RNA–Protein interactions for RNA: ENST00000439986.8

CCBE1-202, Transcript of collagen and calcium binding EGF domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCBE1, Length 6,227 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCBE1-202ENST00000439986 MXI1P50539 228 aa12.23□□□□□ -0.45
CCBE1-202ENST00000439986 OCRLQ01968 901 aa12.23□□□□□ -0.45
CCBE1-202ENST00000439986 COBLL1Q53SF7 1204 aa12.23□□□□□ -0.45
CCBE1-202ENST00000439986 SLC27A3Q5K4L6 730 aa12.23□□□□□ -0.45
CCBE1-202ENST00000439986 FAM196AQ6ZSG2 479 aa12.23□□□□□ -0.45
CCBE1-202ENST00000439986 CDHR1Q96JP9 859 aa12.23□□□□□ -0.45
CCBE1-202ENST00000439986 MSTO1Q9BUK6 570 aa12.23□□□□□ -0.45
CCBE1-202ENST00000439986 PRKAB1Q9Y478 270 aa12.23□□□□□ -0.45
CCBE1-202ENST00000439986 SSU72P8A0A1W2PR75 194 aa12.22□□□□□ -0.45
CCBE1-202ENST00000439986 CCNA1P78396 465 aa12.22□□□□□ -0.45
CCBE1-202ENST00000439986 DNAJC3Q13217 504 aa12.22□□□□□ -0.45
CCBE1-202ENST00000439986 DCAF4L1Q3SXM0 396 aa12.22□□□□□ -0.45
CCBE1-202ENST00000439986 SNX19Q92543 992 aa12.22□□□□□ -0.45
CCBE1-202ENST00000439986 TP53INP1Q96A56 240 aa12.22□□□□□ -0.45
CCBE1-202ENST00000439986 CCDC17Q96LX7 622 aa12.22□□□□□ -0.45
CCBE1-202ENST00000439986 CEP170BQ9Y4F5 1589 aaPredicted RBP12.22□□□□□ -0.45
CCBE1-202ENST00000439986 ELF1P32519 619 aa12.22□□□□□ -0.45
CCBE1-202ENST00000439986 TOB1P50616 345 aaPredicted RBP12.22□□□□□ -0.45
CCBE1-202ENST00000439986 ARHGDIAP52565 204 aa12.22□□□□□ -0.45
CCBE1-202ENST00000439986 NFX1Q12986 1120 aaKnown RBP12.22□□□□□ -0.45
CCBE1-202ENST00000439986 PPP6R3Q5H9R7 873 aaPredicted RBP12.22□□□□□ -0.45
CCBE1-202ENST00000439986 OR2W6PQ8NHA6 318 aa12.22□□□□□ -0.45
CCBE1-202ENST00000439986 TRPV6Q9H1D0 765 aa12.22□□□□□ -0.45
CCBE1-202ENST00000439986 ABCA9Q8IUA7 1624 aa12.22□□□□□ -0.45
CCBE1-202ENST00000439986 ORC4O43929 436 aa12.22□□□□□ -0.45
CCBE1-202ENST00000439986 TDP2O95551 362 aa12.22□□□□□ -0.45
CCBE1-202ENST00000439986 SERPINB2P05120 415 aa12.22□□□□□ -0.45
CCBE1-202ENST00000439986 MCF2P10911 925 aa12.22□□□□□ -0.45
CCBE1-202ENST00000439986 DRP2Q13474 957 aa12.22□□□□□ -0.45
CCBE1-202ENST00000439986 OASLQ15646 514 aaKnown RBP12.22□□□□□ -0.45
CCBE1-202ENST00000439986 SLC18A3Q16572 532 aa12.22□□□□□ -0.45
CCBE1-202ENST00000439986 QKIQ96PU8 341 aaKnown RBP eCLIP12.22□□□□□ -0.45
CCBE1-202ENST00000439986 EHD2Q9NZN4 543 aa12.22□□□□□ -0.45
CCBE1-202ENST00000439986 SRP68Q9UHB9 627 aaKnown RBP12.22□□□□□ -0.45
CCBE1-202ENST00000439986 WDR64B1ANS9 1081 aa12.22□□□□□ -0.45
CCBE1-202ENST00000439986 F8W810 466 aa12.22□□□□□ -0.45
CCBE1-202ENST00000439986 PSMA2P25787 234 aa12.22□□□□□ -0.45
CCBE1-202ENST00000439986 RNF207Q6ZRF8 634 aa12.22□□□□□ -0.45
CCBE1-202ENST00000439986 IL17RAQ96F46 866 aa12.22□□□□□ -0.45
CCBE1-202ENST00000439986 MXD3Q9BW11 206 aa12.22□□□□□ -0.45
CCBE1-202ENST00000439986 ZNF341Q9BYN7 854 aa12.22□□□□□ -0.45
CCBE1-202ENST00000439986 SMYD3Q9H7B4 428 aa12.22□□□□□ -0.45
CCBE1-202ENST00000439986 TUFT1Q9NNX1 390 aa12.22□□□□□ -0.45
CCBE1-202ENST00000439986 POTEIP0CG38 1075 aa12.22□□□□□ -0.45
CCBE1-202ENST00000439986 HNRNPH1P31943 449 aaKnown RBP12.22□□□□□ -0.45
CCBE1-202ENST00000439986 RECQLP46063 649 aaPredicted RBP12.22□□□□□ -0.45
CCBE1-202ENST00000439986 VCPP55072 806 aaKnown RBP12.22□□□□□ -0.45
CCBE1-202ENST00000439986 LRRC14Q15048 493 aa12.22□□□□□ -0.45
CCBE1-202ENST00000439986 NACC1Q96RE7 527 aa12.22□□□□□ -0.45
CCBE1-202ENST00000439986 DEPDC5O75140 1603 aa12.22□□□□□ -0.45
CCBE1-202ENST00000439986 BMP3P12645 472 aa12.21□□□□□ -0.45
CCBE1-202ENST00000439986 PEX3P56589 373 aa12.21□□□□□ -0.45
CCBE1-202ENST00000439986 PDXDC2PQ6P474 469 aa12.21□□□□□ -0.45
CCBE1-202ENST00000439986 DDX42Q86XP3 938 aaKnown RBP eCLIP12.21□□□□□ -0.45
CCBE1-202ENST00000439986 FOXP4Q8IVH2 680 aaPredicted RBP12.21□□□□□ -0.45
CCBE1-202ENST00000439986 CNKSR1Q969H4 720 aa12.21□□□□□ -0.45
CCBE1-202ENST00000439986 TBRG4Q969Z0 631 aaKnown RBP eCLIP12.21□□□□□ -0.45
CCBE1-202ENST00000439986 PLA2G12BQ9BX93 195 aa12.21□□□□□ -0.45
CCBE1-202ENST00000439986 HEMGNQ9BXL5 484 aa12.21□□□□□ -0.45
CCBE1-202ENST00000439986 ATP8B3O60423 1300 aa12.21□□□□□ -0.45
CCBE1-202ENST00000439986 EEF1DP29692 281 aaKnown RBP12.21□□□□□ -0.45
CCBE1-202ENST00000439986 BPIFB4P59827 614 aa12.21□□□□□ -0.45
CCBE1-202ENST00000439986 SCN4BQ8IWT1 228 aa12.21□□□□□ -0.45
CCBE1-202ENST00000439986 RNPC3Q96LT9 517 aaKnown RBP12.21□□□□□ -0.45
CCBE1-202ENST00000439986 FAM192AQ9GZU8 254 aa12.21□□□□□ -0.45
CCBE1-202ENST00000439986 KCND1Q9NSA2 647 aa12.21□□□□□ -0.45
CCBE1-202ENST00000439986 SESN1Q9Y6P5 492 aa12.21□□□□□ -0.45
CCBE1-202ENST00000439986 DUSP10Q9Y6W6 482 aa12.21□□□□□ -0.45
CCBE1-202ENST00000439986 PIK3C2BO00750 1634 aa12.21□□□□□ -0.45
CCBE1-202ENST00000439986 TBCCQ15814 346 aa12.21□□□□□ -0.45
CCBE1-202ENST00000439986 KLC3Q6P597 504 aa12.21□□□□□ -0.45
CCBE1-202ENST00000439986 SRRM1Q8IYB3 904 aaKnown RBP12.21□□□□□ -0.45
CCBE1-202ENST00000439986 THNSL1Q8IYQ7 743 aa12.21□□□□□ -0.45
CCBE1-202ENST00000439986 TEX9Q8N6V9 391 aa12.21□□□□□ -0.45
CCBE1-202ENST00000439986 NPHP4O75161 1426 aaPredicted RBP12.21□□□□□ -0.46
CCBE1-202ENST00000439986 PSAPP07602 524 aa12.21□□□□□ -0.46
CCBE1-202ENST00000439986 KRT74Q7RTS7 529 aa12.21□□□□□ -0.46
CCBE1-202ENST00000439986 AFG1LQ8WV93 481 aa12.21□□□□□ -0.46
CCBE1-202ENST00000439986 IPPQ9Y573 584 aa12.21□□□□□ -0.46
CCBE1-202ENST00000439986 PHF20L1A8MW92 1017 aa12.21□□□□□ -0.46
CCBE1-202ENST00000439986 PIK3R2O00459 728 aa12.21□□□□□ -0.46
CCBE1-202ENST00000439986 ZBED1O96006 694 aa12.21□□□□□ -0.46
CCBE1-202ENST00000439986 SKIP12755 728 aa12.21□□□□□ -0.46
CCBE1-202ENST00000439986 ATXN3P54252 364 aaPredicted RBP12.21□□□□□ -0.46
CCBE1-202ENST00000439986 MTMR8Q96EF0 704 aa12.21□□□□□ -0.46
CCBE1-202ENST00000439986 ZNF512BQ96KM6 892 aaPredicted RBP12.21□□□□□ -0.46
CCBE1-202ENST00000439986 PPP1R36Q96LQ0 422 aa12.21□□□□□ -0.46
CCBE1-202ENST00000439986 DNAJC7Q99615 494 aa12.21□□□□□ -0.46
CCBE1-202ENST00000439986 SCOCQ9UIL1 159 aa12.21□□□□□ -0.46
CCBE1-202ENST00000439986 MINPP1Q9UNW1 487 aa12.21□□□□□ -0.46
CCBE1-202ENST00000439986 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.2□□□□□ -0.46
CCBE1-202ENST00000439986 MAPK13O15264 365 aa12.2□□□□□ -0.46
CCBE1-202ENST00000439986 KRR1Q13601 381 aaKnown RBP12.2□□□□□ -0.46
CCBE1-202ENST00000439986 TTC17Q96AE7 1141 aa12.2□□□□□ -0.46
CCBE1-202ENST00000439986 RAB21Q9UL25 225 aa12.2□□□□□ -0.46
CCBE1-202ENST00000439986 SNTNA6NMZ2 147 aa12.2□□□□□ -0.46
CCBE1-202ENST00000439986 RAD51CO43502 376 aa12.2□□□□□ -0.46
CCBE1-202ENST00000439986 PLEKP08567 350 aaPredicted RBP12.2□□□□□ -0.46
CCBE1-202ENST00000439986 CACNB2Q08289 660 aaPredicted RBP12.2□□□□□ -0.46
CCBE1-202ENST00000439986 TRIM32Q13049 653 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms