22Q6NT55 531 aa21.61■■□□□ 1.05
SHOX2-203ENST00000441443 GALNT15Q8N3T1 639 aa21.61■■□□□ 1.05
SHOX2-203ENST00000441443 ETNPPLQ8TBG4 499 aa21.61■■□□□ 1.05
SHOX2-203ENST00000441443 INPP5DQ92835 1189 aa21.61■■□□□ 1.05
SHOX2-203ENST00000441443 ANAPC5Q9UJX4 755 aa21.61■■□□□ 1.05
SHOX2-203ENST00000441443 EYA4O95677 639 aa21.61■■□□□ 1.05
SHOX2-203ENST00000441443 NPR1P16066 1061 aa21.61■■□□□ 1.05
SHOX2-203ENST00000441443 LBRQ14739 615 aaKnown RBP21.61■■□□□ 1.05
SHOX2-203ENST00000441443 USH1GQ495M9 461 aa21.61■■□□□ 1.05
SHOX2-203ENST00000441443 ZNF564Q8TBZ8 553 aaPredicted RBP21.61■■□□□ 1.05
SHOX2-203ENST00000441443 KAT5Q92993 513 aa21.61■■□□□ 1.05
SHOX2-203ENST00000441443 P2RX7Q99572 595 aaKnown RBP21.61■■□□□ 1.05
SHOX2-203ENST00000441443 FRMD4BQ9Y2L6 1034 aa21.61■■□□□ 1.05
SHOX2-203ENST00000441443 STARD13Q9Y3M8 1113 aa21.61■■□□□ 1.05
SHOX2-203ENST00000441443 RABGAP1Q9Y3P9 1069 aa21.61■■□□□ 1.05
SHOX2-203ENST00000441443 DDTLA6NHG4 134 aaPredicted RBP21.6■■□□□ 1.05
SHOX2-203ENST00000441443 IRF6O14896 467 aa21.6■■□□□ 1.05
SHOX2-203ENST00000441443 RTN3O95197 1032 aaPredicted RBP21.6■■□□□ 1.05
SHOX2-203ENST00000441443 MOGSQ13724 837 aa21.6■■□□□ 1.05
SHOX2-203ENST00000441443 TAF1BQ53T94 588 aaPredicted RBP21.6■■□□□ 1.05
SHOX2-203ENST00000441443 NLGN1Q8N2Q7 840 aa21.6■■□□□ 1.05
SHOX2-203ENST00000441443 RBBP8NLQ8NC74 664 aaPredicted RBP21.6■■□□□ 1.05
SHOX2-203ENST00000441443 METTL5Q9NRN9 209 aaKnown RBP21.6■■□□□ 1.05
SHOX2-203ENST00000441443 LY75O60449 1722 aa21.6■■□□□ 1.05
SHOX2-203ENST00000441443 A0A1B0GVG6 124 aa21.6■■□□□ 1.05
SHOX2-203ENST00000441443 SGPL1O95470 568 aa21.6■■□□□ 1.05
SHOX2-203ENST00000441443 ALDH3A1P30838 453 aa21.6■■□□□ 1.05
SHOX2-203ENST00000441443 DLG4P78352 724 aa21.6■■□□□ 1.05
SHOX2-203ENST00000441443 RINT1Q6NUQ1 792 aa21.6■■□□□ 1.05
SHOX2-203ENST00000441443 GRID1Q9ULK0 1009 aa21.6■■□□□ 1.05
SHOX2-203ENST00000441443 PCDHA1Q9Y5I3 950 aa21.6■■□□□ 1.05
SHOX2-203ENST00000441443 GSTTP1A0A1W2PQM5 241 aa21.59■■□□□ 1.05
SHOX2-203ENST00000441443 NVLO15381 856 aaKnown RBP21.59■■□□□ 1.05
SHOX2-203ENST00000441443 EEF2P13639 858 aaKnown RBP21.59■■□□□ 1.05
SHOX2-203ENST00000441443 CNGA1P29973 690 aa21.59■■□□□ 1.05
SHOX2-203ENST00000441443 ARHGAP4P98171 946 aa21.59■■□□□ 1.05
SHOX2-203ENST00000441443 TRAF1Q13077 416 aa21.59■■□□□ 1.05
SHOX2-203ENST00000441443 CCDC6Q16204 474 aa21.59■■□□□ 1.05
SHOX2-203ENST00000441443 SGSM1Q2NKQ1 1148 aa21.59■■□□□ 1.05
SHOX2-203ENST00000441443 NBPF20Q3BBV1 942 aa21.59■■□□□ 1.05
SHOX2-203ENST00000441443 ANKRD35Q8N283 1001 aa21.59■■□□□ 1.05
SHOX2-203ENST00000441443 C12orf50Q8NA57 414 aaPredicted RBP21.59■■□□□ 1.05
SHOX2-203ENST00000441443 MRRFQ96E11 262 aaKnown RBP21.59■■□□□ 1.05
SHOX2-203ENST00000441443 ASMTLO95671 621 aa21.59■■□□□ 1.05
SHOX2-203ENST00000441443 FAM43BQ6ZT52 329 aaPredicted RBP21.59■■□□□ 1.05
SHOX2-203ENST00000441443 LRRC8CQ8TDW0 803 aa21.59■■□□□ 1.05
SHOX2-203ENST00000441443 WDR35Q9P2L0 1181 aa21.59■■□□□ 1.05
SHOX2-203ENST00000441443 LGALS13Q9UHV8 139 aa21.59■■□□□ 1.05
SHOX2-203ENST00000441443 BCRP11274 1271 aa21.58■■□□□ 1.05
SHOX2-203ENST00000441443 ATF2P15336 505 aa21.58■■□□□ 1.05
SHOX2-203ENST00000441443 RCN2Q14257 317 aa21.58■■□□□ 1.05
SHOX2-203ENST00000441443 GRIPAP1Q4V328 841 aa21.58■■□□□ 1.05
SHOX2-203ENST00000441443 WASHC2DQ5SRD0 308 aa21.58■■□□□ 1.05
SHOX2-203ENST00000441443 ZNF333Q96JL9 665 aa21.58■■□□□ 1.05
SHOX2-203ENST00000441443 NAP1L4Q99733 375 aaKnown RBP21.58■■□□□ 1.05
SHOX2-203ENST00000441443 HERPUD2Q9BSE4 406 aa21.58■■□□□ 1.05
SHOX2-203ENST00000441443 USP20Q9Y2K6 914 aa21.58■■□□□ 1.05
SHOX2-203ENST00000441443 DCTN3O75935 186 aa21.58■■□□□ 1.05
SHOX2-203ENST00000441443 CHRNA5P30532 468 aa21.58■■□□□ 1.05
SHOX2-203ENST00000441443 HP1BP3Q5SSJ5 553 aaPredicted RBP21.58■■□□□ 1.05
SHOX2-203ENST00000441443 C4orf33Q8N1A6 199 aa21.58■■□□□ 1.05
SHOX2-203ENST00000441443 LMO3Q8TAP4 145 aa21.58■■□□□ 1.05
SHOX2-203ENST00000441443 CYP2W1Q8TAV3 490 aa21.58■■□□□ 1.05
SHOX2-203ENST00000441443 FAM136AQ96C01 138 aa21.58■■□□□ 1.05
SHOX2-203ENST00000441443 CDK5RAP2Q96SN8 1893 aa21.58■■□□□ 1.04
SHOX2-203ENST00000441443 FAM86B1E9PN63 330 aa21.58■■□□□ 1.04
SHOX2-203ENST00000441443 EML1O00423 815 aa21.58■■□□□ 1.04
SHOX2-203ENST00000441443 ABLIM1O14639 778 aa21.58■■□□□ 1.04
SHOX2-203ENST00000441443 EXOC3O60645 756 aa21.58■■□□□ 1.04
SHOX2-203ENST00000441443 FAM86B2P0C5J1 330 aa21.58■■□□□ 1.04
SHOX2-203ENST00000441443 ALDH1B1P30837 517 aa21.58■■□□□ 1.04
SHOX2-203ENST00000441443 GCLCP48506 637 aaPredicted RBP21.58■■□□□ 1.04
SHOX2-203ENST00000441443 CERKLQ49MI3 558 aaPredicted RBP21.58■■□□□ 1.04
SHOX2-203ENST00000441443 HS2ST1Q7LGA3 356 aa21.58■■□□□ 1.04
SHOX2-203ENST00000441443 DCLRE1BQ9H816 532 aa21.58■■□□□ 1.04
SHOX2-203ENST00000441443 OLFML3Q9NRN5 406 aa21.58■■□□□ 1.04
SHOX2-203ENST00000441443 AGPAT3Q9NRZ7 376 aa21.58■■□□□ 1.04
SHOX2-203ENST00000441443 QRICH1Q2TAL8 776 aa21.57■■□□□ 1.04
SHOX2-203ENST00000441443 ARMC3Q5W041 872 aa21.57■■□□□ 1.04
SHOX2-203ENST00000441443 OR52E8Q6IFG1 317 aa21.57■■□□□ 1.04
SHOX2-203ENST00000441443 DSTYKQ6XUX3 929 aa21.57■■□□□ 1.04
SHOX2-203ENST00000441443 ZNF653Q96CK0 615 aa21.57■■□□□ 1.04
SHOX2-203ENST00000441443 NUMBLQ9Y6R0 609 aa21.57■■□□□ 1.04
SHOX2-203ENST00000441443 TCEA3O75764 348 aa21.57■■□□□ 1.04
SHOX2-203ENST00000441443 RRM1P23921 792 aa21.57■■□□□ 1.04
SHOX2-203ENST00000441443 NOP9Q86U38 636 aaKnown RBP21.57■■□□□ 1.04
SHOX2-203ENST00000441443 MIPEPQ99797 713 aa21.57■■□□□ 1.04
SHOX2-203ENST00000441443 TRIM4Q9C037 500 aa21.57■■□□□ 1.04
SHOX2-203ENST00000441443 VCXQ9H320 206 aa21.57■■□□□ 1.04
SHOX2-203ENST00000441443 UBR3Q6ZT12 1888 aa21.56■■□□□ 1.04
SHOX2-203ENST00000441443 CYP3A7-CYP3A51PA0A087WV96 503 aa21.56■■□□□ 1.04
SHOX2-203ENST00000441443 POC1B-GALNT4F8VUJ3 575 aa21.56■■□□□ 1.04
SHOX2-203ENST00000441443 CYP3A7P24462 503 aa21.56■■□□□ 1.04
SHOX2-203ENST00000441443 MARK3P27448 753 aa21.56■■□□□ 1.04
SHOX2-203ENST00000441443 RASSF2P50749 326 aa21.56■■□□□ 1.04
SHOX2-203ENST00000441443 BFSP1Q12934 665 aa21.56■■□□□ 1.04
SHOX2-203ENST00000441443 SNX30Q5VWJ9 437 aa21.56■■□□□ 1.04
SHOX2-203ENST00000441443 FOXB2Q5VYV0 432 aa21.56■■□□□ 1.04
SHOX2-203ENST00000441443 CAPN12Q6ZSI9 719 aa21.56■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms